RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 PKMP14618 531 aaKnown RBP18.28■□□□□ 0.52
PNKP-224ENST00000631020 PTRHD1Q6GMV3 140 aaKnown RBP18.28■□□□□ 0.52
PNKP-224ENST00000631020 ZC3HC1Q86WB0 502 aaKnown RBP18.28■□□□□ 0.52
PNKP-224ENST00000631020 SPNS2Q8IVW8 549 aa18.28■□□□□ 0.52
PNKP-224ENST00000631020 OR6C4Q8NGE1 309 aa18.28■□□□□ 0.52
PNKP-224ENST00000631020 SNIP1Q8TAD8 396 aaKnown RBP18.28■□□□□ 0.52
PNKP-224ENST00000631020 CYTH2Q99418 400 aa18.28■□□□□ 0.52
PNKP-224ENST00000631020 TIMM29Q9BSF4 260 aa18.28■□□□□ 0.52
PNKP-224ENST00000631020 CCM2Q9BSQ5 444 aa18.28■□□□□ 0.52
PNKP-224ENST00000631020 KLC4Q9NSK0 619 aa18.28■□□□□ 0.52
PNKP-224ENST00000631020 GALPQ9UBC7 116 aa18.28■□□□□ 0.52
PNKP-224ENST00000631020 PADI4Q9UM07 663 aa18.28■□□□□ 0.52
PNKP-224ENST00000631020 DNAJC16Q9Y2G8 782 aa18.28■□□□□ 0.52
PNKP-224ENST00000631020 MED16Q9Y2X0 877 aa18.28■□□□□ 0.52
PNKP-224ENST00000631020 PCDHB1Q9Y5F3 818 aa18.28■□□□□ 0.52
PNKP-224ENST00000631020 A0A087WUV0 522 aaPredicted RBP18.27■□□□□ 0.51
PNKP-224ENST00000631020 MGAT4DA6NG13 374 aa18.27■□□□□ 0.51
PNKP-224ENST00000631020 NIPSNAP2O75323 286 aa18.27■□□□□ 0.51
PNKP-224ENST00000631020 ITGB6P18564 788 aa18.27■□□□□ 0.51
PNKP-224ENST00000631020 PBLDP30039 288 aaPredicted RBP18.27■□□□□ 0.51
PNKP-224ENST00000631020 CD151P48509 253 aa18.27■□□□□ 0.51
PNKP-224ENST00000631020 TIAL1Q01085 375 aaKnown RBP eCLIP18.27■□□□□ 0.51
PNKP-224ENST00000631020 LRP8Q14114 963 aa18.27■□□□□ 0.51
PNKP-224ENST00000631020 INSCQ1MX18 579 aa18.27■□□□□ 0.51
PNKP-224ENST00000631020 NAPRTQ6XQN6 538 aa18.27■□□□□ 0.51
PNKP-224ENST00000631020 FAM83HQ6ZRV2 1179 aaPredicted RBP18.27■□□□□ 0.51
PNKP-224ENST00000631020 AMZ2Q86W34 360 aa18.27■□□□□ 0.51
PNKP-224ENST00000631020 LSMEM2Q8N112 164 aa18.27■□□□□ 0.51
PNKP-224ENST00000631020 LILRA3Q8N6C8 439 aaPredicted RBP18.27■□□□□ 0.51
PNKP-224ENST00000631020 ACVR1CQ8NER5 493 aa18.27■□□□□ 0.51
PNKP-224ENST00000631020 OR2L2Q8NH16 312 aa18.27■□□□□ 0.51
PNKP-224ENST00000631020 UBLCP1Q8WVY7 318 aaPredicted RBP18.27■□□□□ 0.51
PNKP-224ENST00000631020 NDNQ99608 321 aa18.27■□□□□ 0.51
PNKP-224ENST00000631020 SPATS2LQ9NUQ6 558 aaKnown RBP18.27■□□□□ 0.51
PNKP-224ENST00000631020 NSMCE4AQ9NXX6 385 aa18.27■□□□□ 0.51
PNKP-224ENST00000631020 GNPTGQ9UJJ9 305 aa18.27■□□□□ 0.51
PNKP-224ENST00000631020 QSOX1O00391 747 aa18.26■□□□□ 0.51
PNKP-224ENST00000631020 CSO75390 466 aaKnown RBP18.26■□□□□ 0.51
PNKP-224ENST00000631020 DXOO77932 396 aaKnown RBP18.26■□□□□ 0.51
PNKP-224ENST00000631020 CCR7P32248 378 aa18.26■□□□□ 0.51
PNKP-224ENST00000631020 HSD17B3P37058 310 aa18.26■□□□□ 0.51
PNKP-224ENST00000631020 ILF3Q12906 894 aaKnown RBP eCLIP18.26■□□□□ 0.51
PNKP-224ENST00000631020 NFE2L1Q14494 772 aa18.26■□□□□ 0.51
PNKP-224ENST00000631020 ISXQ2M1V0 245 aa18.26■□□□□ 0.51
PNKP-224ENST00000631020 RBM20Q5T481 1227 aaKnown RBP18.26■□□□□ 0.51
PNKP-224ENST00000631020 SLC30A9Q6PML9 568 aa18.26■□□□□ 0.51
PNKP-224ENST00000631020 IGF2-ASQ6U949 168 aa18.26■□□□□ 0.51
PNKP-224ENST00000631020 TAF8Q7Z7C8 310 aa18.26■□□□□ 0.51
PNKP-224ENST00000631020 FGF11Q92914 225 aa18.26■□□□□ 0.51
PNKP-224ENST00000631020 FAM136AQ96C01 138 aa18.26■□□□□ 0.51
PNKP-224ENST00000631020 MRRFQ96E11 262 aaKnown RBP18.26■□□□□ 0.51
PNKP-224ENST00000631020 CPNE1Q99829 537 aa18.26■□□□□ 0.51
PNKP-224ENST00000631020 AARSD1Q9BTE6 412 aaKnown RBP18.26■□□□□ 0.51
PNKP-224ENST00000631020 GSDMCQ9BYG8 508 aa18.26■□□□□ 0.51
PNKP-224ENST00000631020 FAM8A1Q9UBU6 413 aa18.26■□□□□ 0.51
PNKP-224ENST00000631020 C17orf113A0A1B0GUU1 675 aa18.25■□□□□ 0.51
PNKP-224ENST00000631020 BRINP1O60477 761 aa18.25■□□□□ 0.51
PNKP-224ENST00000631020 EML2O95834 649 aa18.25■□□□□ 0.51
PNKP-224ENST00000631020 FTH1P02794 183 aa18.25■□□□□ 0.51
PNKP-224ENST00000631020 GP5P40197 560 aa18.25■□□□□ 0.51
PNKP-224ENST00000631020 EIF2S3P41091 472 aaKnown RBP18.25■□□□□ 0.51
PNKP-224ENST00000631020 ACTR1BP42025 376 aa18.25■□□□□ 0.51
PNKP-224ENST00000631020 LSSP48449 732 aa18.25■□□□□ 0.51
PNKP-224ENST00000631020 CLCNKAP51800 687 aa18.25■□□□□ 0.51
PNKP-224ENST00000631020 ACTR1AP61163 376 aa18.25■□□□□ 0.51
PNKP-224ENST00000631020 DMPKQ09013 629 aa18.25■□□□□ 0.51
PNKP-224ENST00000631020 TBC1D25Q3MII6 688 aa18.25■□□□□ 0.51
PNKP-224ENST00000631020 RBM44Q6ZP01 1051 aaKnown RBP18.25■□□□□ 0.51
PNKP-224ENST00000631020 SFTPA2Q8IWL1 248 aa18.25■□□□□ 0.51
PNKP-224ENST00000631020 CFAP206Q8IYR0 622 aa18.25■□□□□ 0.51
PNKP-224ENST00000631020 ATXN7L3BQ96GX2 97 aa18.25■□□□□ 0.51
PNKP-224ENST00000631020 RHOJQ9H4E5 214 aa18.25■□□□□ 0.51
PNKP-224ENST00000631020 TAAR2Q9P1P5 351 aa18.25■□□□□ 0.51
PNKP-224ENST00000631020 TBC1D29Q9UFV1 150 aa18.25■□□□□ 0.51
PNKP-224ENST00000631020 KCNJ13O60928 360 aa18.24■□□□□ 0.51
PNKP-224ENST00000631020 SHBGP04278 402 aa18.24■□□□□ 0.51
PNKP-224ENST00000631020 PGGT1BP53609 377 aa18.24■□□□□ 0.51
PNKP-224ENST00000631020 CDKN2DP55273 166 aa18.24■□□□□ 0.51
PNKP-224ENST00000631020 NAB1Q13506 487 aa18.24■□□□□ 0.51
PNKP-224ENST00000631020 COL28A1Q2UY09 1125 aa18.24■□□□□ 0.51
PNKP-224ENST00000631020 PERM1Q5SV97 790 aa18.24■□□□□ 0.51
PNKP-224ENST00000631020 METRNLQ641Q3 311 aa18.24■□□□□ 0.51
PNKP-224ENST00000631020 OGFOD3Q6PK18 319 aa18.24■□□□□ 0.51
PNKP-224ENST00000631020 KYQ8NBH2 561 aa18.24■□□□□ 0.51
PNKP-224ENST00000631020 GPR156Q8NFN8 814 aa18.24■□□□□ 0.51
PNKP-224ENST00000631020 ZNF578Q96N58 590 aaPredicted RBP18.24■□□□□ 0.51
PNKP-224ENST00000631020 RBBP8Q99708 897 aa18.24■□□□□ 0.51
PNKP-224ENST00000631020 SLC30A3Q99726 388 aa18.24■□□□□ 0.51
PNKP-224ENST00000631020 CCDC3Q9BQI4 270 aa18.24■□□□□ 0.51
PNKP-224ENST00000631020 POLR1BQ9H9Y6 1135 aa18.24■□□□□ 0.51
PNKP-224ENST00000631020 MTO1Q9Y2Z2 717 aaKnown RBP18.24■□□□□ 0.51
PNKP-224ENST00000631020 ARHGEF17Q96PE2 2063 aaPredicted RBP18.24■□□□□ 0.51
PNKP-224ENST00000631020 A6NCN8 305 aa18.23■□□□□ 0.51
PNKP-224ENST00000631020 H3BMM5 538 aa18.23■□□□□ 0.51
PNKP-224ENST00000631020 NTN3O00634 580 aaPredicted RBP18.23■□□□□ 0.51
PNKP-224ENST00000631020 RRP8O43159 456 aaKnown RBP18.23■□□□□ 0.51
PNKP-224ENST00000631020 TLX3O43711 291 aaPredicted RBP18.23■□□□□ 0.51
PNKP-224ENST00000631020 H2AFXP16104 143 aaPredicted RBP18.23■□□□□ 0.51
PNKP-224ENST00000631020 CHRM3P20309 590 aa18.23■□□□□ 0.51
PNKP-224ENST00000631020 AOAHP28039 575 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms