RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 ALKAL1Q6UXT8 129 aa16.47■□□□□ 0.23
CTDP1-201ENST00000075430 VTCN1Q7Z7D3 282 aa16.47■□□□□ 0.23
CTDP1-201ENST00000075430 C10orf111Q8N326 155 aa16.47■□□□□ 0.23
CTDP1-201ENST00000075430 TTC9BQ8N6N2 239 aa16.47■□□□□ 0.23
CTDP1-201ENST00000075430 SCAIQ8N9R8 606 aa16.47■□□□□ 0.23
CTDP1-201ENST00000075430 OR4F6Q8NGB9 312 aa16.47■□□□□ 0.23
CTDP1-201ENST00000075430 NETO1Q8TDF5 533 aa16.47■□□□□ 0.23
CTDP1-201ENST00000075430 FUBP1Q96AE4 644 aaKnown RBP16.47■□□□□ 0.23
CTDP1-201ENST00000075430 L3HYPDHQ96EM0 354 aa16.47■□□□□ 0.23
CTDP1-201ENST00000075430 ZBED2Q9BTP6 218 aa16.47■□□□□ 0.23
CTDP1-201ENST00000075430 SCHIP1Q9P0W5 487 aaPredicted RBP16.47■□□□□ 0.23
CTDP1-201ENST00000075430 MAGEL2Q9UJ55 1249 aa16.47■□□□□ 0.23
CTDP1-201ENST00000075430 C3orf18Q9UK00 162 aa16.47■□□□□ 0.23
CTDP1-201ENST00000075430 DERAQ9Y315 318 aa16.47■□□□□ 0.23
CTDP1-201ENST00000075430 DNMT3AQ9Y6K1 912 aaPredicted RBP16.47■□□□□ 0.23
CTDP1-201ENST00000075430 ZNF701M0R085 212 aaPredicted RBP16.46■□□□□ 0.23
CTDP1-201ENST00000075430 ST13P50502 369 aaKnown RBP16.46■□□□□ 0.23
CTDP1-201ENST00000075430 TBX4P57082 545 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 ERVK-8P63133 956 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 SELENBP1Q13228 472 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 INTS6LQ5JSJ4 861 aaKnown RBP16.46■□□□□ 0.23
CTDP1-201ENST00000075430 OR8H2Q8N162 312 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 PROX1Q92786 737 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 CHCHD6Q9BRQ6 235 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 TPK1Q9H3S4 243 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 IPPKQ9H8X2 491 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 SLC6A13Q9NSD5 602 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 TMEM9Q9P0T7 183 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 PCDHB14Q9Y5E9 798 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 A0A096LPI6 279 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 ARL5CA6NH57 179 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 UPK1AO00322 258 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 F2P00734 622 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 GSTM2P28161 218 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 C21orf33P30042 268 aaPredicted RBP16.46■□□□□ 0.23
CTDP1-201ENST00000075430 SERPINB10P48595 397 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 CRYBB1P53674 252 aaPredicted RBP16.46■□□□□ 0.23
CTDP1-201ENST00000075430 GTF2IRD2BQ6EKJ0 949 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 GTF2IRD2Q86UP8 949 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 LIX1Q8N485 282 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 RNF175Q8N4F7 328 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 UTP15Q8TED0 518 aaKnown RBP16.46■□□□□ 0.23
CTDP1-201ENST00000075430 FAR1Q8WVX9 515 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 MBOAT4Q96T53 435 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 UGT2B28Q9BY64 529 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 ELOVL7A1L3X0 281 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 TAF4O00268 1085 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 PAPSS2O95340 614 aaPredicted RBP16.46■□□□□ 0.23
CTDP1-201ENST00000075430 CSRP3P50461 194 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 ARHGEF7Q14155 803 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 ATAD3BQ5T9A4 648 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 ARMC12Q5T9G4 340 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 C16orf59Q7L2K0 433 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 NSMCE3Q96MG7 304 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 ZNF583Q96ND8 569 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 KCNS3Q9BQ31 491 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 MFSD1Q9H3U5 465 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 SYTL2Q9HCH5 934 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 TRIM39Q9HCM9 518 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 SCN3BQ9NY72 215 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 IL37Q9NZH6 218 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 PDP1Q9P0J1 537 aaPredicted RBP16.46■□□□□ 0.23
CTDP1-201ENST00000075430 GMIPQ9P107 970 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 PCDHGA3Q9Y5H0 932 aa16.46■□□□□ 0.23
CTDP1-201ENST00000075430 ASNA1O43681 348 aa16.45■□□□□ 0.22
CTDP1-201ENST00000075430 SSX4O60224 188 aa16.45■□□□□ 0.22
CTDP1-201ENST00000075430 SPNP16150 400 aa16.45■□□□□ 0.22
CTDP1-201ENST00000075430 AKT1P31749 480 aa16.45■□□□□ 0.22
CTDP1-201ENST00000075430 OR1G1P47890 313 aa16.45■□□□□ 0.22
CTDP1-201ENST00000075430 HK3P52790 923 aa16.45■□□□□ 0.22
CTDP1-201ENST00000075430 CDC42EP1Q00587 391 aa16.45■□□□□ 0.22
CTDP1-201ENST00000075430 SF1Q15637 639 aaKnown RBP16.45■□□□□ 0.22
CTDP1-201ENST00000075430 CTF1Q16619 201 aa16.45■□□□□ 0.22
CTDP1-201ENST00000075430 ZNF648Q5T619 568 aaPredicted RBP16.45■□□□□ 0.22
CTDP1-201ENST00000075430 AKAP14Q86UN6 197 aa16.45■□□□□ 0.22
CTDP1-201ENST00000075430 CYP4Z1Q86W10 505 aa16.45■□□□□ 0.22
CTDP1-201ENST00000075430 MYEOVQ96EZ4 313 aa16.45■□□□□ 0.22
CTDP1-201ENST00000075430 IMP4Q96G21 291 aaKnown RBP16.45■□□□□ 0.22
CTDP1-201ENST00000075430 DOK1Q99704 481 aa16.45■□□□□ 0.22
CTDP1-201ENST00000075430 ADAM2Q99965 735 aa16.45■□□□□ 0.22
CTDP1-201ENST00000075430 DPH2Q9BQC3 489 aaPredicted RBP16.45■□□□□ 0.22
CTDP1-201ENST00000075430 AARSD1Q9BTE6 412 aaKnown RBP16.45■□□□□ 0.22
CTDP1-201ENST00000075430 ENPP5Q9UJA9 477 aa16.45■□□□□ 0.22
CTDP1-201ENST00000075430 PNMA8CA0A1B0GUJ8 204 aa16.45■□□□□ 0.22
CTDP1-201ENST00000075430 SOBPA7XYQ1 873 aa16.45■□□□□ 0.22
CTDP1-201ENST00000075430 IRF1P10914 325 aa16.45■□□□□ 0.22
CTDP1-201ENST00000075430 MC4RP32245 332 aa16.45■□□□□ 0.22
CTDP1-201ENST00000075430 DCTP40126 519 aa16.45■□□□□ 0.22
CTDP1-201ENST00000075430 EEFSECP57772 596 aaKnown RBP16.45■□□□□ 0.22
CTDP1-201ENST00000075430 EMX2Q04743 252 aa16.45■□□□□ 0.22
CTDP1-201ENST00000075430 CDK5R2Q13319 367 aa16.45■□□□□ 0.22
CTDP1-201ENST00000075430 TAB1Q15750 504 aa16.45■□□□□ 0.22
CTDP1-201ENST00000075430 FBXL22Q6P050 247 aa16.45■□□□□ 0.22
CTDP1-201ENST00000075430 PROSER1Q86XN7 944 aa16.45■□□□□ 0.22
CTDP1-201ENST00000075430 P3H2Q8IVL5 708 aa16.45■□□□□ 0.22
CTDP1-201ENST00000075430 LGALS12Q96DT0 336 aa16.45■□□□□ 0.22
CTDP1-201ENST00000075430 MS4A4AQ96JQ5 239 aa16.45■□□□□ 0.22
CTDP1-201ENST00000075430 MAF1Q9H063 256 aa16.45■□□□□ 0.22
CTDP1-201ENST00000075430 TP63Q9H3D4 680 aaPredicted RBP16.45■□□□□ 0.22
CTDP1-201ENST00000075430 MRGBPQ9NV56 204 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms