RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 TFB2MQ9H5Q4 396 aaKnown RBP9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 DNAAF2Q9NVR5 837 aaKnown RBP9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 FADS3Q9Y5Q0 445 aa9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 ZFC3H1O60293 1989 aaKnown RBP9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 PI4KAP42356 2102 aa9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 CEP192Q8TEP8 1941 aa9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 TMEM114B3SHH9 223 aa9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 CFAP99D6REC4 459 aa9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 MMP20O60882 483 aa9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 NDUFS2O75306 463 aa9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 RECQL5O94762 991 aaPredicted RBP9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 SLC25A14O95258 325 aaPredicted RBP9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 OR56A5P0C7T3 313 aa9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 GABRG2P18507 467 aa9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 ITGB6P18564 788 aa9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 SPINK2P20155 84 aa9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 C5AR1P21730 350 aa9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 AKT1P31749 480 aa9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 HK3P52790 923 aa9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 DNAJB13P59910 316 aa9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 RPS14P62263 151 aaKnown RBP9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 IFT88Q13099 833 aa9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 FAM219BQ5XKK7 198 aa9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 MINDY1Q8N5J2 469 aa9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 ZNF781Q8N8C0 355 aa9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 DDHD1Q8NEL9 900 aa9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 STAG3L4Q8TBR4 150 aa9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 CXorf40AQ8TE69 158 aa9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 CCT6BQ92526 530 aa9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 LINGO1Q96FE5 620 aa9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 DCUN1D1Q96GG9 259 aa9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 PDLIM5Q96HC4 596 aaKnown RBP9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 VPS35Q96QK1 796 aa9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 PANX3Q96QZ0 392 aa9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 DRC3Q9H069 523 aa9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 FBRSQ9HAH7 460 aa9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 CYP4F12Q9HCS2 524 aa9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 LATS2Q9NRM7 1088 aa9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 MARCOQ9UEW3 520 aaPredicted RBP9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 HAO1Q9UJM8 370 aa9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 DCTN4Q9UJW0 460 aa9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 ASCC3Q8N3C0 2202 aaKnown RBP9.34□□□□□ -0.91
PDLIM5-223ENST00000627587 IGHV1OR15-9A0A0B4J2B8 117 aa9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 CCDC189A1A4V9 331 aa9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 NPEPPSL1A6NEC2 478 aa9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 LRRC14BA6NHZ5 514 aa9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 UBXN8O00124 270 aa9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 HYAL3O43820 417 aaPredicted RBP9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 LZTS3O60299 673 aaPredicted RBP9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 KERAO60938 352 aa9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 SMIM24O75264 130 aa9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 IPO13O94829 963 aaKnown RBP9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 HSPA4LO95757 839 aa9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 TPBGLP0DKB5 382 aa9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 MSH3P20585 1137 aa9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 CCR7P32248 378 aa9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 RGS4P49798 205 aa9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 NFKB2Q00653 900 aa9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 GBX1Q14549 363 aa9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 TTLL9Q3SXZ7 439 aa9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 ACSBG2Q5FVE4 666 aa9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 ARL13AQ5H913 290 aaPredicted RBP9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 ZNF776Q68DI1 518 aaPredicted RBP9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 SBSNQ6UWP8 590 aa9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 PIWIL4Q7Z3Z4 852 aaKnown RBP9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 SLC22A9Q8IVM8 553 aa9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 FITM2Q8N6M3 262 aa9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 FRMD1Q8N878 549 aa9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 OR2T3Q8NH03 318 aa9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 BTN2A2Q8WVV5 523 aa9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 INPP5DQ92835 1189 aa9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 NUS1Q96E22 293 aa9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 HS3ST6Q96QI5 342 aa9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 TNFRSF12AQ9NP84 129 aa9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 SPATS2LQ9NUQ6 558 aaKnown RBP9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 PNPOQ9NVS9 261 aa9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 NCKIPSDQ9NZQ3 722 aa9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 DNAJC16Q9Y2G8 782 aa9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 USH1CQ9Y6N9 552 aa9.33□□□□□ -0.92
PDLIM5-223ENST00000627587 A0A0G2JND7 137 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 SPAARA0A1B0GVQ0 90 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 SYCE1LA8MT33 242 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 QSOX1O00391 747 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 BTN3A1O00481 513 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 AP1G1O43747 822 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 KLK8O60259 260 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 MAGEC1O60732 1142 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 KITP10721 976 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 CD59P13987 128 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 ATP1B2P14415 290 aaPredicted RBP9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 ALOX15P16050 662 aaPredicted RBP9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 DGKAP23743 735 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 OXTRP30559 389 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 DPTQ07507 201 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 TUBB3Q13509 450 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 RCN2Q14257 317 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 PPP1R3AQ16821 1122 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 CFAP157Q5JU67 520 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 LDLRAP1Q5SW96 308 aa9.32□□□□□ -0.92
PDLIM5-223ENST00000627587 XKR5Q6UX68 686 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms