RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Kcna10B2RQA1 511 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Sec14l5B2RXM5 696 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Olfr171G5E8J1 314 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Rps3aP97351 264 aaKnown RBP12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Kcnab3P97382 249 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Mief1Q8BGV8 463 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Hs3st5Q8BSL4 346 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 ReltQ8BX43 436 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Blzf1Q8R2X8 403 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Pqbp1Q91VJ5 263 aaKnown RBP12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Dusp26Q9D700 211 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Tmem174Q9DCX7 243 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Tubb3Q9ERD7 450 aa12.56□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Zcchc7B1AX39 541 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Nsmce4aG3XA30 381 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Pot1bH7BX60 640 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 SpibO35906 267 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Cops4O88544 406 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Slc2a7P0C6A1 513 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 TpbpaP13438 124 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Srp54P14576 504 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 AhcyP50247 432 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Drd4P51436 387 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 CkbQ04447 381 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Yy2Q3TTC2 378 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Armc7Q3UJZ3 198 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 AbrQ5SSL4 859 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Gba2Q69ZF3 918 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 ChpfQ6IQX7 774 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Msantd1Q8BIL2 278 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Pdcd2lQ8C5N5 364 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 H2afy2Q8CCK0 372 aaKnown RBP12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Ces2aQ8QZR3 558 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 2010005H15RikQ9D8D6 97 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Oxct2bQ9ESL0 520 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Oxct2aQ9JJN4 520 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Cdh17Q9R100 827 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Orc6Q9WUJ8 262 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Bag6Q9Z1R2 1154 aaKnown RBP12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Gm6592A2AHC7 168 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Gosr2O35166 212 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 CfhP06909 1234 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Atxn1lP0C7T6 687 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 MutP16332 748 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Esr1P19785 599 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 WarsP32921 481 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Igfbp5Q07079 271 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Abcb7Q61102 752 aaKnown RBP12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Rapgefl1Q68EF8 662 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Atg16l2Q6KAU8 623 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Lair1Q8BG84 263 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 1700020N01RikQ8CF20 87 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Rcor1Q8CFE3 480 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Hmgcs1Q8JZK9 520 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Gin1Q8K259 518 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Satb2Q8VI24 733 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Slc35b2Q91ZN5 431 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Kat8Q9D1P2 458 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Sbk3P0C5K0 361 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 CtswP56203 371 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Rps24P62849 133 aaKnown RBP12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 KrtdapQ3V2T4 102 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 MlipQ5FW52 269 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Mxd4Q60948 209 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 FaddQ61160 205 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Q6PAC4 1279 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Defb34Q7TNV8 81 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Zfp940Q8R2Q3 566 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Olfr541Q8VGM0 312 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Snx4Q91YJ2 450 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Pin4Q9CWW6 131 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Cxxc1Q9CWW7 660 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 PacrglQ9D3X5 248 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Glod5Q9D8I3 148 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Dclre1aQ9JIC3 1026 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Rpl9-ps1S4R1R7 191 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Cyp4a29A0A087WPC3 509 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Spin2-ps6A0A140T8V2 174 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Sod3O09164 251 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Serpinb2P12388 415 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Tap2P36371 702 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Eci1P42125 289 aaKnown RBP12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Gabrb3P63080 473 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Smpdl3aP70158 445 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Q810N5 247 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Mapre2Q8R001 326 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Ptbp2Q91Z31 531 aaKnown RBP12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Tomm70Q9CZW5 611 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Apbb2Q9DBR4 760 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Tor1aQ9ER39 333 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Rfc2Q9WUK4 349 aaKnown RBP12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Pld1Q9Z280 1074 aa12.55□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Gm12248A0A1W2P8B8 313 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Olfr1215A3KGY3 312 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Akain1G3UWD5 69 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Kdelc2G5E897 503 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Pim1P06803 397 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Hcrtr1P58307 416 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 TekQ02858 1122 aa12.54□□□□□ -0.4
Clcn3-201ENSMUST00000004430 Eif2ak2Q03963 515 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 31.4 ms