RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 ATP1A1-AS1Q5TC04 95 aa17.27■□□□□ 0.36
PNKP-230ENST00000638016 ZNF534Q76KX8 674 aa17.27■□□□□ 0.36
PNKP-230ENST00000638016 GALNT6Q8NCL4 622 aa17.27■□□□□ 0.36
PNKP-230ENST00000638016 OR4E2Q8NGC2 313 aa17.27■□□□□ 0.36
PNKP-230ENST00000638016 CCM2Q9BSQ5 444 aa17.27■□□□□ 0.36
PNKP-230ENST00000638016 HRASLS2Q9NWW9 162 aa17.27■□□□□ 0.36
PNKP-230ENST00000638016 HEATR9A2RTY3 570 aa17.26■□□□□ 0.35
PNKP-230ENST00000638016 ERI2A8K979 691 aaKnown RBP17.26■□□□□ 0.35
PNKP-230ENST00000638016 TOX3O15405 576 aaPredicted RBP17.26■□□□□ 0.35
PNKP-230ENST00000638016 NKX2-8O15522 239 aa17.26■□□□□ 0.35
PNKP-230ENST00000638016 KIAA0754O94854 1291 aa17.26■□□□□ 0.35
PNKP-230ENST00000638016 ITGB6P18564 788 aa17.26■□□□□ 0.35
PNKP-230ENST00000638016 NELFEP18615 380 aaKnown RBP17.26■□□□□ 0.35
PNKP-230ENST00000638016 POLR2CP19387 275 aaPredicted RBP17.26■□□□□ 0.35
PNKP-230ENST00000638016 F8A1P23610 371 aa17.26■□□□□ 0.35
PNKP-230ENST00000638016 PRKG2Q13237 762 aa17.26■□□□□ 0.35
PNKP-230ENST00000638016 CCNG2Q16589 344 aa17.26■□□□□ 0.35
PNKP-230ENST00000638016 DNTTIP2Q5QJE6 756 aaKnown RBP17.26■□□□□ 0.35
PNKP-230ENST00000638016 LDB1Q86U70 411 aaPredicted RBP17.26■□□□□ 0.35
PNKP-230ENST00000638016 OOSP2Q86WS3 158 aa17.26■□□□□ 0.35
PNKP-230ENST00000638016 LKAAEAR1Q8TD35 194 aa17.26■□□□□ 0.35
PNKP-230ENST00000638016 WBP1Q96G27 269 aa17.26■□□□□ 0.35
PNKP-230ENST00000638016 SLC41A2Q96JW4 573 aa17.26■□□□□ 0.35
PNKP-230ENST00000638016 FERD3LQ96RJ6 166 aa17.26■□□□□ 0.35
PNKP-230ENST00000638016 HGH1Q9BTY7 390 aa17.26■□□□□ 0.35
PNKP-230ENST00000638016 XKR8Q9H6D3 395 aa17.26■□□□□ 0.35
PNKP-230ENST00000638016 GPN2Q9H9Y4 310 aaPredicted RBP17.26■□□□□ 0.35
PNKP-230ENST00000638016 SEMA5BQ9P283 1151 aa17.26■□□□□ 0.35
PNKP-230ENST00000638016 PAK5Q9P286 719 aa17.26■□□□□ 0.35
PNKP-230ENST00000638016 TCAF1Q9Y4C2 921 aa17.26■□□□□ 0.35
PNKP-230ENST00000638016 BOD1L1Q8NFC6 3051 aa17.26■□□□□ 0.35
PNKP-230ENST00000638016 C17orf113A0A1B0GUU1 675 aa17.25■□□□□ 0.35
PNKP-230ENST00000638016 TCRBV7S3A2A0A539 114 aa17.25■□□□□ 0.35
PNKP-230ENST00000638016 PRKAR1AP10644 381 aa17.25■□□□□ 0.35
PNKP-230ENST00000638016 SESN2P58004 480 aaPredicted RBP17.25■□□□□ 0.35
PNKP-230ENST00000638016 BASP1P80723 227 aaKnown RBP17.25■□□□□ 0.35
PNKP-230ENST00000638016 KRT33BQ14525 404 aa17.25■□□□□ 0.35
PNKP-230ENST00000638016 TRIP13Q15645 432 aaPredicted RBP17.25■□□□□ 0.35
PNKP-230ENST00000638016 SKIDA1Q1XH10 827 aa17.25■□□□□ 0.35
PNKP-230ENST00000638016 RASGRP3Q8IV61 690 aa17.25■□□□□ 0.35
PNKP-230ENST00000638016 PRELID2Q8N945 189 aa17.25■□□□□ 0.35
PNKP-230ENST00000638016 ZSCAN1Q8NBB4 408 aa17.25■□□□□ 0.35
PNKP-230ENST00000638016 SIDT2Q8NBJ9 832 aaKnown RBP17.25■□□□□ 0.35
PNKP-230ENST00000638016 TRIM58Q8NG06 486 aa17.25■□□□□ 0.35
PNKP-230ENST00000638016 HEXDCQ8WVB3 486 aa17.25■□□□□ 0.35
PNKP-230ENST00000638016 RANBP9Q96S59 729 aa17.25■□□□□ 0.35
PNKP-230ENST00000638016 ZPBPQ9BS86 351 aa17.25■□□□□ 0.35
PNKP-230ENST00000638016 CHRAC1Q9NRG0 131 aa17.25■□□□□ 0.35
PNKP-230ENST00000638016 MARCH4Q9P2E8 410 aaPredicted RBP17.25■□□□□ 0.35
PNKP-230ENST00000638016 LNPEPQ9UIQ6 1025 aa17.25■□□□□ 0.35
PNKP-230ENST00000638016 TLN1Q9Y490 2541 aaKnown RBP17.24■□□□□ 0.35
PNKP-230ENST00000638016 SNRNP200O75643 2136 aaKnown RBP17.24■□□□□ 0.35
PNKP-230ENST00000638016 UBA6A0AVT1 1052 aaPredicted RBP17.24■□□□□ 0.35
PNKP-230ENST00000638016 KLHL33A6NCF5 533 aa17.24■□□□□ 0.35
PNKP-230ENST00000638016 TLCD2A6NGC4 264 aa17.24■□□□□ 0.35
PNKP-230ENST00000638016 PYCARD-AS1I3L0S3 204 aa17.24■□□□□ 0.35
PNKP-230ENST00000638016 BTN3A3O00478 584 aa17.24■□□□□ 0.35
PNKP-230ENST00000638016 SPAG6O75602 509 aa17.24■□□□□ 0.35
PNKP-230ENST00000638016 FGF5P12034 268 aa17.24■□□□□ 0.35
PNKP-230ENST00000638016 ADRA1DP25100 572 aa17.24■□□□□ 0.35
PNKP-230ENST00000638016 STAT5AP42229 794 aa17.24■□□□□ 0.35
PNKP-230ENST00000638016 VPS41P49754 854 aa17.24■□□□□ 0.35
PNKP-230ENST00000638016 CSE1LP55060 971 aaKnown RBP17.24■□□□□ 0.35
PNKP-230ENST00000638016 ACVR1Q04771 509 aa17.24■□□□□ 0.35
PNKP-230ENST00000638016 TUBB3Q13509 450 aa17.24■□□□□ 0.35
PNKP-230ENST00000638016 ITIH4Q14624 930 aa17.24■□□□□ 0.35
PNKP-230ENST00000638016 GPR19Q15760 415 aa17.24■□□□□ 0.35
PNKP-230ENST00000638016 DRICH1Q6PGQ1 229 aaPredicted RBP17.24■□□□□ 0.35
PNKP-230ENST00000638016 AFTPHQ6ULP2 937 aa17.24■□□□□ 0.35
PNKP-230ENST00000638016 OR52E1Q8NGJ3 308 aa17.24■□□□□ 0.35
PNKP-230ENST00000638016 OR6P1Q8NGX9 317 aa17.24■□□□□ 0.35
PNKP-230ENST00000638016 ELMO1Q92556 727 aa17.24■□□□□ 0.35
PNKP-230ENST00000638016 UBXN4Q92575 508 aa17.24■□□□□ 0.35
PNKP-230ENST00000638016 MED8Q96G25 268 aa17.24■□□□□ 0.35
PNKP-230ENST00000638016 MS4A14Q96JA4 679 aa17.24■□□□□ 0.35
PNKP-230ENST00000638016 RUFY1Q96T51 708 aa17.24■□□□□ 0.35
PNKP-230ENST00000638016 KLHL25Q9H0H3 589 aa17.24■□□□□ 0.35
PNKP-230ENST00000638016 AKIRIN1Q9H9L7 192 aaPredicted RBP17.24■□□□□ 0.35
PNKP-230ENST00000638016 TTC7AQ9ULT0 858 aaPredicted RBP17.24■□□□□ 0.35
PNKP-230ENST00000638016 RPS6KL1Q9Y6S9 549 aa17.24■□□□□ 0.35
PNKP-230ENST00000638016 SPTA1P02549 2419 aa17.23■□□□□ 0.35
PNKP-230ENST00000638016 HELZ2Q9BYK8 2649 aaKnown RBP17.23■□□□□ 0.35
PNKP-230ENST00000638016 GCN1Q92616 2671 aaKnown RBP17.23■□□□□ 0.35
PNKP-230ENST00000638016 GSAPA4D1B5 854 aa17.23■□□□□ 0.35
PNKP-230ENST00000638016 IQCF5A8MTL0 148 aa17.23■□□□□ 0.35
PNKP-230ENST00000638016 BTN3A1O00481 513 aa17.23■□□□□ 0.35
PNKP-230ENST00000638016 GAS8O95995 478 aa17.23■□□□□ 0.35
PNKP-230ENST00000638016 MAP4P27816 1152 aaKnown RBP17.23■□□□□ 0.35
PNKP-230ENST00000638016 OAS2P29728 719 aaKnown RBP17.23■□□□□ 0.35
PNKP-230ENST00000638016 NSG1P42857 185 aa17.23■□□□□ 0.35
PNKP-230ENST00000638016 NFKB2Q00653 900 aa17.23■□□□□ 0.35
PNKP-230ENST00000638016 ABHD18Q0P651 414 aa17.23■□□□□ 0.35
PNKP-230ENST00000638016 BOP1Q14137 746 aaKnown RBP17.23■□□□□ 0.35
PNKP-230ENST00000638016 PRAMEF17Q5VTA0 474 aa17.23■□□□□ 0.35
PNKP-230ENST00000638016 PWWP2BQ6NUJ5 590 aa17.23■□□□□ 0.35
PNKP-230ENST00000638016 TTC27Q6P3X3 843 aa17.23■□□□□ 0.35
PNKP-230ENST00000638016 KLHL35Q6PF15 583 aa17.23■□□□□ 0.35
PNKP-230ENST00000638016 CES3Q6UWW8 571 aa17.23■□□□□ 0.35
PNKP-230ENST00000638016 PACS1Q6VY07 963 aa17.23■□□□□ 0.35
PNKP-230ENST00000638016 GSTA5Q7RTV2 222 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms