RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 ZFP36L2P47974 494 aaKnown RBP14.94□□□□□ -0.02
PMS1-221ENST00000624204 DGKEP52429 567 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 GEMP55040 296 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 BRMS1LQ5PSV4 323 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 UNC93AQ86WB7 457 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 CDYL2Q8N8U2 506 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 REPS2Q8NFH8 660 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 Q96MT0 163 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 NEDD4LQ96PU5 975 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 DUSP21Q9H596 190 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 TOR4AQ9NXH8 423 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 RNF112Q9ULX5 631 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 SPEF1Q9Y4P9 236 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 FAM234BA2RU67 622 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 LOC110117498-PIK3R3F6TDL0 507 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 PRSS56P0CW18 603 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 CD1DP15813 335 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 CYP2C18P33260 490 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 HTR2BP41595 481 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 BACE1P56817 501 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 TUBA3EQ6PEY2 450 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 CILP2Q8IUL8 1156 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 TCAIMQ8N3R3 496 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 TSPEARQ8WU66 669 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 PHOX2BQ99453 314 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 POLR3BQ9NW08 1133 aaPredicted RBP14.94□□□□□ -0.02
PMS1-221ENST00000624204 VAPAQ9P0L0 249 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 TMEFF2Q9UIK5 374 aaPredicted RBP14.94□□□□□ -0.02
PMS1-221ENST00000624204 LOC105371267A0A1B0GV96 52 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 TEX28O15482 410 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 VPS4BO75351 444 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 SLC15A1P46059 708 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 GPLD1P80108 840 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 ZNF45Q02386 682 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 ANKS6Q68DC2 871 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 DLEU7Q6UYE1 221 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 ZNF517Q6ZMY9 492 aaPredicted RBP14.94□□□□□ -0.02
PMS1-221ENST00000624204 FAM83AQ86UY5 434 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 NATD1Q8N6N6 113 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 SPERTQ8NA61 448 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 OR2T11Q8NH01 316 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 SPATA33Q96N06 139 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 ZNF583Q96ND8 569 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 BARD1Q99728 777 aaKnown RBP14.94□□□□□ -0.02
PMS1-221ENST00000624204 KCNS3Q9BQ31 491 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 STMN3Q9NZ72 180 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 RNF6Q9Y252 685 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 PKP3Q9Y446 797 aa14.94□□□□□ -0.02
PMS1-221ENST00000624204 ARVCFO00192 962 aa14.93□□□□□ -0.02
PMS1-221ENST00000624204 CHRM5P08912 532 aaPredicted RBP14.93□□□□□ -0.02
PMS1-221ENST00000624204 USP17L7P0C7H9 530 aa14.93□□□□□ -0.02
PMS1-221ENST00000624204 AGTR2P50052 363 aa14.93□□□□□ -0.02
PMS1-221ENST00000624204 ARSDP51689 593 aa14.93□□□□□ -0.02
PMS1-221ENST00000624204 CYP20A1Q6UW02 462 aa14.93□□□□□ -0.02
PMS1-221ENST00000624204 GCNT7Q6ZNI0 430 aa14.93□□□□□ -0.02
PMS1-221ENST00000624204 FAM20CQ8IXL6 584 aa14.93□□□□□ -0.02
PMS1-221ENST00000624204 UBASH3BQ8TF42 649 aa14.93□□□□□ -0.02
PMS1-221ENST00000624204 SLC38A4Q969I6 547 aa14.93□□□□□ -0.02
PMS1-221ENST00000624204 TMEM209Q96SK2 561 aa14.93□□□□□ -0.02
PMS1-221ENST00000624204 CHCHD6Q9BRQ6 235 aa14.93□□□□□ -0.02
PMS1-221ENST00000624204 ITPAQ9BY32 194 aa14.93□□□□□ -0.02
PMS1-221ENST00000624204 PRKD2Q9BZL6 878 aa14.93□□□□□ -0.02
PMS1-221ENST00000624204 EVPLQ92817 2033 aa14.93□□□□□ -0.02
PMS1-221ENST00000624204 SMIM30A4D0T7 59 aa14.93□□□□□ -0.02
PMS1-221ENST00000624204 ERVH48-1M5A8F1 160 aa14.93□□□□□ -0.02
PMS1-221ENST00000624204 CPNE3O75131 537 aaKnown RBP14.93□□□□□ -0.02
PMS1-221ENST00000624204 ARIH2O95376 493 aa14.93□□□□□ -0.02
PMS1-221ENST00000624204 ZNF682O95780 498 aa14.93□□□□□ -0.02
PMS1-221ENST00000624204 MTHFD2P13995 350 aa14.93□□□□□ -0.02
PMS1-221ENST00000624204 EPHA2P29317 976 aa14.93□□□□□ -0.02
PMS1-221ENST00000624204 TGFBR2P37173 567 aa14.93□□□□□ -0.02
PMS1-221ENST00000624204 WNT3AP56704 352 aa14.93□□□□□ -0.02
PMS1-221ENST00000624204 TYSND1Q2T9J0 566 aa14.93□□□□□ -0.02
PMS1-221ENST00000624204 ARMC4Q5T2S8 1044 aa14.93□□□□□ -0.02
PMS1-221ENST00000624204 FAAH2Q6GMR7 532 aa14.93□□□□□ -0.02
PMS1-221ENST00000624204 ZNF717Q9BY31 904 aaPredicted RBP14.93□□□□□ -0.02
PMS1-221ENST00000624204 RUBCNLQ9H714 662 aa14.93□□□□□ -0.02
PMS1-221ENST00000624204 FBXW11Q9UKB1 542 aa14.93□□□□□ -0.02
PMS1-221ENST00000624204 HLA-DQB2P05538 268 aa14.92□□□□□ -0.02
PMS1-221ENST00000624204 HOXD8P13378 290 aaPredicted RBP14.92□□□□□ -0.02
PMS1-221ENST00000624204 BMP1P13497 986 aa14.92□□□□□ -0.02
PMS1-221ENST00000624204 PTPRAP18433 802 aa14.92□□□□□ -0.02
PMS1-221ENST00000624204 ACVR2AP27037 513 aa14.92□□□□□ -0.02
PMS1-221ENST00000624204 ERVK-8P63133 956 aa14.92□□□□□ -0.02
PMS1-221ENST00000624204 TUBA1BP68363 451 aa14.92□□□□□ -0.02
PMS1-221ENST00000624204 LRRC26Q2I0M4 334 aa14.92□□□□□ -0.02
PMS1-221ENST00000624204 ZNF484Q5JVG2 852 aa14.92□□□□□ -0.02
PMS1-221ENST00000624204 PRSS36Q5K4E3 855 aa14.92□□□□□ -0.02
PMS1-221ENST00000624204 SMYD5Q6GMV2 418 aa14.92□□□□□ -0.02
PMS1-221ENST00000624204 TUBA1AQ71U36 451 aa14.92□□□□□ -0.02
PMS1-221ENST00000624204 ZNF438Q7Z4V0 828 aa14.92□□□□□ -0.02
PMS1-221ENST00000624204 CYP4Z1Q86W10 505 aa14.92□□□□□ -0.02
PMS1-221ENST00000624204 UBQLNLQ8IYU4 475 aa14.92□□□□□ -0.02
PMS1-221ENST00000624204 PHACTR4Q8IZ21 702 aa14.92□□□□□ -0.02
PMS1-221ENST00000624204 NLGN1Q8N2Q7 840 aa14.92□□□□□ -0.02
PMS1-221ENST00000624204 TP53I13Q8NBR0 393 aaPredicted RBP14.92□□□□□ -0.02
PMS1-221ENST00000624204 ST6GAL2Q96JF0 529 aa14.92□□□□□ -0.02
PMS1-221ENST00000624204 FCRL5Q96RD9 977 aa14.92□□□□□ -0.02
PMS1-221ENST00000624204 COLEC11Q9BWP8 271 aa14.92□□□□□ -0.02
PMS1-221ENST00000624204 CDADC1Q9BWV3 514 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms