RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 RAB7BQ96AH8 199 aa13.52□□□□□ -0.24
SIX4-201ENST00000216513 MARCH7Q9H992 704 aa13.52□□□□□ -0.24
SIX4-201ENST00000216513 DTLQ9NZJ0 730 aa13.52□□□□□ -0.24
SIX4-201ENST00000216513 CXXC1Q9P0U4 656 aaPredicted RBP13.52□□□□□ -0.24
SIX4-201ENST00000216513 LRRC10BA6NIK2 292 aa13.52□□□□□ -0.25
SIX4-201ENST00000216513 CHRNB2P17787 502 aa13.52□□□□□ -0.25
SIX4-201ENST00000216513 PTPN4P29074 926 aa13.52□□□□□ -0.25
SIX4-201ENST00000216513 FAM78AQ5JUQ0 283 aa13.52□□□□□ -0.25
SIX4-201ENST00000216513 C1orf189Q5VU69 101 aa13.52□□□□□ -0.25
SIX4-201ENST00000216513 TMEM110Q86TL2 294 aa13.52□□□□□ -0.25
SIX4-201ENST00000216513 DEPDC7Q96QD5 511 aa13.52□□□□□ -0.25
SIX4-201ENST00000216513 BTBD10Q9BSF8 475 aa13.52□□□□□ -0.25
SIX4-201ENST00000216513 RBCK1Q9BYM8 510 aa13.52□□□□□ -0.25
SIX4-201ENST00000216513 WDR55Q9H6Y2 383 aaPredicted RBP13.52□□□□□ -0.25
SIX4-201ENST00000216513 AJAP1Q9UKB5 411 aaPredicted RBP13.52□□□□□ -0.25
SIX4-201ENST00000216513 ANXA8L1Q5VT79 327 aa13.52□□□□□ -0.25
SIX4-201ENST00000216513 DHFR2Q86XF0 187 aa13.52□□□□□ -0.25
SIX4-201ENST00000216513 EID2Q8N6I1 236 aa13.52□□□□□ -0.25
SIX4-201ENST00000216513 C7orf57Q8NEG2 295 aa13.52□□□□□ -0.25
SIX4-201ENST00000216513 TEKT5Q96M29 485 aa13.52□□□□□ -0.25
SIX4-201ENST00000216513 PADI2Q9Y2J8 665 aa13.52□□□□□ -0.25
SIX4-201ENST00000216513 LOC100506127A0A0U1RQW1 187 aa13.52□□□□□ -0.25
SIX4-201ENST00000216513 CCDC162PA2VCL2 907 aa13.52□□□□□ -0.25
SIX4-201ENST00000216513 CDC40O60508 579 aaKnown RBP eCLIP13.52□□□□□ -0.25
SIX4-201ENST00000216513 CYP11A1P05108 521 aa13.52□□□□□ -0.25
SIX4-201ENST00000216513 ANXA4P09525 319 aaPredicted RBP13.52□□□□□ -0.25
SIX4-201ENST00000216513 FAM43BQ6ZT52 329 aaPredicted RBP13.52□□□□□ -0.25
SIX4-201ENST00000216513 EPHX4Q8IUS5 362 aa13.52□□□□□ -0.25
SIX4-201ENST00000216513 APCDD1Q8J025 514 aa13.52□□□□□ -0.25
SIX4-201ENST00000216513 KCNH6Q9H252 994 aa13.52□□□□□ -0.25
SIX4-201ENST00000216513 RHOJQ9H4E5 214 aa13.52□□□□□ -0.25
SIX4-201ENST00000216513 XKR8Q9H6D3 395 aa13.52□□□□□ -0.25
SIX4-201ENST00000216513 IFT80Q9P2H3 777 aaPredicted RBP13.52□□□□□ -0.25
SIX4-201ENST00000216513 CAPN14A8MX76 684 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 FAM98BQ52LJ0 330 aaKnown RBP13.51□□□□□ -0.25
SIX4-201ENST00000216513 TAS1R3Q7RTX0 852 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 ACTRT2Q8TDY3 377 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 PYCR2Q96C36 320 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 C5P01031 1676 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 RFXANKO14593 260 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 AZIN1O14977 448 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 OAZ2O95190 189 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 SLC7A1P30825 629 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 CD70P32970 193 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 PSMD4P55036 377 aaKnown RBP13.51□□□□□ -0.25
SIX4-201ENST00000216513 ZDHHC1Q8WTX9 485 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 PTCD2Q8WV60 388 aaKnown RBP13.51□□□□□ -0.25
SIX4-201ENST00000216513 TIPRLO75663 272 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 KRT36O76013 467 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 ESR1P03372 595 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 ETS2P15036 469 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 TAS2R41P59536 307 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 GTF2H2Q13888 395 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 PRAMEF13Q5VWM6 474 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 TANGO2Q6ICL3 276 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 GTF2H2CQ6P1K8 395 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 OR52E6Q96RD3 313 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 MTG2Q9H4K7 406 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 FANCFQ9NPI8 374 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 DNMT3BQ9UBC3 853 aaKnown RBP13.51□□□□□ -0.25
SIX4-201ENST00000216513 KIAA0355O15063 1070 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 NPC1O15118 1278 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 CLEC3AO75596 197 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 GIMD1P0DJR0 217 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 HSD17B2P37059 387 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 VSX2P58304 361 aaPredicted RBP13.51□□□□□ -0.25
SIX4-201ENST00000216513 OLIG2Q13516 323 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 NR0B2Q15466 257 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 NCEH1Q6PIU2 408 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 MMABQ96EY8 250 aaPredicted RBP13.51□□□□□ -0.25
SIX4-201ENST00000216513 LENG8Q96PV6 779 aaPredicted RBP13.51□□□□□ -0.25
SIX4-201ENST00000216513 SLC17A9Q9BYT1 436 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 RABIFP47224 123 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 CACNA2D1P54289 1103 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 FRG1Q14331 258 aaKnown RBP13.51□□□□□ -0.25
SIX4-201ENST00000216513 KLHL24Q6TFL4 600 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 OR10H5Q8NGA6 315 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 VANGL1Q8TAA9 524 aaPredicted RBP13.51□□□□□ -0.25
SIX4-201ENST00000216513 KAT6AQ92794 2004 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 ZHX1-C8orf76Q96EF9 292 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 HDHD2Q9H0R4 259 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 CLEC4AQ9UMR7 237 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 TIMM22Q9Y584 194 aa13.51□□□□□ -0.25
SIX4-201ENST00000216513 MBLAC1A4D2B0 266 aaPredicted RBP13.5□□□□□ -0.25
SIX4-201ENST00000216513 RRP8O43159 456 aaKnown RBP13.5□□□□□ -0.25
SIX4-201ENST00000216513 PAX7P23759 505 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 ARHGAP36Q6ZRI8 547 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 GALNT7Q86SF2 657 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 PHF7Q9BWX1 381 aaPredicted RBP13.5□□□□□ -0.25
SIX4-201ENST00000216513 SLC2A11Q9BYW1 496 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 REXO4Q9GZR2 422 aaKnown RBP13.5□□□□□ -0.25
SIX4-201ENST00000216513 METTL7AQ9H8H3 244 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 RARRES3Q9UL19 164 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 ANKRD66B4E2M5 251 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 MAGP20916 626 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 IRS1P35568 1242 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 PDK4Q16654 411 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 SPPL3Q8TCT6 385 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 TMEM248Q9NWD8 314 aa13.5□□□□□ -0.25
SIX4-201ENST00000216513 LCHNA4D1U4 455 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms