RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 hCG_2039718K7EN88 272 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 HCN1O60741 890 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 CNTN5O94779 1100 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 GSTM1P09488 218 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 CHI3L1P36222 383 aaPredicted RBP12.68□□□□□ -0.38
VAMP4-201ENST00000236192 ZNF132P52740 706 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 MTPNP58546 118 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 CTBP1Q13363 440 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 RNASE12Q5GAN4 147 aaKnown RBP12.68□□□□□ -0.38
VAMP4-201ENST00000236192 GPRIN3Q6ZVF9 776 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 FAM131BQ86XD5 332 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 GPALPP1Q8IXQ4 340 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 MINDY1Q8N5J2 469 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 NIPA2Q8N8Q9 360 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 JOSD2Q8TAC2 188 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 CEP76Q8TAP6 659 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 MFSD14AQ96MC6 490 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 OR52E6Q96RD3 313 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 APOL5Q9BWW9 433 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 NYAP2Q9P242 653 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 A0A1B0GTW7 788 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 TP73O15350 636 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 EGFRP00533 1210 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 GH2P01242 217 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 CDK1P06493 297 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 PPP3R1P63098 170 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 OR9I1Q8NGQ6 314 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 BCL7CQ8WUZ0 217 aaPredicted RBP12.68□□□□□ -0.38
VAMP4-201ENST00000236192 SMG7Q92540 1137 aaKnown RBP12.68□□□□□ -0.38
VAMP4-201ENST00000236192 ZNF578Q96N58 590 aaPredicted RBP12.68□□□□□ -0.38
VAMP4-201ENST00000236192 CATSPERBQ9H7T0 1116 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 EIF2B3Q9NR50 452 aaKnown RBP12.68□□□□□ -0.38
VAMP4-201ENST00000236192 SLC17A6Q9P2U8 582 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 PLEKHA6Q9Y2H5 1048 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 BAZ2BQ9UIF8 2168 aaKnown RBP12.68□□□□□ -0.38
VAMP4-201ENST00000236192 MYH15Q9Y2K3 1946 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 C1orf196B1AJZ1 125 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 M0QYT0 321 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 TNFRSF11BO00300 401 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 NRP1O14786 923 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 PMM2O15305 246 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 CD2P06729 351 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 HIST1H2AGP0C0S8 130 aaPredicted RBP12.68□□□□□ -0.38
VAMP4-201ENST00000236192 HIST1H2ADP20671 130 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 PRKACGP22612 351 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 DNAJB1P25685 340 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 FAUP35544 74 aaKnown RBP12.68□□□□□ -0.38
VAMP4-201ENST00000236192 HNF1BP35680 557 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 LAPTM5Q13571 262 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 VEPH1Q14D04 833 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 UAP1L1Q3KQV9 507 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 PKN3Q6P5Z2 889 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 ZNF782Q6ZMW2 699 aaPredicted RBP12.68□□□□□ -0.38
VAMP4-201ENST00000236192 TOMM5Q8N4H5 51 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 GATAD2BQ8WXI9 593 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 SLC7A6Q92536 515 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 HIST1H2AHQ96KK5 128 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 HIST1H2AJQ99878 128 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 H2AFJQ9BTM1 129 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 SLC2A11Q9BYW1 496 aa12.68□□□□□ -0.38
VAMP4-201ENST00000236192 ZNF197O14709 1029 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 PROM1O43490 865 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 ACSL1P33121 698 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 GMPRP36959 345 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 UGT2B15P54855 530 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 IQCCQ4KMZ1 466 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 PAPD5Q8NDF8 572 aaKnown RBP12.67□□□□□ -0.38
VAMP4-201ENST00000236192 SLC22A17Q8WUG5 538 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 TTC9Q92623 222 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 PABPC5Q96DU9 382 aaKnown RBP12.67□□□□□ -0.38
VAMP4-201ENST00000236192 SERPINB11Q96P15 392 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 BARD1Q99728 777 aaKnown RBP12.67□□□□□ -0.38
VAMP4-201ENST00000236192 MCCC2Q9HCC0 563 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 TREM1Q9NP99 234 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 NLKQ9UBE8 527 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 M0R2N6 131 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 CHST10O43529 356 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 UGT2B17O75795 530 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 ARIH2O95376 493 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 HLA-EP13747 358 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 PAICSP22234 425 aaKnown RBP12.67□□□□□ -0.38
VAMP4-201ENST00000236192 BRCC3P46736 316 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 RARRES1P49788 294 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 PTSQ03393 145 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 RGS1Q08116 209 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 HSPA14Q0VDF9 509 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 UGT8Q16880 541 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 GPRC6AQ5T6X5 926 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 ALG1LQ6GMV1 187 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 SCIMPQ6UWF3 145 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 SPPL2BQ8TCT7 592 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 FAM167AQ96KS9 214 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 FEM1BQ9UK73 627 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 TMPRSS11EQ9UL52 423 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 MGAT4BQ9UQ53 548 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 AKT3Q9Y243 479 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 PRELID3BQ9Y3B1 194 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 MYH13Q9UKX3 1938 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 REM1O75628 298 aa12.67□□□□□ -0.38
VAMP4-201ENST00000236192 GUCA1CO95843 209 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms