RNA–Protein interactions for RNA: ENST00000237889.8

NDUFB3-201, Transcript of NADH:ubiquinone oxidoreductase subunit B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFB3, Length 755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3-201ENST00000237889 MARC1Q5VT66 337 aa9.33□□□□□ -0.92
NDUFB3-201ENST00000237889 C1orf189Q5VU69 101 aa9.33□□□□□ -0.92
NDUFB3-201ENST00000237889 ZNF385CQ66K41 422 aaPredicted RBP9.33□□□□□ -0.92
NDUFB3-201ENST00000237889 PDPK2PQ6A1A2 396 aa9.33□□□□□ -0.92
NDUFB3-201ENST00000237889 Q6ZPB1 254 aaPredicted RBP9.33□□□□□ -0.92
NDUFB3-201ENST00000237889 NOP9Q86U38 636 aaKnown RBP9.33□□□□□ -0.92
NDUFB3-201ENST00000237889 DMRTC2Q8IXT2 367 aaPredicted RBP9.33□□□□□ -0.92
NDUFB3-201ENST00000237889 KBTBD2Q8IY47 623 aa9.33□□□□□ -0.92
NDUFB3-201ENST00000237889 CLYBLQ8N0X4 340 aa9.33□□□□□ -0.92
NDUFB3-201ENST00000237889 MYRIPQ8NFW9 859 aa9.33□□□□□ -0.92
NDUFB3-201ENST00000237889 GOT1L1Q8NHS2 421 aaPredicted RBP9.33□□□□□ -0.92
NDUFB3-201ENST00000237889 ASB5Q8WWX0 329 aa9.33□□□□□ -0.92
NDUFB3-201ENST00000237889 NRGNQ92686 78 aa9.33□□□□□ -0.92
NDUFB3-201ENST00000237889 SMR3AQ99954 134 aa9.33□□□□□ -0.92
NDUFB3-201ENST00000237889 MGME1Q9BQP7 344 aa9.33□□□□□ -0.92
NDUFB3-201ENST00000237889 BPIFA3Q9BQP9 254 aa9.33□□□□□ -0.92
NDUFB3-201ENST00000237889 POLDIP3Q9BY77 421 aaKnown RBP9.33□□□□□ -0.92
NDUFB3-201ENST00000237889 RAB6CQ9H0N0 254 aa9.33□□□□□ -0.92
NDUFB3-201ENST00000237889 GANQ9H2C0 597 aa9.33□□□□□ -0.92
NDUFB3-201ENST00000237889 KCNJ16Q9NPI9 418 aa9.33□□□□□ -0.92
NDUFB3-201ENST00000237889 FZD10Q9ULW2 581 aa9.33□□□□□ -0.92
NDUFB3-201ENST00000237889 PPT2Q9UMR5 302 aa9.33□□□□□ -0.92
NDUFB3-201ENST00000237889 COLEC10Q9Y6Z7 277 aa9.33□□□□□ -0.92
NDUFB3-201ENST00000237889 C1orf232A0A0U1RR37 186 aa9.32□□□□□ -0.92
NDUFB3-201ENST00000237889 GPR37O15354 613 aa9.32□□□□□ -0.92
NDUFB3-201ENST00000237889 KLHL18O94889 574 aa9.32□□□□□ -0.92
NDUFB3-201ENST00000237889 ZRANB2O95218 330 aaKnown RBP eCLIP9.32□□□□□ -0.92
NDUFB3-201ENST00000237889 TSPAN12O95859 305 aa9.32□□□□□ -0.92
NDUFB3-201ENST00000237889 UMODP07911 640 aa9.32□□□□□ -0.92
NDUFB3-201ENST00000237889 MMEP08473 750 aa9.32□□□□□ -0.92
NDUFB3-201ENST00000237889 CBSLP0DN79 551 aa9.32□□□□□ -0.92
NDUFB3-201ENST00000237889 ABOP16442 354 aa9.32□□□□□ -0.92
NDUFB3-201ENST00000237889 CBSP35520 551 aa9.32□□□□□ -0.92
NDUFB3-201ENST00000237889 SPAM1P38567 509 aa9.32□□□□□ -0.92
NDUFB3-201ENST00000237889 KPNA2P52292 529 aaKnown RBP9.32□□□□□ -0.92
NDUFB3-201ENST00000237889 RPL26P61254 145 aaKnown RBP9.32□□□□□ -0.92
NDUFB3-201ENST00000237889 AP2B1P63010 937 aa9.32□□□□□ -0.92
NDUFB3-201ENST00000237889 PTPRRQ15256 657 aa9.32□□□□□ -0.92
NDUFB3-201ENST00000237889 ZNF789Q5FWF6 425 aa9.32□□□□□ -0.92
NDUFB3-201ENST00000237889 SWT1Q5T5J6 900 aaKnown RBP9.32□□□□□ -0.92
NDUFB3-201ENST00000237889 NAA35Q5VZE5 725 aa9.32□□□□□ -0.92
NDUFB3-201ENST00000237889 MRPL14Q6P1L8 145 aaKnown RBP9.32□□□□□ -0.92
NDUFB3-201ENST00000237889 TLDC1Q6P9B6 456 aa9.32□□□□□ -0.92
NDUFB3-201ENST00000237889 ADGRG6Q86SQ4 1221 aa9.32□□□□□ -0.92
NDUFB3-201ENST00000237889 AMZ2Q86W34 360 aa9.32□□□□□ -0.92
NDUFB3-201ENST00000237889 TRAPPC5Q8IUR0 188 aa9.32□□□□□ -0.92
NDUFB3-201ENST00000237889 GLYATL1Q969I3 302 aa9.32□□□□□ -0.92
NDUFB3-201ENST00000237889 MBD6Q96DN6 1003 aa9.32□□□□□ -0.92
NDUFB3-201ENST00000237889 NSMCE3Q96MG7 304 aa9.32□□□□□ -0.92
NDUFB3-201ENST00000237889 SELENOOQ9BVL4 669 aa9.32□□□□□ -0.92
NDUFB3-201ENST00000237889 ZNF395Q9H8N7 513 aaPredicted RBP9.32□□□□□ -0.92
NDUFB3-201ENST00000237889 ARFGAP3Q9NP61 516 aa9.32□□□□□ -0.92
NDUFB3-201ENST00000237889 IMP3Q9NV31 184 aaKnown RBP9.32□□□□□ -0.92
NDUFB3-201ENST00000237889 IRAK4Q9NWZ3 460 aa9.32□□□□□ -0.92
NDUFB3-201ENST00000237889 NXT1Q9UKK6 140 aaKnown RBP9.32□□□□□ -0.92
NDUFB3-201ENST00000237889 RPL26L1Q9UNX3 145 aaKnown RBP9.32□□□□□ -0.92
NDUFB3-201ENST00000237889 ZNF835Q9Y2P0 537 aa9.32□□□□□ -0.92
NDUFB3-201ENST00000237889 EPHB6O15197 1021 aa9.31□□□□□ -0.92
NDUFB3-201ENST00000237889 DDX3YO15523 660 aaKnown RBP9.31□□□□□ -0.92
NDUFB3-201ENST00000237889 ALBP02768 609 aa9.31□□□□□ -0.92
NDUFB3-201ENST00000237889 PDHA1P08559 390 aa9.31□□□□□ -0.92
NDUFB3-201ENST00000237889 HOXD4P09016 255 aaPredicted RBP9.31□□□□□ -0.92
NDUFB3-201ENST00000237889 CCDC172P0C7W6 258 aa9.31□□□□□ -0.92
NDUFB3-201ENST00000237889 IGFBP2P18065 325 aa9.31□□□□□ -0.92
NDUFB3-201ENST00000237889 POLR2CP19387 275 aaPredicted RBP9.31□□□□□ -0.92
NDUFB3-201ENST00000237889 HLA-DPA1P20036 260 aa9.31□□□□□ -0.92
NDUFB3-201ENST00000237889 IL4RP24394 825 aa9.31□□□□□ -0.92
NDUFB3-201ENST00000237889 NDUFS1P28331 727 aa9.31□□□□□ -0.92
NDUFB3-201ENST00000237889 PCSK6P29122 969 aa9.31□□□□□ -0.92
NDUFB3-201ENST00000237889 MMP13P45452 471 aa9.31□□□□□ -0.92
NDUFB3-201ENST00000237889 NSFP46459 744 aaKnown RBP9.31□□□□□ -0.92
NDUFB3-201ENST00000237889 ZNF135P52742 658 aaPredicted RBP9.31□□□□□ -0.92
NDUFB3-201ENST00000237889 RBBP7Q16576 425 aa9.31□□□□□ -0.92
NDUFB3-201ENST00000237889 TMEM211Q6ICI0 200 aa9.31□□□□□ -0.92
NDUFB3-201ENST00000237889 KIRREL2Q6UWL6 708 aa9.31□□□□□ -0.92
NDUFB3-201ENST00000237889 ZNF677Q86XU0 584 aa9.31□□□□□ -0.92
NDUFB3-201ENST00000237889 BRSK1Q8TDC3 778 aa9.31□□□□□ -0.92
NDUFB3-201ENST00000237889 SLC20A1Q8WUM9 679 aa9.31□□□□□ -0.92
NDUFB3-201ENST00000237889 LYSMD1Q96S90 227 aa9.31□□□□□ -0.92
NDUFB3-201ENST00000237889 XPO4Q9C0E2 1151 aaKnown RBP9.31□□□□□ -0.92
NDUFB3-201ENST00000237889 WDR54Q9H977 334 aa9.31□□□□□ -0.92
NDUFB3-201ENST00000237889 POMT2Q9UKY4 750 aa9.31□□□□□ -0.92
NDUFB3-201ENST00000237889 CDYLQ9Y232 598 aa9.31□□□□□ -0.92
NDUFB3-201ENST00000237889 WDR37Q9Y2I8 494 aa9.31□□□□□ -0.92
NDUFB3-201ENST00000237889 FN1P02751 2386 aaKnown RBP9.31□□□□□ -0.92
NDUFB3-201ENST00000237889 MDC1Q14676 2089 aaKnown RBP9.3□□□□□ -0.92
NDUFB3-201ENST00000237889 PIKFYVEQ9Y2I7 2098 aa9.3□□□□□ -0.92
NDUFB3-201ENST00000237889 DOCK4Q8N1I0 1966 aa9.3□□□□□ -0.92
NDUFB3-201ENST00000237889 CNTRLQ7Z7A1 2325 aa9.3□□□□□ -0.92
NDUFB3-201ENST00000237889 RNF212BA8MTL3 300 aa9.3□□□□□ -0.92
NDUFB3-201ENST00000237889 FAM227AF5H4B4 570 aa9.3□□□□□ -0.92
NDUFB3-201ENST00000237889 SOCS6O14544 535 aa9.3□□□□□ -0.92
NDUFB3-201ENST00000237889 PROM1O43490 865 aa9.3□□□□□ -0.92
NDUFB3-201ENST00000237889 FZD6O60353 706 aa9.3□□□□□ -0.92
NDUFB3-201ENST00000237889 WFS1O76024 890 aa9.3□□□□□ -0.92
NDUFB3-201ENST00000237889 PRAMEF1O95521 474 aa9.3□□□□□ -0.92
NDUFB3-201ENST00000237889 HPP00738 406 aa9.3□□□□□ -0.92
NDUFB3-201ENST00000237889 MTHFD1P11586 935 aaKnown RBP9.3□□□□□ -0.92
NDUFB3-201ENST00000237889 ERCC2P18074 760 aa9.3□□□□□ -0.92
NDUFB3-201ENST00000237889 ALAS2P22557 587 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms