RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 TBC1D29Q9UFV1 150 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 CNOT6Q9ULM6 557 aaKnown RBP12.42□□□□□ -0.42
CTSD-208ENST00000636843 TTLL3Q9Y4R7 772 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 OAS3Q9Y6K5 1087 aaKnown RBP12.42□□□□□ -0.42
CTSD-208ENST00000636843 KIR2DS5A0A0G2JLQ3 304 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 A0A0G2JNG1 304 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 C1orf232A0A0U1RR37 186 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 TMEM120BA0PK00 339 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 OR5K4A6NMS3 321 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 KIR2DS3K7RE56 304 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 STK10O94804 968 aaKnown RBP12.42□□□□□ -0.42
CTSD-208ENST00000636843 EML2O95834 649 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 GSTA2P09210 222 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 BRAFP15056 766 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 GCAP28676 217 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 FDFT1P37268 417 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 CCR10P46092 362 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 SPINT3P49223 89 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 POLE2P56282 527 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 SLC10A2Q12908 348 aaPredicted RBP12.42□□□□□ -0.42
CTSD-208ENST00000636843 KCNAB2Q13303 367 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 NFATC2Q13469 925 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 KIR2DS5Q14953 304 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 PDK1Q15118 436 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 TMED2Q15363 201 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 MSS51Q4VC12 460 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 SNAP47Q5SQN1 464 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 ARHGEF18Q6ZSZ5 1173 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 C3orf62Q6ZUJ4 267 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 LYSMD3Q7Z3D4 306 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 NLGN4XQ8N0W4 816 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 CYP4X1Q8N118 509 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 LPCAT1Q8NF37 534 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 NLGN4YQ8NFZ3 816 aaPredicted RBP12.42□□□□□ -0.42
CTSD-208ENST00000636843 NCSTNQ92542 709 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 KIAA1143Q96AT1 154 aaPredicted RBP12.42□□□□□ -0.42
CTSD-208ENST00000636843 RABEP2Q9H5N1 569 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 ACSS3Q9H6R3 686 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 PSMC3IPQ9P2W1 217 aaPredicted RBP12.42□□□□□ -0.42
CTSD-208ENST00000636843 TBK1Q9UHD2 729 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 PRKAB1Q9Y478 270 aa12.42□□□□□ -0.42
CTSD-208ENST00000636843 HECTD1Q9ULT8 2610 aa12.41□□□□□ -0.42
CTSD-208ENST00000636843 A6NCN8 305 aa12.41□□□□□ -0.42
CTSD-208ENST00000636843 A8MU76 341 aa12.41□□□□□ -0.42
CTSD-208ENST00000636843 ANKRD66B4E2M5 251 aa12.41□□□□□ -0.42
CTSD-208ENST00000636843 POC1B-GALNT4F8VUJ3 575 aa12.41□□□□□ -0.42
CTSD-208ENST00000636843 PPP1R12AO14974 1030 aaPredicted RBP12.41□□□□□ -0.42
CTSD-208ENST00000636843 HLA-DQB2P05538 268 aa12.41□□□□□ -0.42
CTSD-208ENST00000636843 F3P13726 295 aa12.41□□□□□ -0.42
CTSD-208ENST00000636843 SLC18A1P54219 525 aa12.41□□□□□ -0.42
CTSD-208ENST00000636843 NIPAL4Q0D2K0 466 aa12.41□□□□□ -0.42
CTSD-208ENST00000636843 ABHD18Q0P651 414 aa12.41□□□□□ -0.42
CTSD-208ENST00000636843 QPCTQ16769 361 aa12.41□□□□□ -0.42
CTSD-208ENST00000636843 HP1BP3Q5SSJ5 553 aaPredicted RBP12.41□□□□□ -0.42
CTSD-208ENST00000636843 CPLX4Q7Z7G2 160 aa12.41□□□□□ -0.42
CTSD-208ENST00000636843 TRABD2AQ86V40 505 aa12.41□□□□□ -0.42
CTSD-208ENST00000636843 MLPHQ9BV36 600 aaPredicted RBP12.41□□□□□ -0.42
CTSD-208ENST00000636843 NSRP1Q9H0G5 558 aaKnown RBP12.41□□□□□ -0.42
CTSD-208ENST00000636843 GPN2Q9H9Y4 310 aaPredicted RBP12.41□□□□□ -0.42
CTSD-208ENST00000636843 ETNK1Q9HBU6 452 aa12.41□□□□□ -0.42
CTSD-208ENST00000636843 KCNK9Q9NPC2 374 aa12.41□□□□□ -0.42
CTSD-208ENST00000636843 NKIRAS1Q9NYS0 192 aa12.41□□□□□ -0.42
CTSD-208ENST00000636843 KCNK6Q9Y257 313 aa12.41□□□□□ -0.42
CTSD-208ENST00000636843 TMEM184BQ9Y519 407 aaPredicted RBP12.41□□□□□ -0.42
CTSD-208ENST00000636843 PCYT1BQ9Y5K3 369 aaPredicted RBP12.41□□□□□ -0.42
CTSD-208ENST00000636843 TEX264Q9Y6I9 313 aa12.41□□□□□ -0.42
CTSD-208ENST00000636843 MAST4O15021 2626 aa12.41□□□□□ -0.42
CTSD-208ENST00000636843 LILRA5A6NI73 299 aa12.4□□□□□ -0.42
CTSD-208ENST00000636843 FADS2P1A8MWK0 482 aa12.4□□□□□ -0.42
CTSD-208ENST00000636843 NUAK1O60285 661 aa12.4□□□□□ -0.42
CTSD-208ENST00000636843 SNX2O60749 519 aa12.4□□□□□ -0.42
CTSD-208ENST00000636843 BANF1O75531 89 aa12.4□□□□□ -0.42
CTSD-208ENST00000636843 ACP5P13686 325 aa12.4□□□□□ -0.42
CTSD-208ENST00000636843 DRD4P21917 467 aa12.4□□□□□ -0.42
CTSD-208ENST00000636843 SSTR1P30872 391 aa12.4□□□□□ -0.42
CTSD-208ENST00000636843 ELK3P41970 407 aa12.4□□□□□ -0.42
CTSD-208ENST00000636843 CLCNKAP51800 687 aa12.4□□□□□ -0.42
CTSD-208ENST00000636843 SARNPP82979 210 aaKnown RBP12.4□□□□□ -0.42
CTSD-208ENST00000636843 CDK16Q00536 496 aa12.4□□□□□ -0.42
CTSD-208ENST00000636843 MC1RQ01726 317 aa12.4□□□□□ -0.42
CTSD-208ENST00000636843 TLE1Q04724 770 aa12.4□□□□□ -0.42
CTSD-208ENST00000636843 SEMA5AQ13591 1074 aa12.4□□□□□ -0.42
CTSD-208ENST00000636843 PRKD1Q15139 912 aaPredicted RBP12.4□□□□□ -0.42
CTSD-208ENST00000636843 ADGRD1Q6QNK2 874 aa12.4□□□□□ -0.42
CTSD-208ENST00000636843 PLXDC1Q8IUK5 500 aa12.4□□□□□ -0.42
CTSD-208ENST00000636843 PHYKPLQ8IUZ5 450 aa12.4□□□□□ -0.42
CTSD-208ENST00000636843 SRRM1Q8IYB3 904 aaKnown RBP12.4□□□□□ -0.42
CTSD-208ENST00000636843 TAB3Q8N5C8 712 aaPredicted RBP12.4□□□□□ -0.42
CTSD-208ENST00000636843 CCNYQ8ND76 341 aa12.4□□□□□ -0.42
CTSD-208ENST00000636843 CCDC110Q8TBZ0 833 aa12.4□□□□□ -0.42
CTSD-208ENST00000636843 FBF1Q8TES7 1133 aa12.4□□□□□ -0.42
CTSD-208ENST00000636843 DYDC1Q8WWB3 177 aa12.4□□□□□ -0.42
CTSD-208ENST00000636843 HDAC11Q96DB2 347 aa12.4□□□□□ -0.42
CTSD-208ENST00000636843 SGSM3Q96HU1 749 aa12.4□□□□□ -0.42
CTSD-208ENST00000636843 ZNF317Q96PQ6 595 aaPredicted RBP12.4□□□□□ -0.42
CTSD-208ENST00000636843 CYTH2Q99418 400 aa12.4□□□□□ -0.42
CTSD-208ENST00000636843 DHRS4Q9BTZ2 278 aa12.4□□□□□ -0.42
CTSD-208ENST00000636843 ADGRE3Q9BY15 652 aa12.4□□□□□ -0.42
CTSD-208ENST00000636843 BRD8Q9H0E9 1235 aa12.4□□□□□ -0.42
CTSD-208ENST00000636843 UCK1Q9HA47 277 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms