RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 PROKR1Q8TCW9 393 aa21.79■■□□□ 1.08
CCDC9-201ENST00000221922 FBXL20Q96IG2 436 aa21.79■■□□□ 1.08
CCDC9-201ENST00000221922 TMEM74Q96NL1 305 aa21.79■■□□□ 1.08
CCDC9-201ENST00000221922 CORO1BQ9BR76 489 aa21.79■■□□□ 1.08
CCDC9-201ENST00000221922 NPLQ9BXD5 320 aaPredicted RBP21.79■■□□□ 1.08
CCDC9-201ENST00000221922 RPF2Q9H7B2 306 aaKnown RBP21.79■■□□□ 1.08
CCDC9-201ENST00000221922 IL26Q9NPH9 171 aa21.79■■□□□ 1.08
CCDC9-201ENST00000221922 GALNT8Q9NY28 637 aa21.79■■□□□ 1.08
CCDC9-201ENST00000221922 OARD1Q9Y530 152 aa21.79■■□□□ 1.08
CCDC9-201ENST00000221922 IRAK3Q9Y616 596 aa21.79■■□□□ 1.08
CCDC9-201ENST00000221922 GLYATL1P3A0A0U1RQE8 302 aa21.79■■□□□ 1.08
CCDC9-201ENST00000221922 SYNCRIPO60506 623 aaKnown RBP21.79■■□□□ 1.08
CCDC9-201ENST00000221922 ZNF821O75541 412 aaPredicted RBP21.79■■□□□ 1.08
CCDC9-201ENST00000221922 OTCP00480 354 aa21.79■■□□□ 1.08
CCDC9-201ENST00000221922 LDLRP01130 860 aa21.79■■□□□ 1.08
CCDC9-201ENST00000221922 HRH2P25021 359 aa21.79■■□□□ 1.08
CCDC9-201ENST00000221922 HNF1BP35680 557 aa21.79■■□□□ 1.08
CCDC9-201ENST00000221922 SPAM1P38567 509 aa21.79■■□□□ 1.08
CCDC9-201ENST00000221922 ARL1P40616 181 aaPredicted RBP21.79■■□□□ 1.08
CCDC9-201ENST00000221922 PTPN5P54829 565 aa21.79■■□□□ 1.08
CCDC9-201ENST00000221922 GTF2H2Q13888 395 aa21.79■■□□□ 1.08
CCDC9-201ENST00000221922 CDKN3Q16667 212 aa21.79■■□□□ 1.08
CCDC9-201ENST00000221922 GTF2H2CQ6P1K8 395 aa21.79■■□□□ 1.08
CCDC9-201ENST00000221922 LETMD1Q6P1Q0 360 aa21.79■■□□□ 1.08
CCDC9-201ENST00000221922 SCIMPQ6UWF3 145 aa21.79■■□□□ 1.08
CCDC9-201ENST00000221922 PRR23BQ6ZRT6 265 aa21.79■■□□□ 1.08
CCDC9-201ENST00000221922 ZFAND4Q86XD8 727 aa21.79■■□□□ 1.08
CCDC9-201ENST00000221922 CLVS1Q8IUQ0 354 aaPredicted RBP21.79■■□□□ 1.08
CCDC9-201ENST00000221922 HID1Q8IV36 788 aa21.79■■□□□ 1.08
CCDC9-201ENST00000221922 FNDC5Q8NAU1 212 aa21.79■■□□□ 1.08
CCDC9-201ENST00000221922 BIRC7Q96CA5 298 aa21.79■■□□□ 1.08
CCDC9-201ENST00000221922 LMLNQ96KR4 655 aa21.79■■□□□ 1.08
CCDC9-201ENST00000221922 C1orf50Q9BV19 199 aa21.79■■□□□ 1.08
CCDC9-201ENST00000221922 EMILIN2Q9BXX0 1053 aa21.79■■□□□ 1.08
CCDC9-201ENST00000221922 INTS7Q9NVH2 962 aaKnown RBP21.79■■□□□ 1.08
CCDC9-201ENST00000221922 CRLS1Q9UJA2 301 aa21.79■■□□□ 1.08
CCDC9-201ENST00000221922 INTS6Q9UL03 887 aaKnown RBP21.79■■□□□ 1.08
CCDC9-201ENST00000221922 CDH7Q9ULB5 785 aa21.79■■□□□ 1.08
CCDC9-201ENST00000221922 ST14Q9Y5Y6 855 aa21.79■■□□□ 1.08
CCDC9-201ENST00000221922 CLDN7O95471 211 aa21.78■■□□□ 1.08
CCDC9-201ENST00000221922 VARSP26640 1264 aaKnown RBP21.78■■□□□ 1.08
CCDC9-201ENST00000221922 CTBSQ01459 385 aa21.78■■□□□ 1.08
CCDC9-201ENST00000221922 CRY1Q16526 586 aa21.78■■□□□ 1.08
CCDC9-201ENST00000221922 TIGD2Q4W5G0 525 aa21.78■■□□□ 1.08
CCDC9-201ENST00000221922 FBXO46Q6PJ61 603 aaPredicted RBP21.78■■□□□ 1.08
CCDC9-201ENST00000221922 BPIFB1Q8TDL5 484 aa21.78■■□□□ 1.08
CCDC9-201ENST00000221922 OSCP1Q8WVF1 389 aa21.78■■□□□ 1.08
CCDC9-201ENST00000221922 RPL10LQ96L21 214 aaKnown RBP21.78■■□□□ 1.08
CCDC9-201ENST00000221922 HTATIP2Q9BUP3 242 aa21.78■■□□□ 1.08
CCDC9-201ENST00000221922 YTHDF1Q9BYJ9 559 aaKnown RBP21.78■■□□□ 1.08
CCDC9-201ENST00000221922 EBF1Q9UH73 591 aa21.78■■□□□ 1.08
CCDC9-201ENST00000221922 GMEB1Q9Y692 573 aa21.78■■□□□ 1.08
CCDC9-201ENST00000221922 PIKFYVEQ9Y2I7 2098 aa21.78■■□□□ 1.08
CCDC9-201ENST00000221922 A0A0J9YVX5 310 aa21.78■■□□□ 1.08
CCDC9-201ENST00000221922 ZBBXA8MT70 800 aa21.78■■□□□ 1.08
CCDC9-201ENST00000221922 SLC25A14O95258 325 aaPredicted RBP21.78■■□□□ 1.08
CCDC9-201ENST00000221922 CAPN1P07384 714 aa21.78■■□□□ 1.08
CCDC9-201ENST00000221922 BPIP17213 487 aa21.78■■□□□ 1.08
CCDC9-201ENST00000221922 TTKP33981 857 aa21.78■■□□□ 1.08
CCDC9-201ENST00000221922 PRKG2Q13237 762 aa21.78■■□□□ 1.08
CCDC9-201ENST00000221922 MACC1Q6ZN28 852 aa21.78■■□□□ 1.08
CCDC9-201ENST00000221922 Q6ZSR9 355 aa21.78■■□□□ 1.08
CCDC9-201ENST00000221922 HOMEZQ8IX15 550 aa21.78■■□□□ 1.08
CCDC9-201ENST00000221922 OR2AP1Q8NGE2 309 aa21.78■■□□□ 1.08
CCDC9-201ENST00000221922 LYSMD1Q96S90 227 aa21.78■■□□□ 1.08
CCDC9-201ENST00000221922 BOCQ9BWV1 1114 aa21.78■■□□□ 1.08
CCDC9-201ENST00000221922 HEBP1Q9NRV9 189 aa21.78■■□□□ 1.08
CCDC9-201ENST00000221922 WBP1LQ9NX94 342 aa21.78■■□□□ 1.08
CCDC9-201ENST00000221922 SEC24DO94855 1032 aaPredicted RBP21.77■■□□□ 1.08
CCDC9-201ENST00000221922 CLIC3O95833 236 aa21.77■■□□□ 1.08
CCDC9-201ENST00000221922 SNRPD1P62314 119 aaKnown RBP21.77■■□□□ 1.08
CCDC9-201ENST00000221922 ADARB1P78563 741 aaKnown RBP21.77■■□□□ 1.08
CCDC9-201ENST00000221922 IL27RAQ6UWB1 636 aa21.77■■□□□ 1.08
CCDC9-201ENST00000221922 NECAB2Q7Z6G3 386 aa21.77■■□□□ 1.08
CCDC9-201ENST00000221922 RIMKLAQ8IXN7 391 aa21.77■■□□□ 1.08
CCDC9-201ENST00000221922 ZBTB2Q8N680 514 aa21.77■■□□□ 1.08
CCDC9-201ENST00000221922 C12orf43Q96C57 262 aaKnown RBP21.77■■□□□ 1.08
CCDC9-201ENST00000221922 CDK15Q96Q40 435 aa21.77■■□□□ 1.08
CCDC9-201ENST00000221922 DOK1Q99704 481 aa21.77■■□□□ 1.08
CCDC9-201ENST00000221922 TCF25Q9BQ70 676 aa21.77■■□□□ 1.08
CCDC9-201ENST00000221922 USP22Q9UPT9 525 aa21.77■■□□□ 1.08
CCDC9-201ENST00000221922 INSL6Q9Y581 213 aa21.77■■□□□ 1.08
CCDC9-201ENST00000221922 PCDHB3Q9Y5E6 796 aa21.77■■□□□ 1.08
CCDC9-201ENST00000221922 HEMK1Q9Y5R4 338 aaPredicted RBP21.77■■□□□ 1.08
CCDC9-201ENST00000221922 MTCL1Q9Y4B5 1905 aaKnown RBP21.77■■□□□ 1.07
CCDC9-201ENST00000221922 OR7A17O14581 309 aa21.76■■□□□ 1.07
CCDC9-201ENST00000221922 CCL16O15467 120 aa21.76■■□□□ 1.07
CCDC9-201ENST00000221922 TRIM16O95361 564 aa21.76■■□□□ 1.07
CCDC9-201ENST00000221922 TTLL9Q3SXZ7 439 aa21.76■■□□□ 1.07
CCDC9-201ENST00000221922 DGKKQ5KSL6 1271 aa21.76■■□□□ 1.07
CCDC9-201ENST00000221922 METTL2BQ6P1Q9 378 aaKnown RBP21.76■■□□□ 1.07
CCDC9-201ENST00000221922 DLEU7Q6UYE1 221 aa21.76■■□□□ 1.07
CCDC9-201ENST00000221922 LEMD2Q8NC56 503 aa21.76■■□□□ 1.07
CCDC9-201ENST00000221922 OR4F6Q8NGB9 312 aa21.76■■□□□ 1.07
CCDC9-201ENST00000221922 ZNF420Q8TAQ5 688 aaPredicted RBP21.76■■□□□ 1.07
CCDC9-201ENST00000221922 SLC22A17Q8WUG5 538 aa21.76■■□□□ 1.07
CCDC9-201ENST00000221922 CHID1Q9BWS9 393 aa21.76■■□□□ 1.07
CCDC9-201ENST00000221922 TNKS2Q9H2K2 1166 aa21.76■■□□□ 1.07
CCDC9-201ENST00000221922 PCDH10Q9P2E7 1040 aa21.76■■□□□ 1.07
CCDC9-201ENST00000221922 ARNTLO00327 626 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms