RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 OR2L2Q8NH16 312 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 FUT8Q9BYC5 575 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 TRPS1Q9UHF7 1281 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 SPAM1P38567 509 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 GANABQ14697 944 aaKnown RBP13.03□□□□□ -0.32
NEK9-201ENST00000238616 CDK10Q15131 360 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 ANKRD52Q8NB46 1076 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 FAM46DQ8NEK8 389 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 HEXDCQ8WVB3 486 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 MTERF1Q99551 399 aaKnown RBP13.03□□□□□ -0.32
NEK9-201ENST00000238616 TESMINQ9Y4I5 508 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 WASF2Q9Y6W5 498 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 ELOA3DA6NLF2 546 aaPredicted RBP13.03□□□□□ -0.32
NEK9-201ENST00000238616 FABP3P05413 133 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 ITGAVP06756 1048 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 CDH4P55283 916 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 ELOA3BQ3SY89 546 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 BOLLQ8N9W6 283 aaKnown RBP13.03□□□□□ -0.32
NEK9-201ENST00000238616 ELOA3Q8NG57 546 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 RBM4BQ9BQ04 359 aaKnown RBP13.03□□□□□ -0.32
NEK9-201ENST00000238616 TTYH2Q9BSA4 534 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 RBM4Q9BWF3 364 aaKnown RBP13.03□□□□□ -0.32
NEK9-201ENST00000238616 PRDM12Q9H4Q4 367 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 KCTD5Q9NXV2 234 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 RAPGEFL1Q9UHV5 662 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 FBXL3Q9UKT7 428 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 ZNF536O15090 1300 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 UROSP10746 265 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 CBLP22681 906 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 CXCR1P25024 350 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 CRYBB1P53674 252 aaPredicted RBP13.03□□□□□ -0.32
NEK9-201ENST00000238616 SELENOVP59797 346 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 EFR3AQ14156 821 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 OGFOD2Q6N063 350 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 DUSP16Q9BY84 665 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 SAR1AQ9NR31 198 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 FBXO9Q9UK97 447 aaPredicted RBP13.03□□□□□ -0.32
NEK9-201ENST00000238616 TELO2Q9Y4R8 837 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 E9PAM4 449 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 PGRP06401 933 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 PTNP21246 168 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 OR10Q1Q8NGQ4 319 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 ZNF398Q8TD17 642 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 STK32AQ8WU08 396 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 PIWIL1Q96J94 861 aaKnown RBP13.03□□□□□ -0.32
NEK9-201ENST00000238616 B3GNT5Q9BYG0 378 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 GLRA2P23416 452 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 BLKP51451 505 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 RPL7AP62424 266 aaKnown RBP13.03□□□□□ -0.32
NEK9-201ENST00000238616 BNIP3Q12983 259 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 TIGD2Q4W5G0 525 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 OTOP3Q7RTS5 596 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 THEM6Q8WUY1 208 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 LRRC46Q96FV0 321 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 ANKRD27Q96NW4 1050 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 MAU2Q9Y6X3 613 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 NADKO95544 446 aaPredicted RBP13.03□□□□□ -0.32
NEK9-201ENST00000238616 ANXA4P09525 319 aaPredicted RBP13.03□□□□□ -0.32
NEK9-201ENST00000238616 GLUD2P49448 558 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 NOGQ13253 232 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 LAS2Q8IYD9 372 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 WDR12Q9GZL7 423 aaKnown RBP13.03□□□□□ -0.32
NEK9-201ENST00000238616 ERVW-1Q9UQF0 538 aa13.03□□□□□ -0.32
NEK9-201ENST00000238616 C9JVG2 144 aa13.02□□□□□ -0.32
NEK9-201ENST00000238616 TNFP01375 233 aa13.02□□□□□ -0.32
NEK9-201ENST00000238616 RLN2P04090 185 aa13.02□□□□□ -0.32
NEK9-201ENST00000238616 CSTF2P33240 577 aaKnown RBP eCLIP13.02□□□□□ -0.32
NEK9-201ENST00000238616 CYP2C18P33260 490 aa13.02□□□□□ -0.32
NEK9-201ENST00000238616 BRCC3P46736 316 aa13.02□□□□□ -0.32
NEK9-201ENST00000238616 RPS9P46781 194 aaKnown RBP13.02□□□□□ -0.32
NEK9-201ENST00000238616 TNFAIP8L3Q5GJ75 292 aa13.02□□□□□ -0.32
NEK9-201ENST00000238616 SERINC1Q9NRX5 453 aa13.02□□□□□ -0.32
NEK9-201ENST00000238616 SH3BGRL2Q9UJC5 107 aa13.02□□□□□ -0.32
NEK9-201ENST00000238616 HEBP2Q9Y5Z4 205 aa13.02□□□□□ -0.32
NEK9-201ENST00000238616 J3QRK9 145 aa13.02□□□□□ -0.32
NEK9-201ENST00000238616 PITPNM1O00562 1244 aa13.02□□□□□ -0.32
NEK9-201ENST00000238616 KAT7O95251 611 aa13.02□□□□□ -0.32
NEK9-201ENST00000238616 MYCLP1P12525 358 aaPredicted RBP13.02□□□□□ -0.32
NEK9-201ENST00000238616 CLCNKBP51801 687 aa13.02□□□□□ -0.32
NEK9-201ENST00000238616 TARDBPQ13148 414 aaKnown RBP eCLIP13.02□□□□□ -0.32
NEK9-201ENST00000238616 FOXR2Q6PJQ5 311 aa13.02□□□□□ -0.32
NEK9-201ENST00000238616 SPATC1Q76KD6 591 aa13.02□□□□□ -0.32
NEK9-201ENST00000238616 CAND1Q86VP6 1230 aaKnown RBP13.02□□□□□ -0.32
NEK9-201ENST00000238616 CDH19Q9H159 772 aa13.02□□□□□ -0.32
NEK9-201ENST00000238616 LSM1O15116 133 aaKnown RBP13.02□□□□□ -0.32
NEK9-201ENST00000238616 USP30Q70CQ3 517 aa13.02□□□□□ -0.32
NEK9-201ENST00000238616 ATXN2LQ8WWM7 1075 aaKnown RBP13.02□□□□□ -0.32
NEK9-201ENST00000238616 LYARQ9NX58 379 aaKnown RBP13.02□□□□□ -0.32
NEK9-201ENST00000238616 DKKL1Q9UK85 242 aa13.02□□□□□ -0.32
NEK9-201ENST00000238616 ATP5A1P25705 553 aaKnown RBP13.02□□□□□ -0.33
NEK9-201ENST00000238616 KIR3DL1P43629 444 aa13.02□□□□□ -0.33
NEK9-201ENST00000238616 AKAP1Q92667 903 aaKnown RBP eCLIP13.02□□□□□ -0.33
NEK9-201ENST00000238616 CAVIN3Q969G5 261 aa13.02□□□□□ -0.33
NEK9-201ENST00000238616 ABCB8Q9NUT2 735 aa13.02□□□□□ -0.33
NEK9-201ENST00000238616 CD2P06729 351 aa13.02□□□□□ -0.33
NEK9-201ENST00000238616 MATKP42679 507 aa13.02□□□□□ -0.33
NEK9-201ENST00000238616 OR12D2P58182 307 aa13.02□□□□□ -0.33
NEK9-201ENST00000238616 SLC10A7Q0GE19 358 aa13.02□□□□□ -0.33
NEK9-201ENST00000238616 ZNF792Q3KQV3 632 aa13.02□□□□□ -0.33
NEK9-201ENST00000238616 ADNP2Q6IQ32 1131 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms