RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 ELOCQ15369 112 aa13.72□□□□□ -0.21
SEC61B-201ENST00000223641 OR4D1Q15615 310 aa13.72□□□□□ -0.21
SEC61B-201ENST00000223641 PPP1R3AQ16821 1122 aa13.72□□□□□ -0.21
SEC61B-201ENST00000223641 UAP1L1Q3KQV9 507 aa13.72□□□□□ -0.21
SEC61B-201ENST00000223641 CCDC153Q494R4 210 aa13.72□□□□□ -0.21
SEC61B-201ENST00000223641 PRAMEF14Q5SWL7 426 aa13.72□□□□□ -0.21
SEC61B-201ENST00000223641 N4BP2L1Q5TBK1 243 aaPredicted RBP13.72□□□□□ -0.21
SEC61B-201ENST00000223641 KLC3Q6P597 504 aa13.72□□□□□ -0.21
SEC61B-201ENST00000223641 IL27RAQ6UWB1 636 aa13.72□□□□□ -0.21
SEC61B-201ENST00000223641 KANSL1Q7Z3B3 1105 aa13.72□□□□□ -0.21
SEC61B-201ENST00000223641 FBXO15Q8NCQ5 510 aaPredicted RBP13.72□□□□□ -0.21
SEC61B-201ENST00000223641 SPDYE1Q8NFV5 336 aaPredicted RBP13.72□□□□□ -0.21
SEC61B-201ENST00000223641 DLG3Q92796 817 aa13.72□□□□□ -0.21
SEC61B-201ENST00000223641 RMDN2Q96LZ7 410 aa13.72□□□□□ -0.21
SEC61B-201ENST00000223641 ATOH8Q96SQ7 321 aa13.72□□□□□ -0.21
SEC61B-201ENST00000223641 MRPL57Q9BQC6 102 aaKnown RBP13.72□□□□□ -0.21
SEC61B-201ENST00000223641 SLC12A9Q9BXP2 914 aa13.72□□□□□ -0.21
SEC61B-201ENST00000223641 ARRDC1-AS1Q9H2J1 176 aa13.72□□□□□ -0.21
SEC61B-201ENST00000223641 SPASTQ9UBP0 616 aa13.72□□□□□ -0.21
SEC61B-201ENST00000223641 RAB23Q9ULC3 237 aa13.72□□□□□ -0.21
SEC61B-201ENST00000223641 CSNK1G3Q9Y6M4 447 aa13.72□□□□□ -0.21
SEC61B-201ENST00000223641 TMEM120BA0PK00 339 aa13.71□□□□□ -0.21
SEC61B-201ENST00000223641 LMO7DNF2Z398 122 aa13.71□□□□□ -0.21
SEC61B-201ENST00000223641 ARHGAP33O14559 1287 aa13.71□□□□□ -0.21
SEC61B-201ENST00000223641 AQP9O43315 295 aa13.71□□□□□ -0.21
SEC61B-201ENST00000223641 ZWINTO95229 277 aa13.71□□□□□ -0.21
SEC61B-201ENST00000223641 EML2O95834 649 aa13.71□□□□□ -0.21
SEC61B-201ENST00000223641 CFIP05156 583 aa13.71□□□□□ -0.21
SEC61B-201ENST00000223641 C8GP07360 202 aa13.71□□□□□ -0.21
SEC61B-201ENST00000223641 RETP07949 1114 aa13.71□□□□□ -0.21
SEC61B-201ENST00000223641 RBP1P09455 135 aa13.71□□□□□ -0.21
SEC61B-201ENST00000223641 DHRS4L1P0CG22 281 aa13.71□□□□□ -0.21
SEC61B-201ENST00000223641 F3P13726 295 aa13.71□□□□□ -0.21
SEC61B-201ENST00000223641 MTHFD2P13995 350 aa13.71□□□□□ -0.21
SEC61B-201ENST00000223641 RPL10P27635 214 aaKnown RBP13.71□□□□□ -0.21
SEC61B-201ENST00000223641 NBL1P41271 181 aa13.71□□□□□ -0.21
SEC61B-201ENST00000223641 GLRBP48167 497 aa13.71□□□□□ -0.21
SEC61B-201ENST00000223641 PPP2R2AP63151 447 aa13.71□□□□□ -0.21
SEC61B-201ENST00000223641 SP140Q13342 867 aa13.71□□□□□ -0.21
SEC61B-201ENST00000223641 TSNQ15631 228 aaKnown RBP13.71□□□□□ -0.21
SEC61B-201ENST00000223641 TRIM61Q5EBN2 209 aa13.71□□□□□ -0.21
SEC61B-201ENST00000223641 C16orf46Q6P387 395 aa13.71□□□□□ -0.21
SEC61B-201ENST00000223641 SLC30A9Q6PML9 568 aa13.71□□□□□ -0.21
SEC61B-201ENST00000223641 UNC5DQ6UXZ4 953 aa13.71□□□□□ -0.21
SEC61B-201ENST00000223641 ADAMTSL2Q86TH1 951 aa13.71□□□□□ -0.21
SEC61B-201ENST00000223641 ZNF548Q8NEK5 533 aaPredicted RBP13.71□□□□□ -0.21
SEC61B-201ENST00000223641 STAG3L4Q8TBR4 150 aa13.71□□□□□ -0.21
SEC61B-201ENST00000223641 TFGQ92734 400 aaPredicted RBP13.71□□□□□ -0.21
SEC61B-201ENST00000223641 TSNARE1Q96NA8 513 aa13.71□□□□□ -0.21
SEC61B-201ENST00000223641 INSM2Q96T92 566 aaPredicted RBP13.71□□□□□ -0.21
SEC61B-201ENST00000223641 UNKQ9C0B0 810 aaKnown RBP13.71□□□□□ -0.21
SEC61B-201ENST00000223641 WWP1Q9H0M0 922 aa13.71□□□□□ -0.21
SEC61B-201ENST00000223641 MRPL46Q9H2W6 279 aaKnown RBP13.71□□□□□ -0.21
SEC61B-201ENST00000223641 C12orf65Q9H3J6 166 aaKnown RBP13.71□□□□□ -0.21
SEC61B-201ENST00000223641 OSGEPL1Q9H4B0 414 aa13.71□□□□□ -0.21
SEC61B-201ENST00000223641 RDH14Q9HBH5 336 aa13.71□□□□□ -0.21
SEC61B-201ENST00000223641 PRDM8Q9NQV8 689 aa13.71□□□□□ -0.21
SEC61B-201ENST00000223641 TAAR2Q9P1P5 351 aa13.71□□□□□ -0.21
SEC61B-201ENST00000223641 SLC17A7Q9P2U7 560 aa13.71□□□□□ -0.21
SEC61B-201ENST00000223641 ADAMTS6Q9UKP5 1117 aa13.71□□□□□ -0.21
SEC61B-201ENST00000223641 TK2O00142 265 aa13.7□□□□□ -0.22
SEC61B-201ENST00000223641 BTN3A1O00481 513 aa13.7□□□□□ -0.22
SEC61B-201ENST00000223641 DLL1O00548 723 aa13.7□□□□□ -0.22
SEC61B-201ENST00000223641 KERAO60938 352 aa13.7□□□□□ -0.22
SEC61B-201ENST00000223641 C1orf105O95561 183 aa13.7□□□□□ -0.22
SEC61B-201ENST00000223641 SYPP08247 313 aa13.7□□□□□ -0.22
SEC61B-201ENST00000223641 ENO2P09104 434 aaPredicted RBP13.7□□□□□ -0.22
SEC61B-201ENST00000223641 SLC35G4P0C7Q5 338 aa13.7□□□□□ -0.22
SEC61B-201ENST00000223641 GIMD1P0DJR0 217 aa13.7□□□□□ -0.22
SEC61B-201ENST00000223641 NR1D1P20393 614 aa13.7□□□□□ -0.22
SEC61B-201ENST00000223641 ARRB1P49407 418 aaPredicted RBP13.7□□□□□ -0.22
SEC61B-201ENST00000223641 IRX4P78413 519 aa13.7□□□□□ -0.22
SEC61B-201ENST00000223641 ABRQ12979 859 aa13.7□□□□□ -0.22
SEC61B-201ENST00000223641 BNIP3Q12983 259 aa13.7□□□□□ -0.22
SEC61B-201ENST00000223641 C1orf61Q13536 156 aa13.7□□□□□ -0.22
SEC61B-201ENST00000223641 HLA-BQ31612 363 aa13.7□□□□□ -0.22
SEC61B-201ENST00000223641 IYDQ6PHW0 289 aa13.7□□□□□ -0.22
SEC61B-201ENST00000223641 TAF8Q7Z7C8 310 aa13.7□□□□□ -0.22
SEC61B-201ENST00000223641 GKN2Q86XP6 184 aa13.7□□□□□ -0.22
SEC61B-201ENST00000223641 SLC25A45Q8N413 288 aa13.7□□□□□ -0.22
SEC61B-201ENST00000223641 FAM111AQ96PZ2 611 aa13.7□□□□□ -0.22
SEC61B-201ENST00000223641 ALG9Q9H6U8 611 aa13.7□□□□□ -0.22
SEC61B-201ENST00000223641 PARVBQ9HBI1 364 aa13.7□□□□□ -0.22
SEC61B-201ENST00000223641 KCNK9Q9NPC2 374 aa13.7□□□□□ -0.22
SEC61B-201ENST00000223641 SCHIP1Q9P0W5 487 aaPredicted RBP13.7□□□□□ -0.22
SEC61B-201ENST00000223641 XPR1Q9UBH6 696 aa13.7□□□□□ -0.22
SEC61B-201ENST00000223641 PSMD13Q9UNM6 376 aa13.7□□□□□ -0.22
SEC61B-201ENST00000223641 PDE10AQ9Y233 779 aa13.7□□□□□ -0.22
SEC61B-201ENST00000223641 OARD1Q9Y530 152 aa13.7□□□□□ -0.22
SEC61B-201ENST00000223641 FRYLO94915 3013 aa13.7□□□□□ -0.22
SEC61B-201ENST00000223641 RALGAPA1Q6GYQ0 2036 aa13.69□□□□□ -0.22
SEC61B-201ENST00000223641 NPEPPSL1A6NEC2 478 aa13.69□□□□□ -0.22
SEC61B-201ENST00000223641 OR5K4A6NMS3 321 aa13.69□□□□□ -0.22
SEC61B-201ENST00000223641 PDZK1P1A8MUH7 402 aa13.69□□□□□ -0.22
SEC61B-201ENST00000223641 G3V2L1 256 aa13.69□□□□□ -0.22
SEC61B-201ENST00000223641 IFRD1O00458 451 aaPredicted RBP13.69□□□□□ -0.22
SEC61B-201ENST00000223641 YY2O15391 372 aa13.69□□□□□ -0.22
SEC61B-201ENST00000223641 YKT6O15498 198 aa13.69□□□□□ -0.22
SEC61B-201ENST00000223641 KLK8O60259 260 aa13.69□□□□□ -0.22
SEC61B-201ENST00000223641 XRCC1P18887 633 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms