RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Tmem245B1AZA5 876 aa25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Gm6685D3YYP3 228 aa25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Aif1O70200 147 aa25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Adra1bP97717 514 aa25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Sox4Q06831 440 aa25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Ccdc138Q0VF22 680 aa25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Lingo4Q149C3 593 aa25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Q3KNL4 93 aa25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Mrpl10Q3TBW2 262 aaKnown RBP25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Ampd1Q3V1D3 745 aa25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Scn4bQ7M729 228 aa25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Ppp2r1bQ7TNP2 601 aaKnown RBP25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Rassf6Q80UQ2 353 aa25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Kirrel1Q80W68 789 aa25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Zbtb8bQ8CII0 484 aa25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Slc5a11Q8K0E3 673 aa25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Ssh3Q8K330 649 aa25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Zdhhc7Q91WU6 308 aa25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Prpf19Q99KP6 504 aaKnown RBP25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Gsdmdc1Q9D8T2 487 aa25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Herpud2Q9JJC9 404 aa25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 4921501E09RikA0A0R4J054 908 aa25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Cyp1a1P00184 524 aa25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 RapsnP12672 412 aa25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 G6pdxQ00612 515 aa25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Gm11492Q5ND19 536 aa25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Dna2Q6ZQJ5 1062 aa25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Trmt10aQ8C1Z8 328 aaKnown RBP25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Znf628Q8CJ78 1038 aa25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Stx5Q8K1E0 355 aa25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Fam161aQ8QZV6 448 aa25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Camkk1Q8VBY2 505 aa25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Actr3Q99JY9 418 aaKnown RBP25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 5530400C23RikQ9D3I0 173 aa25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Pus10Q9D3U0 527 aa25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Keap1Q9Z2X8 624 aaKnown RBP25.28■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Gm3147A0A0J9YU88 481 aa25.27■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Gm10424A0A0J9YVD0 481 aa25.27■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Vmn2r-ps130A0A140T8U3 855 aa25.27■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Nipsnap3aB1AWZ3 247 aa25.27■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Phf11bB4XVQ1 276 aa25.27■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Gm7971J3QMM8 481 aa25.27■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Kpna3O35344 521 aa25.27■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Eno2P17183 434 aa25.27■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Svs4P18419 113 aa25.27■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Epb42P49222 691 aa25.27■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Slc10a2P70172 348 aa25.27■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Scrn3Q3TMH2 418 aa25.27■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Ephx4Q6IE26 359 aa25.27■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Rspo2Q8BFU0 243 aa25.27■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Gpr26Q8BZA7 337 aa25.27■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Wdr26Q8C6G8 641 aa25.27■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Chchd4Q8VEA4 139 aa25.27■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Cyp4f15Q99N18 534 aa25.27■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Sohlh2Q9D489 467 aa25.27■■□□□ 1.64
Tpm1-216ENSMUST00000113707 PcntP48725 2898 aa25.27■■□□□ 1.64
Tpm1-216ENSMUST00000113707 Map7d3A2AEY4 876 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Gm2832F7AEC7 200 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Vmn2r57L7N269 863 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 RfngO09009 332 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Pde9aO70628 534 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Tnfrsf4P47741 272 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Crnkl1P63154 690 aaKnown RBP25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Znrf3Q5SSZ7 913 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 PtprnQ60673 979 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Ube2r2Q6ZWZ2 238 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Sdr16c5Q7TQA3 309 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Elmo1Q8BPU7 727 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Irak3Q8K4B2 609 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 SuoxQ8R086 546 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Acsf2Q8VCW8 615 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Cers2Q924Z4 380 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 LipfQ9CPP7 395 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Fndc8Q9D2H8 321 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Ddi1Q9DAF3 408 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 TesclQ9DAJ7 231 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 CrotQ9DC50 612 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Nme4Q9WV84 186 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Chil3O35744 398 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Mkln1O89050 735 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Uba1yP31254 1058 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 CcnfP51944 777 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Ntsr2P70310 416 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Micall2Q3TN34 1009 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Pacs2Q3V3Q7 862 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Ggt1Q60928 568 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Gata6Q61169 589 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Zzz3Q6KAQ7 910 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Fam149b1Q6NSV7 578 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Prpf38bQ80SY5 542 aaKnown RBP25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 AW551984Q8BGF0 804 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Hus1Q8BQY8 280 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Arhgap19Q8BRH3 494 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Kyat1Q8BTY1 424 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Rdh13Q8CEE7 334 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Dclre1cQ8K4J0 705 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Pcdhb8Q91XZ2 779 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Snrpb2Q9CQI7 225 aaKnown RBP25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Ccdc81Q9D5W4 654 aa25.26■■□□□ 1.63
Tpm1-216ENSMUST00000113707 Morf4l2Q9R0Q4 288 aa25.26■■□□□ 1.63
Retrieved 100 of 22,080 RNA–protein pairs in 22.6 ms