RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 PLD5Q8N7P1 536 aa14.26□□□□□ -0.13
PNKP-218ENST00000625299 BLOC1S5Q8TDH9 187 aa14.26□□□□□ -0.13
PNKP-218ENST00000625299 RMDN2Q96LZ7 410 aa14.26□□□□□ -0.13
PNKP-218ENST00000625299 RNF157Q96PX1 679 aa14.26□□□□□ -0.13
PNKP-218ENST00000625299 DEF6Q9H4E7 631 aa14.26□□□□□ -0.13
PNKP-218ENST00000625299 ZNF552Q9H707 407 aaPredicted RBP14.26□□□□□ -0.13
PNKP-218ENST00000625299 GLOD4Q9HC38 313 aa14.26□□□□□ -0.13
PNKP-218ENST00000625299 C1GALT1Q9NS00 363 aa14.26□□□□□ -0.13
PNKP-218ENST00000625299 LMBRD1Q9NUN5 540 aa14.26□□□□□ -0.13
PNKP-218ENST00000625299 TMEM63CQ9P1W3 806 aa14.26□□□□□ -0.13
PNKP-218ENST00000625299 CTTNBP2NLQ9P2B4 639 aa14.26□□□□□ -0.13
PNKP-218ENST00000625299 GPN3Q9UHW5 284 aaPredicted RBP14.26□□□□□ -0.13
PNKP-218ENST00000625299 SERTAD3Q9UJW9 196 aa14.26□□□□□ -0.13
PNKP-218ENST00000625299 OSGIN2Q9Y236 505 aa14.26□□□□□ -0.13
PNKP-218ENST00000625299 PTRH2Q9Y3E5 179 aaKnown RBP14.26□□□□□ -0.13
PNKP-218ENST00000625299 PCDHGA10Q9Y5H3 936 aa14.26□□□□□ -0.13
PNKP-218ENST00000625299 DNMT3AQ9Y6K1 912 aaPredicted RBP14.26□□□□□ -0.13
PNKP-218ENST00000625299 COLEC10Q9Y6Z7 277 aa14.26□□□□□ -0.13
PNKP-218ENST00000625299 POLEQ07864 2286 aa14.26□□□□□ -0.13
PNKP-218ENST00000625299 FER1L5A0AVI2 2057 aa14.26□□□□□ -0.13
PNKP-218ENST00000625299 A0A0A6YYK5 440 aaPredicted RBP14.25□□□□□ -0.13
PNKP-218ENST00000625299 LRRD1A4D1F6 860 aa14.25□□□□□ -0.13
PNKP-218ENST00000625299 MGAT4DA6NG13 374 aa14.25□□□□□ -0.13
PNKP-218ENST00000625299 APOL1O14791 398 aa14.25□□□□□ -0.13
PNKP-218ENST00000625299 PPP1R12AO14974 1030 aaPredicted RBP14.25□□□□□ -0.13
PNKP-218ENST00000625299 PROSCO94903 275 aa14.25□□□□□ -0.13
PNKP-218ENST00000625299 PVRP15151 417 aa14.25□□□□□ -0.13
PNKP-218ENST00000625299 FOLR3P41439 243 aa14.25□□□□□ -0.13
PNKP-218ENST00000625299 TNNT3P45378 269 aaPredicted RBP14.25□□□□□ -0.13
PNKP-218ENST00000625299 RIPPLY3P57055 190 aa14.25□□□□□ -0.13
PNKP-218ENST00000625299 ITGA9Q13797 1035 aa14.25□□□□□ -0.13
PNKP-218ENST00000625299 SLC9A5Q14940 896 aa14.25□□□□□ -0.13
PNKP-218ENST00000625299 PDK1Q15118 436 aa14.25□□□□□ -0.13
PNKP-218ENST00000625299 ZDHHC20Q5W0Z9 365 aa14.25□□□□□ -0.13
PNKP-218ENST00000625299 SPOCD1Q6ZMY3 1216 aa14.25□□□□□ -0.13
PNKP-218ENST00000625299 ST6GALNAC3Q8NDV1 305 aa14.25□□□□□ -0.13
PNKP-218ENST00000625299 ZFPM2Q8WW38 1151 aa14.25□□□□□ -0.13
PNKP-218ENST00000625299 LCN9Q8WX39 176 aa14.25□□□□□ -0.13
PNKP-218ENST00000625299 N4BP2L2Q92802 583 aaPredicted RBP14.25□□□□□ -0.13
PNKP-218ENST00000625299 TADA1Q96BN2 335 aa14.25□□□□□ -0.13
PNKP-218ENST00000625299 IP6K3Q96PC2 410 aa14.25□□□□□ -0.13
PNKP-218ENST00000625299 DPH2Q9BQC3 489 aaPredicted RBP14.25□□□□□ -0.13
PNKP-218ENST00000625299 DHRS4Q9BTZ2 278 aa14.25□□□□□ -0.13
PNKP-218ENST00000625299 SRMSQ9H3Y6 488 aa14.25□□□□□ -0.13
PNKP-218ENST00000625299 ZBTB20Q9HC78 741 aaPredicted RBP14.25□□□□□ -0.13
PNKP-218ENST00000625299 SYTL2Q9HCH5 934 aa14.25□□□□□ -0.13
PNKP-218ENST00000625299 ACSL5Q9ULC5 683 aa14.25□□□□□ -0.13
PNKP-218ENST00000625299 SVILO95425 2214 aa14.25□□□□□ -0.13
PNKP-218ENST00000625299 FBN2P35556 2912 aa14.25□□□□□ -0.13
PNKP-218ENST00000625299 OTOGQ6ZRI0 2925 aa14.25□□□□□ -0.13
PNKP-218ENST00000625299 A0A087X0T9 212 aa14.24□□□□□ -0.13
PNKP-218ENST00000625299 PRSS44E7EML9 344 aa14.24□□□□□ -0.13
PNKP-218ENST00000625299 MATN2O00339 956 aa14.24□□□□□ -0.13
PNKP-218ENST00000625299 KLHL41O60662 606 aa14.24□□□□□ -0.13
PNKP-218ENST00000625299 KLF7O75840 302 aaPredicted RBP14.24□□□□□ -0.13
PNKP-218ENST00000625299 IPO13O94829 963 aaKnown RBP14.24□□□□□ -0.13
PNKP-218ENST00000625299 FAM228BP0C875 321 aa14.24□□□□□ -0.13
PNKP-218ENST00000625299 CBSLP0DN79 551 aa14.24□□□□□ -0.13
PNKP-218ENST00000625299 NDUFS1P28331 727 aa14.24□□□□□ -0.13
PNKP-218ENST00000625299 CBSP35520 551 aa14.24□□□□□ -0.13
PNKP-218ENST00000625299 CHRNA4P43681 627 aa14.24□□□□□ -0.13
PNKP-218ENST00000625299 FOXL2P58012 376 aa14.24□□□□□ -0.13
PNKP-218ENST00000625299 DYNLT1P63172 113 aa14.24□□□□□ -0.13
PNKP-218ENST00000625299 SSPNQ14714 243 aa14.24□□□□□ -0.13
PNKP-218ENST00000625299 SLC14A2Q15849 920 aa14.24□□□□□ -0.13
PNKP-218ENST00000625299 ANO6Q4KMQ2 910 aa14.24□□□□□ -0.13
PNKP-218ENST00000625299 SIRPB2Q5JXA9 342 aa14.24□□□□□ -0.13
PNKP-218ENST00000625299 IGFL3Q6UXB1 125 aa14.24□□□□□ -0.13
PNKP-218ENST00000625299 Q6ZS92 163 aa14.24□□□□□ -0.13
PNKP-218ENST00000625299 DAAM2Q86T65 1068 aa14.24□□□□□ -0.13
PNKP-218ENST00000625299 CFAP206Q8IYR0 622 aa14.24□□□□□ -0.13
PNKP-218ENST00000625299 GPR135Q8IZ08 494 aa14.24□□□□□ -0.13
PNKP-218ENST00000625299 LILRA3Q8N6C8 439 aaPredicted RBP14.24□□□□□ -0.13
PNKP-218ENST00000625299 OR2L2Q8NH16 312 aa14.24□□□□□ -0.13
PNKP-218ENST00000625299 NRTNQ99748 197 aa14.24□□□□□ -0.13
PNKP-218ENST00000625299 MAK16Q9BXY0 300 aaKnown RBP14.24□□□□□ -0.13
PNKP-218ENST00000625299 TRABDQ9H4I3 376 aa14.24□□□□□ -0.13
PNKP-218ENST00000625299 P4HTMQ9NXG6 502 aa14.24□□□□□ -0.13
PNKP-218ENST00000625299 IL17CQ9P0M4 197 aa14.24□□□□□ -0.13
PNKP-218ENST00000625299 NDOR1Q9UHB4 597 aa14.24□□□□□ -0.13
PNKP-218ENST00000625299 ENTPD4Q9Y227 616 aa14.24□□□□□ -0.13
PNKP-218ENST00000625299 PKP3Q9Y446 797 aa14.24□□□□□ -0.13
PNKP-218ENST00000625299 CSAG2Q9Y5P2 127 aa14.24□□□□□ -0.13
PNKP-218ENST00000625299 ZGRF1Q86YA3 2104 aa14.23□□□□□ -0.13
PNKP-218ENST00000625299 POLQO75417 2590 aa14.23□□□□□ -0.13
PNKP-218ENST00000625299 APCP25054 2843 aa14.23□□□□□ -0.13
PNKP-218ENST00000625299 BTN3A3O00478 584 aa14.23□□□□□ -0.13
PNKP-218ENST00000625299 BTN3A1O00481 513 aa14.23□□□□□ -0.13
PNKP-218ENST00000625299 ZG16O60844 167 aa14.23□□□□□ -0.13
PNKP-218ENST00000625299 HBQ1P09105 142 aa14.23□□□□□ -0.13
PNKP-218ENST00000625299 ITGA3P26006 1051 aa14.23□□□□□ -0.13
PNKP-218ENST00000625299 GRNP28799 593 aaKnown RBP14.23□□□□□ -0.13
PNKP-218ENST00000625299 PRDX3P30048 256 aaKnown RBP14.23□□□□□ -0.13
PNKP-218ENST00000625299 HADHAP40939 763 aa14.23□□□□□ -0.13
PNKP-218ENST00000625299 WNT3AP56704 352 aa14.23□□□□□ -0.13
PNKP-218ENST00000625299 ZRSR2Q15696 482 aaKnown RBP14.23□□□□□ -0.13
PNKP-218ENST00000625299 HIF1AQ16665 826 aa14.23□□□□□ -0.13
PNKP-218ENST00000625299 CYP2A13Q16696 494 aa14.23□□□□□ -0.13
PNKP-218ENST00000625299 DEFB110Q30KQ9 67 aa14.23□□□□□ -0.13
PNKP-218ENST00000625299 CRB2Q5IJ48 1285 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms