RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 TAOK1Q7L7X3 1001 aa13.45□□□□□ -0.26
SNX1-214ENST00000625244 TRAPPC5Q8IUR0 188 aa13.45□□□□□ -0.26
SNX1-214ENST00000625244 TEX26Q8N6G2 289 aa13.45□□□□□ -0.26
SNX1-214ENST00000625244 CHDHQ8NE62 594 aaPredicted RBP13.45□□□□□ -0.26
SNX1-214ENST00000625244 CCHCR1Q8TD31 782 aa13.45□□□□□ -0.26
SNX1-214ENST00000625244 EIF3CQ99613 913 aaKnown RBP13.45□□□□□ -0.26
SNX1-214ENST00000625244 FOXC2Q99958 501 aa13.45□□□□□ -0.26
SNX1-214ENST00000625244 NDC1Q9BTX1 674 aa13.45□□□□□ -0.26
SNX1-214ENST00000625244 NUP85Q9BW27 656 aa13.45□□□□□ -0.26
SNX1-214ENST00000625244 LHPPQ9H008 270 aa13.45□□□□□ -0.26
SNX1-214ENST00000625244 NAT10Q9H0A0 1025 aaKnown RBP13.45□□□□□ -0.26
SNX1-214ENST00000625244 C1GALT1Q9NS00 363 aa13.45□□□□□ -0.26
SNX1-214ENST00000625244 IMP3Q9NV31 184 aaKnown RBP13.45□□□□□ -0.26
SNX1-214ENST00000625244 IFT80Q9P2H3 777 aaPredicted RBP13.45□□□□□ -0.26
SNX1-214ENST00000625244 TNFRSF10DQ9UBN6 386 aa13.45□□□□□ -0.26
SNX1-214ENST00000625244 POMT2Q9UKY4 750 aa13.45□□□□□ -0.26
SNX1-214ENST00000625244 KIAA1324LA8MWY0 1029 aaPredicted RBP13.44□□□□□ -0.26
SNX1-214ENST00000625244 ESRRAP11474 423 aaPredicted RBP13.44□□□□□ -0.26
SNX1-214ENST00000625244 MTHFD1P11586 935 aaKnown RBP13.44□□□□□ -0.26
SNX1-214ENST00000625244 ST6GAL1P15907 406 aa13.44□□□□□ -0.26
SNX1-214ENST00000625244 VCLP18206 1134 aa13.44□□□□□ -0.26
SNX1-214ENST00000625244 CDH6P55285 790 aa13.44□□□□□ -0.26
SNX1-214ENST00000625244 MFAP5Q13361 173 aa13.44□□□□□ -0.26
SNX1-214ENST00000625244 NFKBIBQ15653 356 aa13.44□□□□□ -0.26
SNX1-214ENST00000625244 QPCTQ16769 361 aa13.44□□□□□ -0.26
SNX1-214ENST00000625244 CYP4V2Q6ZWL3 525 aaPredicted RBP13.44□□□□□ -0.26
SNX1-214ENST00000625244 PHF13Q86YI8 300 aaPredicted RBP13.44□□□□□ -0.26
SNX1-214ENST00000625244 ATPAF2Q8N5M1 289 aa13.44□□□□□ -0.26
SNX1-214ENST00000625244 TRAM1L1Q8N609 369 aa13.44□□□□□ -0.26
SNX1-214ENST00000625244 NSMCE1Q8WV22 266 aa13.44□□□□□ -0.26
SNX1-214ENST00000625244 ZSCAN5AQ9BUG6 496 aa13.44□□□□□ -0.26
SNX1-214ENST00000625244 STK33Q9BYT3 514 aa13.44□□□□□ -0.26
SNX1-214ENST00000625244 KLHL25Q9H0H3 589 aa13.44□□□□□ -0.26
SNX1-214ENST00000625244 PCDH9Q9HC56 1237 aa13.44□□□□□ -0.26
SNX1-214ENST00000625244 TMPRSS11EQ9UL52 423 aa13.44□□□□□ -0.26
SNX1-214ENST00000625244 ANKRD62A6NC57 917 aa13.43□□□□□ -0.26
SNX1-214ENST00000625244 SOCS6O14544 535 aa13.43□□□□□ -0.26
SNX1-214ENST00000625244 SLC19A2O60779 497 aa13.43□□□□□ -0.26
SNX1-214ENST00000625244 CALB1P05937 261 aa13.43□□□□□ -0.26
SNX1-214ENST00000625244 CD63P08962 238 aa13.43□□□□□ -0.26
SNX1-214ENST00000625244 AMPD1P23109 780 aa13.43□□□□□ -0.26
SNX1-214ENST00000625244 HCAR3P49019 387 aa13.43□□□□□ -0.26
SNX1-214ENST00000625244 CASP6P55212 293 aa13.43□□□□□ -0.26
SNX1-214ENST00000625244 DCDP81605 110 aaKnown RBP13.43□□□□□ -0.26
SNX1-214ENST00000625244 INAQ16352 499 aa13.43□□□□□ -0.26
SNX1-214ENST00000625244 CDHR3Q6ZTQ4 885 aa13.43□□□□□ -0.26
SNX1-214ENST00000625244 NCCRP1Q6ZVX7 275 aaPredicted RBP13.43□□□□□ -0.26
SNX1-214ENST00000625244 Q71RC1 249 aaPredicted RBP13.43□□□□□ -0.26
SNX1-214ENST00000625244 MON1BQ7L1V2 547 aa13.43□□□□□ -0.26
SNX1-214ENST00000625244 PRIMA1Q86XR5 153 aa13.43□□□□□ -0.26
SNX1-214ENST00000625244 THOC3Q96J01 351 aaKnown RBP13.43□□□□□ -0.26
SNX1-214ENST00000625244 LMF1Q96S06 567 aa13.43□□□□□ -0.26
SNX1-214ENST00000625244 INSM2Q96T92 566 aaPredicted RBP13.43□□□□□ -0.26
SNX1-214ENST00000625244 POLR1EQ9GZS1 481 aaKnown RBP13.43□□□□□ -0.26
SNX1-214ENST00000625244 PLA2G3Q9NZ20 509 aa13.43□□□□□ -0.26
SNX1-214ENST00000625244 ABI3Q9P2A4 366 aa13.43□□□□□ -0.26
SNX1-214ENST00000625244 SLC24A2Q9UI40 661 aa13.43□□□□□ -0.26
SNX1-214ENST00000625244 H3BMH7 237 aa13.42□□□□□ -0.26
SNX1-214ENST00000625244 PVRP15151 417 aa13.42□□□□□ -0.26
SNX1-214ENST00000625244 MMP11P24347 488 aa13.42□□□□□ -0.26
SNX1-214ENST00000625244 TNFSF10P50591 281 aa13.42□□□□□ -0.26
SNX1-214ENST00000625244 DCDC1P59894 354 aa13.42□□□□□ -0.26
SNX1-214ENST00000625244 RPL26P61254 145 aaKnown RBP13.42□□□□□ -0.26
SNX1-214ENST00000625244 ARG2P78540 354 aa13.42□□□□□ -0.26
SNX1-214ENST00000625244 RBPJQ06330 500 aa13.42□□□□□ -0.26
SNX1-214ENST00000625244 TYRO3Q06418 890 aa13.42□□□□□ -0.26
SNX1-214ENST00000625244 DMPKQ09013 629 aa13.42□□□□□ -0.26
SNX1-214ENST00000625244 TMEM115Q12893 351 aaPredicted RBP13.42□□□□□ -0.26
SNX1-214ENST00000625244 XRCC4Q13426 336 aa13.42□□□□□ -0.26
SNX1-214ENST00000625244 NFE2L1Q14494 772 aa13.42□□□□□ -0.26
SNX1-214ENST00000625244 CLEC16AQ2KHT3 1053 aa13.42□□□□□ -0.26
SNX1-214ENST00000625244 PDPK2PQ6A1A2 396 aa13.42□□□□□ -0.26
SNX1-214ENST00000625244 ALG1LQ6GMV1 187 aa13.42□□□□□ -0.26
SNX1-214ENST00000625244 RHBDD2Q6NTF9 364 aa13.42□□□□□ -0.26
SNX1-214ENST00000625244 DCUN1D2Q6PH85 259 aa13.42□□□□□ -0.26
SNX1-214ENST00000625244 KIRREL2Q6UWL6 708 aa13.42□□□□□ -0.26
SNX1-214ENST00000625244 AMZ2Q86W34 360 aa13.42□□□□□ -0.26
SNX1-214ENST00000625244 OR4E2Q8NGC2 313 aa13.42□□□□□ -0.26
SNX1-214ENST00000625244 ARRDC2Q8TBH0 407 aa13.42□□□□□ -0.26
SNX1-214ENST00000625244 SPRTNQ9H040 489 aaPredicted RBP13.42□□□□□ -0.26
SNX1-214ENST00000625244 NDST4Q9H3R1 872 aa13.42□□□□□ -0.26
SNX1-214ENST00000625244 SLC22A11Q9NSA0 550 aa13.42□□□□□ -0.26
SNX1-214ENST00000625244 CCM2LQ9NUG4 571 aaPredicted RBP13.42□□□□□ -0.26
SNX1-214ENST00000625244 DHCR7Q9UBM7 475 aaKnown RBP13.42□□□□□ -0.26
SNX1-214ENST00000625244 CDC23Q9UJX2 597 aa13.42□□□□□ -0.26
SNX1-214ENST00000625244 RPL26L1Q9UNX3 145 aaKnown RBP13.42□□□□□ -0.26
SNX1-214ENST00000625244 HS3ST3B1Q9Y662 390 aa13.42□□□□□ -0.26
SNX1-214ENST00000625244 ANKRD66B4E2M5 251 aa13.41□□□□□ -0.26
SNX1-214ENST00000625244 POP7O75817 140 aaKnown RBP13.41□□□□□ -0.26
SNX1-214ENST00000625244 CTSBP07858 339 aa13.41□□□□□ -0.26
SNX1-214ENST00000625244 FOSL1P15407 271 aa13.41□□□□□ -0.26
SNX1-214ENST00000625244 HLA-DPA1P20036 260 aa13.41□□□□□ -0.26
SNX1-214ENST00000625244 PRDX3P30048 256 aaKnown RBP13.41□□□□□ -0.26
SNX1-214ENST00000625244 NIPAL4Q0D2K0 466 aa13.41□□□□□ -0.26
SNX1-214ENST00000625244 PRKAA1Q13131 559 aa13.41□□□□□ -0.26
SNX1-214ENST00000625244 MAN2A1Q16706 1144 aa13.41□□□□□ -0.26
SNX1-214ENST00000625244 LONRF1Q17RB8 773 aa13.41□□□□□ -0.26
SNX1-214ENST00000625244 NKAIN1Q4KMZ8 207 aa13.41□□□□□ -0.26
SNX1-214ENST00000625244 VWA3BQ502W6 1294 aa13.41□□□□□ -0.26
SNX1-214ENST00000625244 TMCO3Q6UWJ1 677 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms