RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Hrh2P97292 397 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Krt76Q3UV17 594 aaKnown RBP11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Mrm3Q5ND52 418 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Six1Q62231 284 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Tas2r38Q7TQA6 331 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Efhd2Q9D8Y0 240 aaKnown RBP11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Skint1A7TZE6 364 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Tas2r122D3YU55 309 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Slc6a2O55192 617 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Cd40lgP27548 260 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 CtswP56203 371 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Pkp4Q68FH0 1190 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Zc3h11aQ6NZF1 792 aaKnown RBP11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Prrt3Q6PE13 971 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Mrps7Q80X85 242 aaKnown RBP11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Fam109aQ8BH49 266 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Tyw3Q8BSA9 257 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Zfp940Q8R2Q3 566 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Hkdc1Q91W97 915 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Insl5Q9WUG6 135 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Fam155bA2BDP1 471 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Ccnd1P25322 295 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Idh2P54071 452 aaKnown RBP11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Bpifa6Q0VGU8 367 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Tead4Q62296 427 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Otud6aQ6IE21 290 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Ptx4Q6RUU0 478 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Phf21aQ6ZPK0 659 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Chrnb3Q8BMN3 464 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Trpv3Q8K424 791 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Hbp1Q8R316 516 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Hspa14Q99M31 509 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Ankrd61Q9CQM6 421 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Acbd7Q9D258 88 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Nkx2-4Q9EQM3 354 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Ndrg2Q9QYG0 371 aaKnown RBP11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Mrpl40Q9Z2Q5 206 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Spin2dB1B0R2 236 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Gm7275E9Q1B3 247 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Vmn2r31L7N1Z4 861 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 FkbplO35450 347 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 RngttO55236 597 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 GzmgP13366 248 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Lrpap1P55302 360 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Q3UTZ3 580 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Rabl6Q5U3K5 725 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 IpmkQ7TT16 396 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Nck1Q99M51 377 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Exo5Q9CXP9 373 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 S100a9P31725 113 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Tmem173Q3TBT3 378 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Elf3Q3UPW2 391 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Sema4aQ62178 760 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Six3Q62233 333 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 N4bp1Q6A037 893 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Ptk7Q8BKG3 1062 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 DrgxQ8BYH0 263 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Atg14Q8CDJ3 492 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Polr1eQ8K202 482 aaKnown RBP11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Ddx1Q91VR5 740 aaKnown RBP11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Klk6Q91Y82 253 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Pdia5Q921X9 517 aa11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Q9CWU4 180 aaKnown RBP11.69□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Gm12248A0A1W2P8B8 313 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Gm13088A2AGW6 460 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Vmn2r24D3YUI0 854 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Ebf3O08791 596 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 FynP39688 537 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Il12aP43431 215 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Rpl26P61255 145 aaKnown RBP11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Zc3h12aQ5D1E7 596 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Mup21Q80YX8 181 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Taldo1Q93092 337 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Nfs1Q9Z1J3 459 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Keap1Q9Z2X8 624 aaKnown RBP11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Gm5538W4VSP6 401 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Sgo2bJ3QMK1 1167 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Hnf1bP27889 558 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Tnfsf9P41274 309 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Trpv5P69744 723 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Sox4Q06831 440 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Ica1lQ3TY65 431 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Slc6a15Q8BG16 729 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Q8BZE1 841 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Fads1Q920L1 447 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 PaicsQ9DCL9 425 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Slc19a2Q9EQN9 498 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Trhr2Q9ERT2 382 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Chrac1Q9JKP8 129 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Col22a1E9Q7P1 1613 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Mtcl1Q3UHU5 1945 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 TagapB2RWW0 714 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Phf11bB4XVQ1 276 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Rgsl1H3BL40 1073 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Gm2888K7N746 267 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Larp7Q05CL8 570 aaKnown RBP11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 TtpaQ8BWP5 278 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Nusap1Q9ERH4 427 aaKnown RBP11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 AnkhQ9JHZ2 492 aa11.68□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Sars2Q9JJL8 518 aa11.68□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 32.8 ms