RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 SELLP14151 372 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 CTPS1P17812 591 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 EDN2P20800 178 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 SAT1P21673 171 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 TBXAS1P24557 533 aaPredicted RBP2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 SLC16A2P36021 539 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 GPR12P47775 334 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 HSD17B4P51659 736 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 F2RL1P55085 397 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 CCL23P55773 120 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 CLDN2P57739 230 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 KRTAP10-3P60369 221 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 YPEL5P62699 121 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 DEFB103AP81534 67 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 ROR1Q01973 937 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 CFHR1Q03591 330 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 LRMPQ12912 555 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 PKP1Q13835 747 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 PCLAFQ15004 111 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 NTRK2Q16620 822 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 SOWAHCQ53LP3 525 aaPredicted RBP2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 CXorf66Q5JRM2 361 aaPredicted RBP2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 ZNF324BQ6AW86 544 aaPredicted RBP2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 ISM2Q6H9L7 571 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 NCAPH2Q6IBW4 605 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 ZSCAN25Q6NSZ9 544 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 ZNF589Q86UQ0 364 aaPredicted RBP2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 CCDC25Q86WR0 208 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 TBC1D10CQ8IV04 446 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 DHX40Q8IX18 779 aaKnown RBP2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 KIAA2013Q8IYS2 634 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 FAM185AQ8N0U4 392 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 ARFGAP1Q8N6T3 406 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 MCPH1Q8NEM0 835 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 OSR1Q8TAX0 266 aaPredicted RBP2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 AFAP1L1Q8TED9 768 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 SLC22A18Q96BI1 424 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 ARHGEF26Q96DR7 871 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 PABPC5Q96DU9 382 aaKnown RBP2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 RADILQ96JH8 1075 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 CNDP2Q96KP4 475 aaKnown RBP2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 TMEM68Q96MH6 324 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 TTC14Q96N46 770 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 ZMAT2Q96NC0 199 aaKnown RBP2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 PIMREGQ9BSJ6 248 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 LRRCC1Q9C099 1032 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 MTIF3Q9H2K0 278 aaKnown RBP2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 DCTPP1Q9H773 170 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 KIF9Q9HAQ2 790 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 SLC28A3Q9HAS3 691 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 WDR6Q9NNW5 1121 aaKnown RBP2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 PAPOLBQ9NRJ5 636 aaKnown RBP2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 TCP11L1Q9NUJ3 509 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 MRPL15Q9P015 296 aaKnown RBP2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 MARCH4Q9P2E8 410 aaPredicted RBP2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 CLIP2Q9UDT6 1046 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 FBXL17Q9UF56 701 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 NOL7Q9UMY1 257 aaKnown RBP2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 COG5Q9UP83 839 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 LAMP3Q9UQV4 416 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 AAR2Q9Y312 384 aaKnown RBP2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 FAM96BQ9Y3D0 163 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 MYO7AQ13402 2215 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 RIF1Q5UIP0 2472 aaKnown RBP2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 KIF26BQ2KJY2 2108 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 CEP250Q9BV73 2442 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 KALRNO60229 2985 aa2.51□□□□□ -2.01
SMARCB1-208ENST00000634926 NEDD4P46934 1319 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 SPENQ96T58 3664 aaKnown RBP2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 OTOGLQ3ZCN5 2332 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 A0A0D9SFI3 127 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 KIR2DS5A0A0G2JLQ3 304 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 LINC01553A4QN01 128 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 GLOD5A6NK44 160 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 C2CD4BA6NLJ0 364 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 KLRF2D3W0D1 207 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 C5orf67F2Z3F1 127 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 KIR2DS3K7RE56 304 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 IFNL4K9M1U5 179 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 RHODO00212 210 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 UBE2CO00762 179 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 CTDSP2O14595 271 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 PRPF4O43172 522 aaKnown RBP eCLIP2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 SLC25A17O43808 307 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 SLC25A12O75746 678 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 RPN1P04843 607 aaKnown RBP2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 APOA4P06727 396 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 PCP11498 1178 aaKnown RBP2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 ZNF182P17025 639 aaPredicted RBP2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 TMEM11P17152 192 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 SRD5A1P18405 259 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 ITGAXP20702 1163 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 AGAP20933 346 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 MCCP23508 829 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 SLC1A4P43007 532 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 SLC15A1P46059 708 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 TDO2P48775 406 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 CXCR3P49682 368 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 NT5C2P49902 561 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 MRPL12P52815 198 aaKnown RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms