RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 CCM2Q9BSQ5 444 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 RTKNQ9BST9 563 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 TAPBPLQ9BX59 468 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 LRMDAQ9H2I8 198 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 KCTD3Q9Y597 815 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 PLIN3O60664 434 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 TMED10P49755 219 aaKnown RBP18.15■□□□□ 0.5
CLIP2-201ENST00000223398 GPR33Q49SQ1 333 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 PITRM1Q5JRX3 1037 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 PEX5LQ8IYB4 626 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 NCSTNQ92542 709 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 PAIP1Q9H074 479 aaKnown RBP18.15■□□□□ 0.5
CLIP2-201ENST00000223398 NEMP2A6NFY4 417 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 RFPL2O75678 378 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 ANPEPP15144 967 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 TYRP1P17643 537 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 CLDN19Q8N6F1 224 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 RAB11FIP5Q9BXF6 653 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 KCNN2Q9H2S1 579 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 PDP1Q9P0J1 537 aaPredicted RBP18.15■□□□□ 0.5
CLIP2-201ENST00000223398 TAC3Q9UHF0 121 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 ZNF180Q9UJW8 692 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 PPM1HQ9ULR3 514 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 CA14Q9ULX7 337 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 PLAGL1Q9UM63 463 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 SPATA2Q9UM82 520 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 TGDSO95455 350 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 ZNF865P0CJ78 1059 aaPredicted RBP18.15■□□□□ 0.5
CLIP2-201ENST00000223398 MTHFRP42898 656 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 CTSKP43235 329 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 MED22Q15528 200 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 MPP4Q96JB8 637 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 TCRBV21S2A2A0A5A6 115 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 PSMD11O00231 422 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 UBXN7O94888 489 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 CCKBRP32239 447 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 CCR8P51685 355 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.15■□□□□ 0.5
CLIP2-201ENST00000223398 TRIM74Q86UV6 250 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 ENKURQ8TC29 256 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 SH3GL3Q99963 347 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 P2RY13Q9BPV8 354 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 YIPF4Q9BSR8 244 aa18.15■□□□□ 0.5
CLIP2-201ENST00000223398 PIRO00625 290 aa18.14■□□□□ 0.49
CLIP2-201ENST00000223398 ATP1B2P14415 290 aaPredicted RBP18.14■□□□□ 0.49
CLIP2-201ENST00000223398 TAS2R50P59544 299 aa18.14■□□□□ 0.49
CLIP2-201ENST00000223398 SOX4Q06945 474 aaPredicted RBP18.14■□□□□ 0.49
CLIP2-201ENST00000223398 DTNBP1Q96EV8 351 aa18.14■□□□□ 0.49
CLIP2-201ENST00000223398 FAM86C2PA6NEL3 165 aa18.14■□□□□ 0.49
CLIP2-201ENST00000223398 NDUFS4O43181 175 aa18.14■□□□□ 0.49
CLIP2-201ENST00000223398 OGDHQ02218 1023 aa18.14■□□□□ 0.49
CLIP2-201ENST00000223398 INAVAQ3KP66 663 aa18.14■□□□□ 0.49
CLIP2-201ENST00000223398 TNFAIP8L2Q6P589 184 aaPredicted RBP18.14■□□□□ 0.49
CLIP2-201ENST00000223398 SMG8Q8ND04 991 aaKnown RBP18.14■□□□□ 0.49
CLIP2-201ENST00000223398 TRAPPC9Q96Q05 1148 aa18.14■□□□□ 0.49
CLIP2-201ENST00000223398 RNPEPL1Q9HAU8 725 aa18.14■□□□□ 0.49
CLIP2-201ENST00000223398 CTPS2Q9NRF8 586 aa18.14■□□□□ 0.49
CLIP2-201ENST00000223398 ZNF358Q9NW07 568 aa18.14■□□□□ 0.49
CLIP2-201ENST00000223398 DAPK2Q9UIK4 370 aa18.14■□□□□ 0.49
CLIP2-201ENST00000223398 PDPK1O15530 556 aa18.14■□□□□ 0.49
CLIP2-201ENST00000223398 NCBP2P52298 156 aaKnown RBP eCLIP18.14■□□□□ 0.49
CLIP2-201ENST00000223398 SRP54P61011 504 aaKnown RBP18.14■□□□□ 0.49
CLIP2-201ENST00000223398 PCBP2Q15366 365 aaKnown RBP eCLIP18.14■□□□□ 0.493e-7■■■■□ 21
CLIP2-201ENST00000223398 QPCTQ16769 361 aa18.14■□□□□ 0.49
CLIP2-201ENST00000223398 LDLRAD1Q5T700 205 aa18.14■□□□□ 0.49
CLIP2-201ENST00000223398 HPS6Q86YV9 775 aa18.14■□□□□ 0.49
CLIP2-201ENST00000223398 UBASH3BQ8TF42 649 aa18.14■□□□□ 0.49
CLIP2-201ENST00000223398 RASSF1Q9NS23 344 aa18.14■□□□□ 0.49
CLIP2-201ENST00000223398 C1orf109Q9NX04 203 aa18.14■□□□□ 0.49
CLIP2-201ENST00000223398 EHD3Q9NZN3 535 aa18.14■□□□□ 0.49
CLIP2-201ENST00000223398 CNTN6Q9UQ52 1028 aa18.14■□□□□ 0.49
CLIP2-201ENST00000223398 ELOVL7A1L3X0 281 aa18.14■□□□□ 0.49
CLIP2-201ENST00000223398 ANKRD66B4E2M5 251 aa18.14■□□□□ 0.49
CLIP2-201ENST00000223398 TOP3AQ13472 1001 aaPredicted RBP18.14■□□□□ 0.49
CLIP2-201ENST00000223398 SUZ12Q15022 739 aaKnown RBP18.14■□□□□ 0.49
CLIP2-201ENST00000223398 TIMM50Q3ZCQ8 353 aa18.14■□□□□ 0.49
CLIP2-201ENST00000223398 ABRAXAS1Q6UWZ7 409 aa18.14■□□□□ 0.49
CLIP2-201ENST00000223398 SLC22A18Q96BI1 424 aa18.14■□□□□ 0.49
CLIP2-201ENST00000223398 ARMC5Q96C12 935 aa18.14■□□□□ 0.49
CLIP2-201ENST00000223398 CLPTM1LQ96KA5 538 aa18.14■□□□□ 0.49
CLIP2-201ENST00000223398 KCNS3Q9BQ31 491 aa18.14■□□□□ 0.49
CLIP2-201ENST00000223398 GSDMCQ9BYG8 508 aa18.14■□□□□ 0.49
CLIP2-201ENST00000223398 DBTP11182 482 aaKnown RBP18.13■□□□□ 0.49
CLIP2-201ENST00000223398 CD247P20963 164 aa18.13■□□□□ 0.49
CLIP2-201ENST00000223398 FCRL4Q96PJ5 515 aa18.13■□□□□ 0.49
CLIP2-201ENST00000223398 MIPEPQ99797 713 aa18.13■□□□□ 0.49
CLIP2-201ENST00000223398 CXorf56Q9H5V9 222 aa18.13■□□□□ 0.49
CLIP2-201ENST00000223398 CMTM6Q9NX76 183 aa18.13■□□□□ 0.49
CLIP2-201ENST00000223398 CLCA3PQ9Y6N3 262 aa18.13■□□□□ 0.49
CLIP2-201ENST00000223398 C9J4A7 227 aa18.13■□□□□ 0.49
CLIP2-201ENST00000223398 K7EPI3 171 aa18.13■□□□□ 0.49
CLIP2-201ENST00000223398 HAS3O00219 553 aa18.13■□□□□ 0.49
CLIP2-201ENST00000223398 KDELR3O43731 214 aa18.13■□□□□ 0.49
CLIP2-201ENST00000223398 HKDC1Q2TB90 917 aa18.13■□□□□ 0.49
CLIP2-201ENST00000223398 C14orf80Q86SX3 495 aa18.13■□□□□ 0.49
CLIP2-201ENST00000223398 PRDM8Q9NQV8 689 aa18.13■□□□□ 0.49
CLIP2-201ENST00000223398 DZANK1Q9NVP4 752 aa18.13■□□□□ 0.49
CLIP2-201ENST00000223398 SPATA6Q9NWH7 488 aaPredicted RBP18.13■□□□□ 0.49
CLIP2-201ENST00000223398 ZNF142P52746 1687 aaPredicted RBP18.13■□□□□ 0.49
CLIP2-201ENST00000223398 AGXTP21549 392 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms