RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 KLRK1P26718 216 aa17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 OR12D2P58182 307 aa17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 LAPTM5Q13571 262 aa17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 IL1RAPQ9NPH3 570 aa17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 REREQ9P2R6 1566 aa17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 A0A1B0GVC2 190 aa17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 TNFRSF10BO14763 440 aa17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 GNAO1P09471 354 aa17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 PTDSS1P48651 473 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 ELP6Q0PNE2 266 aa17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 ILF3Q12906 894 aaKnown RBP eCLIP17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 OR2T12Q8NG77 320 aa17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 TCF12Q99081 682 aa17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 KCTD5Q9NXV2 234 aa17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 CDK14O94921 469 aa17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 RPP14O95059 124 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 LACTB2Q53H82 288 aaPredicted RBP17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 ABHD13Q7L211 337 aa17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 ZBTB2Q8N680 514 aa17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 Q8N9G6 341 aaPredicted RBP17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 C7orf57Q8NEG2 295 aa17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 TBC1D15Q8TC07 691 aa17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 DMRTB1Q96MA1 342 aa17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 ZNF649Q9BS31 505 aa17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 ACSS2Q9NR19 701 aa17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 ZNF12P17014 697 aa17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 RPIAP49247 311 aa17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 DGKEP52429 567 aa17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 RAB12Q6IQ22 244 aa17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 SPATA19Q7Z5L4 167 aa17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 SPAG16Q8N0X2 631 aa17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 NXPE1Q8N323 547 aa17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 TMEM156Q8N614 296 aa17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 TRMT10AQ8TBZ6 339 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 GPATCH1Q9BRR8 931 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 RC3H2Q9HBD1 1191 aaKnown RBP17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 TMX2Q9Y320 296 aa17.3■□□□□ 0.36
CACNA1A-225ENST00000636389 EFNA1P20827 205 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 GABBR2O75899 941 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 PTGS2P35354 604 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 ZNF311Q5JNZ3 666 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 GK5Q6ZS86 529 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 HM13Q8TCT9 377 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 CNDP2Q96KP4 475 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 SMURF2Q9HAU4 748 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 MAGEL2Q9UJ55 1249 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 DKKL1Q9UK85 242 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 HEBP2Q9Y5Z4 205 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 ARPC2O15144 300 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 HCAR3P49019 387 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 PLA2G16P53816 162 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 NFATC2Q13469 925 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 ENPP2Q13822 863 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 CCDC107Q8WV48 283 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 TRAF6Q9Y4K3 522 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 CLTCQ00610 1675 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 NPIPA5E9PKD4 350 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 MT-CYBP00156 380 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 RAB4AP20338 218 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 STOMP27105 288 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 CDKN1CP49918 316 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 EIPR1Q53HC9 387 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 ZNF554Q86TJ5 538 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 CD300LFQ8TDQ1 290 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 HNRNPLLQ8WVV9 542 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 CAVIN3Q969G5 261 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 NPIPA1Q9UND3 350 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 CHD4Q14839 1912 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 TMEM150CB9EJG8 249 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 PAGE1O75459 146 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 PRLP01236 227 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 NR4A1P22736 598 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 ACSL1P33121 698 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 CDH11P55287 796 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 FN3KQ9H479 309 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 FOXR2Q6PJQ5 311 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 SLC38A4Q969I6 547 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 P2RX7Q99572 595 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 NELFAQ9H3P2 528 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 AGO3Q9H9G7 860 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 KCNN3Q9UGI6 736 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 AP4B1Q9Y6B7 739 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 A0A0G2JPF8 293 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 HNRNPCL3B7ZW38 293 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 PRAMEF12O95522 483 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 HNRNPCL4P0DMR1 293 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 CLEC12AQ5QGZ9 265 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 LINGO4Q6UY18 593 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 ZYG11AQ6WRX3 759 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 LRRC20Q8TCA0 184 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 THEM6Q8WUY1 208 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 HMGB4Q8WW32 186 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 PHB2Q99623 299 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 LRMDAQ9H2I8 198 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 SNX15Q9NRS6 342 aa17.29■□□□□ 0.36
CACNA1A-225ENST00000636389 GLI2P10070 1586 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 MAPTP10636 758 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 PLGLAQ15195 96 aa17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 CRTC2Q53ET0 693 aaPredicted RBP17.28■□□□□ 0.36
CACNA1A-225ENST00000636389 DHDDSQ86SQ9 333 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms