RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Gm9268E9Q0M3 861 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 PtprhE9Q0N2 971 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Vmn2r104E9Q2J5 860 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Dbil5O09035 87 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Ctnnd2O35927 1247 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Arhgap6O54834 987 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Lnx1O70263 728 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 DtnbO70585 659 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Bmp8aP34821 399 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Mmp9P41245 730 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Bmp8bP55105 399 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Stard6P59096 233 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Cdh8P97291 799 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Slc24a2Q14BI1 711 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Fahd2Q3TC72 313 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 LipnQ3U4B4 400 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Rnf44Q3UHJ8 407 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Jak2Q62120 1129 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Lrrc1Q80VQ1 524 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Fam69cQ8BQT2 410 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Rbm34Q8C5L7 375 aaKnown RBP8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 4931406P16RikQ8C5X1 1059 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Ints9Q8K114 658 aaKnown RBP8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Mrpl38Q8K2M0 380 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Pot1Q91WC1 640 aaKnown RBP8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Twf1Q91YR1 350 aaKnown RBP8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Mcoln1Q99J21 580 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Ethe1Q9DCM0 254 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gstk1Q9DCM2 226 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Bag3Q9JLV1 577 aaKnown RBP8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Trip4Q9QXN3 581 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Spint2Q9WU03 252 aa8.93□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Cntnap2Q9CPW0 1332 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Apol8A2VDH7 339 aaKnown RBP8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Btbd8D3YUB6 377 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm4788E9Q8B5 879 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Olfr1053L7MU59 313 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Rab33bO35963 229 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Bnip2O54940 326 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 CideaO70302 217 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Csf1rP09581 977 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Nid1P10493 1245 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Cdk7Q03147 346 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Pfdn4Q3UWL8 134 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 TefmQ5SSK3 364 aaKnown RBP8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Fzd7Q61090 572 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 March4Q80TE3 409 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Actr5Q80US4 605 aaKnown RBP8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Pgs1Q8BHF7 553 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Fbxw13Q8BI57 466 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Lkaaear1Q8BIG2 198 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 FsbpQ8BKE5 299 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 MaelQ8BVN9 434 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Tmem198bQ8CFU0 350 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 PhyhipQ8K0S0 330 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Eif3lQ8QZY1 564 aaKnown RBP8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Wipi1Q8R3E3 446 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Trap1Q9CQN1 706 aaKnown RBP8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 RgccQ9DBX1 137 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Rad1Q9QWZ1 280 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Psmd10Q9Z2X2 231 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Mtcl1Q3UHU5 1945 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Smurf2A2A5Z6 748 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Pramel3A2AHA7 463 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm7903A2AWL1 463 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Tmem45a2B7ZWJ5 289 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Prdm15E9Q8T2 1174 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 1700113H08RikE9Q9Q5 327 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm15023L7MUB4 467 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 ChrngP04760 519 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Krt4P07744 525 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Serpina3kP07759 418 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gnao1P18872 354 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 MitfQ08874 526 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 DselQ0VBN2 1207 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Tcfl5Q32NY8 489 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Tcerg1lQ3B807 590 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Cog7Q3UM29 770 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Tpd52Q62393 224 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gm21985Q6P6P5 1106 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Prss43Q76HL1 382 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Tas2r104Q7M723 302 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Nsun6Q7TS68 476 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Ticam1Q80UF7 732 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 RinlQ80UW3 563 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Ubap2lQ80X50 1107 aaKnown RBP8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Poldip3Q8BG81 420 aaKnown RBP8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Acnat2Q8BGG9 420 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Armcx3Q8BHS6 379 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Gga3Q8BMI3 718 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Rccd1Q8BTU7 377 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Klhl7Q8BUL5 586 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Ube3dQ8BX13 368 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Fam160b1Q8CDM8 764 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Pym1Q8CHP5 203 aaKnown RBP8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Adgrg3Q8R0T6 542 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 ClyblQ8R4N0 338 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Olfr353Q8VGK0 311 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Olfr1389Q8VGX0 311 aa8.92□□□□□ -0.98
Upf3b-201ENSMUST00000076265 Ndufv1Q91YT0 464 aa8.92□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 20 ms