RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 NR1D2Q14995 579 aa23.07■■□□□ 1.28
HOMER3-201ENST00000221222 TTLL9Q3SXZ7 439 aa23.07■■□□□ 1.28
HOMER3-201ENST00000221222 SIDT2Q8NBJ9 832 aaKnown RBP23.07■■□□□ 1.28
HOMER3-201ENST00000221222 INPP5DQ92835 1189 aa23.07■■□□□ 1.28
HOMER3-201ENST00000221222 CXorf40BQ96DE9 158 aa23.07■■□□□ 1.28
HOMER3-201ENST00000221222 SCNM1Q9BWG6 230 aa23.07■■□□□ 1.28
HOMER3-201ENST00000221222 STN1Q9H668 368 aaKnown RBP23.07■■□□□ 1.28
HOMER3-201ENST00000221222 LRIT1Q9P2V4 623 aa23.07■■□□□ 1.28
HOMER3-201ENST00000221222 WASF3Q9UPY6 502 aa23.07■■□□□ 1.28
HOMER3-201ENST00000221222 PCDHGA1Q9Y5H4 931 aa23.07■■□□□ 1.28
HOMER3-201ENST00000221222 HEBP2Q9Y5Z4 205 aa23.07■■□□□ 1.28
HOMER3-201ENST00000221222 RP1P56715 2156 aa23.07■■□□□ 1.28
HOMER3-201ENST00000221222 PPM1DO15297 605 aa23.06■■□□□ 1.28
HOMER3-201ENST00000221222 SLC29A2Q14542 456 aa23.06■■□□□ 1.28
HOMER3-201ENST00000221222 UNQ6494/PRO21346Q6UXR6 183 aa23.06■■□□□ 1.28
HOMER3-201ENST00000221222 EFL1Q7Z2Z2 1120 aaKnown RBP23.06■■□□□ 1.28
HOMER3-201ENST00000221222 RBM12BQ8IXT5 1001 aaKnown RBP23.06■■□□□ 1.28
HOMER3-201ENST00000221222 ACVR1CQ8NER5 493 aa23.06■■□□□ 1.28
HOMER3-201ENST00000221222 UHMK1Q8TAS1 419 aaKnown RBP23.06■■□□□ 1.28
HOMER3-201ENST00000221222 IFI44Q8TCB0 444 aa23.06■■□□□ 1.28
HOMER3-201ENST00000221222 SLC44A1Q8WWI5 657 aa23.06■■□□□ 1.28
HOMER3-201ENST00000221222 TFGQ92734 400 aaPredicted RBP23.06■■□□□ 1.28
HOMER3-201ENST00000221222 CAVIN3Q969G5 261 aa23.06■■□□□ 1.28
HOMER3-201ENST00000221222 SH3KBP1Q96B97 665 aa23.06■■□□□ 1.28
HOMER3-201ENST00000221222 ELMO2Q96JJ3 720 aa23.06■■□□□ 1.28
HOMER3-201ENST00000221222 GPR22Q99680 433 aa23.06■■□□□ 1.28
HOMER3-201ENST00000221222 OLFM1Q99784 485 aa23.06■■□□□ 1.28
HOMER3-201ENST00000221222 UCK1Q9HA47 277 aa23.06■■□□□ 1.28
HOMER3-201ENST00000221222 SLC40A1Q9NP59 571 aa23.06■■□□□ 1.28
HOMER3-201ENST00000221222 IMP3Q9NV31 184 aaKnown RBP23.06■■□□□ 1.28
HOMER3-201ENST00000221222 TRMT6Q9UJA5 497 aaKnown RBP23.06■■□□□ 1.28
HOMER3-201ENST00000221222 RHPN2P1A8MT19 583 aa23.05■■□□□ 1.28
HOMER3-201ENST00000221222 HYAL3O43820 417 aaPredicted RBP23.05■■□□□ 1.28
HOMER3-201ENST00000221222 FAM155BO75949 473 aa23.05■■□□□ 1.28
HOMER3-201ENST00000221222 DKK1O94907 266 aa23.05■■□□□ 1.28
HOMER3-201ENST00000221222 VIPP01282 170 aa23.05■■□□□ 1.28
HOMER3-201ENST00000221222 ACSBG2Q5FVE4 666 aa23.05■■□□□ 1.28
HOMER3-201ENST00000221222 PERM1Q5SV97 790 aa23.05■■□□□ 1.28
HOMER3-201ENST00000221222 TRIM48Q8IWZ4 208 aa23.05■■□□□ 1.28
HOMER3-201ENST00000221222 ZFPM2Q8WW38 1151 aa23.05■■□□□ 1.28
HOMER3-201ENST00000221222 CCDC74AQ96AQ1 378 aa23.05■■□□□ 1.28
HOMER3-201ENST00000221222 MTO1Q9Y2Z2 717 aaKnown RBP23.05■■□□□ 1.28
HOMER3-201ENST00000221222 CFAP20Q9Y6A4 193 aaKnown RBP23.05■■□□□ 1.28
HOMER3-201ENST00000221222 AKAP13Q12802 2813 aa23.05■■□□□ 1.28
HOMER3-201ENST00000221222 EIF3FO00303 357 aaPredicted RBP23.04■■□□□ 1.28
HOMER3-201ENST00000221222 PROS1P07225 676 aa23.04■■□□□ 1.28
HOMER3-201ENST00000221222 CBSLP0DN79 551 aa23.04■■□□□ 1.28
HOMER3-201ENST00000221222 NDUFS1P28331 727 aa23.04■■□□□ 1.28
HOMER3-201ENST00000221222 CBSP35520 551 aa23.04■■□□□ 1.28
HOMER3-201ENST00000221222 GPR3P46089 330 aa23.04■■□□□ 1.28
HOMER3-201ENST00000221222 POU4F1Q01851 419 aa23.04■■□□□ 1.28
HOMER3-201ENST00000221222 BIRC2Q13490 618 aa23.04■■□□□ 1.28
HOMER3-201ENST00000221222 UAP1Q16222 522 aaPredicted RBP23.04■■□□□ 1.28
HOMER3-201ENST00000221222 NEK10Q6ZWH5 1172 aa23.04■■□□□ 1.28
HOMER3-201ENST00000221222 PIM3Q86V86 326 aa23.04■■□□□ 1.28
HOMER3-201ENST00000221222 PAFAH2Q99487 392 aa23.04■■□□□ 1.28
HOMER3-201ENST00000221222 COLEC10Q9Y6Z7 277 aa23.04■■□□□ 1.28
HOMER3-201ENST00000221222 EXOC1LA0A1B0GW35 172 aa23.03■■□□□ 1.28
HOMER3-201ENST00000221222 RFPL3O75679 317 aa23.03■■□□□ 1.28
HOMER3-201ENST00000221222 ITGA2BP08514 1039 aa23.03■■□□□ 1.28
HOMER3-201ENST00000221222 ENO3P13929 434 aaPredicted RBP23.03■■□□□ 1.28
HOMER3-201ENST00000221222 TAS2R39P59534 338 aa23.03■■□□□ 1.28
HOMER3-201ENST00000221222 DUS1LQ6P1R4 473 aaKnown RBP23.03■■□□□ 1.28
HOMER3-201ENST00000221222 UNC5DQ6UXZ4 953 aa23.03■■□□□ 1.28
HOMER3-201ENST00000221222 TMEM26Q6ZUK4 368 aa23.03■■□□□ 1.28
HOMER3-201ENST00000221222 UBLCP1Q8WVY7 318 aaPredicted RBP23.03■■□□□ 1.28
HOMER3-201ENST00000221222 LDHAL6BQ9BYZ2 381 aaPredicted RBP23.03■■□□□ 1.28
HOMER3-201ENST00000221222 MVB12BQ9H7P6 319 aa23.03■■□□□ 1.28
HOMER3-201ENST00000221222 POPDC3Q9HBV1 291 aa23.03■■□□□ 1.28
HOMER3-201ENST00000221222 FETUBQ9UGM5 382 aa23.03■■□□□ 1.28
HOMER3-201ENST00000221222 PRAMEF33A0A0G2JMD5 474 aa23.02■■□□□ 1.28
HOMER3-201ENST00000221222 LILRA5A6NI73 299 aa23.02■■□□□ 1.28
HOMER3-201ENST00000221222 INHBAP08476 426 aa23.02■■□□□ 1.28
HOMER3-201ENST00000221222 FTH1P19P0C7X4 201 aa23.02■■□□□ 1.28
HOMER3-201ENST00000221222 CDK4P11802 303 aa23.02■■□□□ 1.28
HOMER3-201ENST00000221222 PDAP1Q13442 181 aaKnown RBP23.02■■□□□ 1.28
HOMER3-201ENST00000221222 LRRC8EQ6NSJ5 796 aa23.02■■□□□ 1.28
HOMER3-201ENST00000221222 PAQR3Q6TCH7 311 aa23.02■■□□□ 1.28
HOMER3-201ENST00000221222 SPRED1Q7Z699 444 aa23.02■■□□□ 1.28
HOMER3-201ENST00000221222 SLCO6A1Q86UG4 719 aa23.02■■□□□ 1.28
HOMER3-201ENST00000221222 CPNE9Q8IYJ1 553 aa23.02■■□□□ 1.28
HOMER3-201ENST00000221222 MRRFQ96E11 262 aaKnown RBP23.02■■□□□ 1.28
HOMER3-201ENST00000221222 TSPAN17Q96FV3 270 aa23.02■■□□□ 1.28
HOMER3-201ENST00000221222 CCDC3Q9BQI4 270 aa23.02■■□□□ 1.28
HOMER3-201ENST00000221222 DHRS4Q9BTZ2 278 aa23.02■■□□□ 1.28
HOMER3-201ENST00000221222 KIR3DX1Q9H7L2 352 aa23.02■■□□□ 1.28
HOMER3-201ENST00000221222 ZNF180Q9UJW8 692 aa23.02■■□□□ 1.28
HOMER3-201ENST00000221222 SLC39A10Q9ULF5 831 aa23.02■■□□□ 1.28
HOMER3-201ENST00000221222 APOBEC2Q9Y235 224 aaKnown RBP23.02■■□□□ 1.28
HOMER3-201ENST00000221222 ASF1AQ9Y294 204 aa23.02■■□□□ 1.28
HOMER3-201ENST00000221222 MATN4O95460 622 aa23.01■■□□□ 1.27
HOMER3-201ENST00000221222 MPC1LP0DKB6 136 aa23.01■■□□□ 1.27
HOMER3-201ENST00000221222 HSD17B3P37058 310 aa23.01■■□□□ 1.27
HOMER3-201ENST00000221222 EPHA4P54764 986 aa23.01■■□□□ 1.27
HOMER3-201ENST00000221222 GPR18Q14330 331 aa23.01■■□□□ 1.27
HOMER3-201ENST00000221222 MAP9Q49MG5 647 aa23.01■■□□□ 1.27
HOMER3-201ENST00000221222 SPNS2Q8IVW8 549 aa23.01■■□□□ 1.27
HOMER3-201ENST00000221222 CEP97Q8IW35 865 aa23.01■■□□□ 1.27
HOMER3-201ENST00000221222 MREGQ8N565 214 aa23.01■■□□□ 1.27
HOMER3-201ENST00000221222 OR5K2Q8NHB8 316 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms