RNA–Protein interactions for RNA: ENST00000625286.1

DDX41-218, Transcript of DEAD-box helicase 41, humanhuman

TSL 5 BASIC

Gene DDX41, Length 150 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-218ENST00000625286 IFNKQ9P0W0 207 aa10.74□□□□□ -0.69
DDX41-218ENST00000625286 FAM8A1Q9UBU6 413 aa10.74□□□□□ -0.69
DDX41-218ENST00000625286 ERRFI1Q9UJM3 462 aaPredicted RBP10.74□□□□□ -0.69
DDX41-218ENST00000625286 POMT2Q9UKY4 750 aa10.74□□□□□ -0.69
DDX41-218ENST00000625286 ARL5AQ9Y689 179 aa10.74□□□□□ -0.69
DDX41-218ENST00000625286 DOCK10Q96BY6 2186 aa10.74□□□□□ -0.69
DDX41-218ENST00000625286 DIDO1Q9BTC0 2240 aaKnown RBP10.74□□□□□ -0.69
DDX41-218ENST00000625286 SSU72P8A0A1W2PR75 194 aa10.73□□□□□ -0.69
DDX41-218ENST00000625286 H3BMH7 237 aa10.73□□□□□ -0.69
DDX41-218ENST00000625286 CST8O60676 142 aa10.73□□□□□ -0.69
DDX41-218ENST00000625286 KLF7O75840 302 aaPredicted RBP10.73□□□□□ -0.69
DDX41-218ENST00000625286 CBX6O95503 412 aa10.73□□□□□ -0.69
DDX41-218ENST00000625286 LDLRP01130 860 aa10.73□□□□□ -0.69
DDX41-218ENST00000625286 PVRP15151 417 aa10.73□□□□□ -0.69
DDX41-218ENST00000625286 ZFXP17010 805 aaPredicted RBP10.73□□□□□ -0.69
DDX41-218ENST00000625286 PRDX3P30048 256 aaKnown RBP10.73□□□□□ -0.69
DDX41-218ENST00000625286 DCTP40126 519 aa10.73□□□□□ -0.69
DDX41-218ENST00000625286 ARHGAP25P42331 645 aa10.73□□□□□ -0.69
DDX41-218ENST00000625286 PDE1BQ01064 536 aa10.73□□□□□ -0.69
DDX41-218ENST00000625286 CRB2Q5IJ48 1285 aa10.73□□□□□ -0.69
DDX41-218ENST00000625286 CYB5D1Q6P9G0 228 aa10.73□□□□□ -0.69
DDX41-218ENST00000625286 SPOCD1Q6ZMY3 1216 aa10.73□□□□□ -0.69
DDX41-218ENST00000625286 PID1Q7Z2X4 250 aa10.73□□□□□ -0.69
DDX41-218ENST00000625286 GLT6D1Q7Z4J2 308 aa10.73□□□□□ -0.69
DDX41-218ENST00000625286 ZC3H18Q86VM9 953 aaKnown RBP10.73□□□□□ -0.69
DDX41-218ENST00000625286 OOSP2Q86WS3 158 aa10.73□□□□□ -0.69
DDX41-218ENST00000625286 CFAP206Q8IYR0 622 aa10.73□□□□□ -0.69
DDX41-218ENST00000625286 PHC3Q8NDX5 983 aa10.73□□□□□ -0.69
DDX41-218ENST00000625286 IPMKQ8NFU5 416 aa10.73□□□□□ -0.69
DDX41-218ENST00000625286 OR8K5Q8NH50 307 aa10.73□□□□□ -0.69
DDX41-218ENST00000625286 TFB1MQ8WVM0 346 aaKnown RBP10.73□□□□□ -0.69
DDX41-218ENST00000625286 ZFPM2Q8WW38 1151 aa10.73□□□□□ -0.69
DDX41-218ENST00000625286 INPP5DQ92835 1189 aa10.73□□□□□ -0.69
DDX41-218ENST00000625286 SNRNP40Q96DI7 357 aaKnown RBP10.73□□□□□ -0.69
DDX41-218ENST00000625286 LINC00615Q96LM1 132 aaPredicted RBP10.73□□□□□ -0.69
DDX41-218ENST00000625286 DNAJC7Q99615 494 aa10.73□□□□□ -0.69
DDX41-218ENST00000625286 GOLPH3Q9H4A6 298 aa10.73□□□□□ -0.69
DDX41-218ENST00000625286 SPTLC3Q9NUV7 552 aa10.73□□□□□ -0.69
DDX41-218ENST00000625286 CUEDC1Q9NWM3 386 aaPredicted RBP10.73□□□□□ -0.69
DDX41-218ENST00000625286 SNX7Q9UNH6 387 aa10.73□□□□□ -0.69
DDX41-218ENST00000625286 ZNF451Q9Y4E5 1061 aa10.73□□□□□ -0.69
DDX41-218ENST00000625286 SYCE3A1L190 88 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 AGAP14A8MT82 685 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 TMEM150CB9EJG8 249 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 BTN3A1O00481 513 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 CNOT3O75175 753 aaKnown RBP10.72□□□□□ -0.69
DDX41-218ENST00000625286 PRAMEF1O95521 474 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 KLK3P07288 261 aaPredicted RBP10.72□□□□□ -0.69
DDX41-218ENST00000625286 TPBGLP0DKB5 382 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 MSH3P20585 1137 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 COMTP21964 271 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 PDHA2P29803 388 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 ADRA1AP35348 466 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 NR2C2P49116 596 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 LMAN1P49257 510 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 CDKN1CP49918 316 aaPredicted RBP10.72□□□□□ -0.69
DDX41-218ENST00000625286 VAV2P52735 878 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 GSDMDP57764 484 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 ITGA9Q13797 1035 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 NR6A1Q15406 480 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 ZIC1Q15915 447 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 LONRF2Q1L5Z9 754 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 BCL7AQ4VC05 210 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 ZDHHC20Q5W0Z9 365 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 KAZNQ674X7 775 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 CDHR3Q6ZTQ4 885 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 SYTL1Q8IYJ3 562 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 CARFQ8N187 725 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 OR4K2Q8NGD2 314 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 CPT1BQ92523 772 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 PNPLA2Q96AD5 504 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 HAUS1Q96CS2 278 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 CLIP3Q96DZ5 547 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 TRAPPC9Q96Q05 1148 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 APOL2Q9BQE5 337 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 PITPNM3Q9BZ71 974 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 ZCCHC2Q9C0B9 1178 aaKnown RBP10.72□□□□□ -0.69
DDX41-218ENST00000625286 OR52A5Q9H2C5 316 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 FAM96AQ9H5X1 160 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 XKR8Q9H6D3 395 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 ZBTB20Q9HC78 741 aaPredicted RBP10.72□□□□□ -0.69
DDX41-218ENST00000625286 FAM60AQ9NP50 221 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 C1GALT1Q9NS00 363 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 ASF1BQ9NVP2 202 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 SOHLH2Q9NX45 425 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.72□□□□□ -0.69
DDX41-218ENST00000625286 HACD3Q9P035 362 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 LCMT1Q9UIC8 334 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 FKBPLQ9UIM3 349 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 ACSL5Q9ULC5 683 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 NTNG1Q9Y2I2 539 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 PCDHGB7Q9Y5F8 929 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 SVILO95425 2214 aa10.72□□□□□ -0.69
DDX41-218ENST00000625286 GOLGA6L22H0YM25 854 aa10.71□□□□□ -0.69
DDX41-218ENST00000625286 CCL22O00626 93 aa10.71□□□□□ -0.69
DDX41-218ENST00000625286 STX7O15400 261 aaKnown RBP10.71□□□□□ -0.69
DDX41-218ENST00000625286 ZNF749O43361 778 aa10.71□□□□□ -0.69
DDX41-218ENST00000625286 DPM1O60762 260 aa10.71□□□□□ -0.69
DDX41-218ENST00000625286 SRP72O76094 671 aaKnown RBP10.71□□□□□ -0.69
DDX41-218ENST00000625286 MSL3P1P0C860 447 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms