RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 KLC4Q9NSK0 619 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 IKZF3Q9UKT9 509 aa17.47■□□□□ 0.39
PTCHD3-202ENST00000622555 KLHL33A6NCF5 533 aa17.46■□□□□ 0.39
PTCHD3-202ENST00000622555 BCAT2O15382 392 aaPredicted RBP17.46■□□□□ 0.39
PTCHD3-202ENST00000622555 OVGP1Q12889 678 aa17.46■□□□□ 0.39
PTCHD3-202ENST00000622555 FZD2Q14332 565 aa17.46■□□□□ 0.39
PTCHD3-202ENST00000622555 OR4D1Q15615 310 aa17.46■□□□□ 0.39
PTCHD3-202ENST00000622555 TSNQ15631 228 aaKnown RBP17.46■□□□□ 0.39
PTCHD3-202ENST00000622555 TTC19Q6DKK2 380 aaPredicted RBP17.46■□□□□ 0.39
PTCHD3-202ENST00000622555 CYHR1Q6ZMK1 362 aa17.46■□□□□ 0.39
PTCHD3-202ENST00000622555 TAX1BP1Q86VP1 789 aa17.46■□□□□ 0.39
PTCHD3-202ENST00000622555 KIAA1191Q96A73 305 aa17.46■□□□□ 0.39
PTCHD3-202ENST00000622555 EPN3Q9H201 632 aa17.46■□□□□ 0.39
PTCHD3-202ENST00000622555 PNMA8BQ9ULN7 279 aaPredicted RBP17.46■□□□□ 0.39
PTCHD3-202ENST00000622555 KCNK6Q9Y257 313 aa17.46■□□□□ 0.39
PTCHD3-202ENST00000622555 ATXN2Q99700 1313 aaKnown RBP17.45■□□□□ 0.38
PTCHD3-202ENST00000622555 H3BM21 787 aa17.45■□□□□ 0.38
PTCHD3-202ENST00000622555 TLR4O00206 839 aa17.45■□□□□ 0.38
PTCHD3-202ENST00000622555 RASGRP1O95267 797 aa17.45■□□□□ 0.38
PTCHD3-202ENST00000622555 MPC1LP0DKB6 136 aa17.45■□□□□ 0.38
PTCHD3-202ENST00000622555 PDHA2P29803 388 aa17.45■□□□□ 0.38
PTCHD3-202ENST00000622555 CNR2P34972 360 aa17.45■□□□□ 0.38
PTCHD3-202ENST00000622555 PLOD1Q02809 727 aaPredicted RBP17.45■□□□□ 0.38
PTCHD3-202ENST00000622555 EIF2B5Q13144 721 aaKnown RBP17.45■□□□□ 0.38
PTCHD3-202ENST00000622555 XKR5Q6UX68 686 aa17.45■□□□□ 0.38
PTCHD3-202ENST00000622555 NEK10Q6ZWH5 1172 aa17.45■□□□□ 0.38
PTCHD3-202ENST00000622555 SLC22A15Q8IZD6 547 aa17.45■□□□□ 0.38
PTCHD3-202ENST00000622555 STAG3L4Q8TBR4 150 aa17.45■□□□□ 0.38
PTCHD3-202ENST00000622555 DYDC1Q8WWB3 177 aa17.45■□□□□ 0.38
PTCHD3-202ENST00000622555 EXT2Q93063 718 aa17.45■□□□□ 0.38
PTCHD3-202ENST00000622555 OSGEPL1Q9H4B0 414 aa17.45■□□□□ 0.38
PTCHD3-202ENST00000622555 MID2Q9UJV3 735 aa17.45■□□□□ 0.38
PTCHD3-202ENST00000622555 RNF112Q9ULX5 631 aa17.45■□□□□ 0.38
PTCHD3-202ENST00000622555 PLEKHM1Q9Y4G2 1056 aa17.45■□□□□ 0.38
PTCHD3-202ENST00000622555 FANCMQ8IYD8 2048 aa17.45■□□□□ 0.38
PTCHD3-202ENST00000622555 TNFP01375 233 aa17.44■□□□□ 0.38
PTCHD3-202ENST00000622555 DHRS4L1P0CG22 281 aa17.44■□□□□ 0.38
PTCHD3-202ENST00000622555 SERPINB4P48594 390 aa17.44■□□□□ 0.38
PTCHD3-202ENST00000622555 FOXR1Q6PIV2 292 aa17.44■□□□□ 0.38
PTCHD3-202ENST00000622555 PARGQ86W56 976 aa17.44■□□□□ 0.38
PTCHD3-202ENST00000622555 TMEM151AQ8N4L1 468 aa17.44■□□□□ 0.38
PTCHD3-202ENST00000622555 RHEBL1Q8TAI7 183 aa17.44■□□□□ 0.38
PTCHD3-202ENST00000622555 COL25A1Q9BXS0 654 aaPredicted RBP17.44■□□□□ 0.38
PTCHD3-202ENST00000622555 DGKBQ9Y6T7 804 aa17.44■□□□□ 0.38
PTCHD3-202ENST00000622555 WDR91A4D1P6 747 aa17.44■□□□□ 0.38
PTCHD3-202ENST00000622555 KCNJ13O60928 360 aa17.44■□□□□ 0.38
PTCHD3-202ENST00000622555 KERAO60938 352 aa17.44■□□□□ 0.38
PTCHD3-202ENST00000622555 SBK3P0C264 359 aa17.44■□□□□ 0.38
PTCHD3-202ENST00000622555 MYL2P10916 166 aa17.44■□□□□ 0.38
PTCHD3-202ENST00000622555 CPA3P15088 417 aa17.44■□□□□ 0.38
PTCHD3-202ENST00000622555 KCNC1P48547 511 aa17.44■□□□□ 0.38
PTCHD3-202ENST00000622555 CSNK1EP49674 416 aaKnown RBP17.44■□□□□ 0.38
PTCHD3-202ENST00000622555 AFF3P51826 1226 aaKnown RBP17.44■□□□□ 0.38
PTCHD3-202ENST00000622555 HK3P52790 923 aa17.44■□□□□ 0.38
PTCHD3-202ENST00000622555 IL9RQ01113 521 aa17.44■□□□□ 0.38
PTCHD3-202ENST00000622555 DMPKQ09013 629 aa17.44■□□□□ 0.38
PTCHD3-202ENST00000622555 ABRQ12979 859 aa17.44■□□□□ 0.38
PTCHD3-202ENST00000622555 RPA4Q13156 261 aa17.44■□□□□ 0.38
PTCHD3-202ENST00000622555 TCEA2Q15560 299 aa17.44■□□□□ 0.38
PTCHD3-202ENST00000622555 ZNF542PQ5EBM4 170 aa17.44■□□□□ 0.38
PTCHD3-202ENST00000622555 METRNLQ641Q3 311 aa17.44■□□□□ 0.38
PTCHD3-202ENST00000622555 ADAMTSL2Q86TH1 951 aa17.44■□□□□ 0.38
PTCHD3-202ENST00000622555 RDH11Q8TC12 318 aa17.44■□□□□ 0.38
PTCHD3-202ENST00000622555 TMEM168Q9H0V1 697 aa17.44■□□□□ 0.38
PTCHD3-202ENST00000622555 DPEP2Q9H4A9 486 aa17.44■□□□□ 0.38
PTCHD3-202ENST00000622555 COPG2Q9UBF2 871 aa17.44■□□□□ 0.38
PTCHD3-202ENST00000622555 ADAMTS6Q9UKP5 1117 aa17.44■□□□□ 0.38
PTCHD3-202ENST00000622555 CCDC189A1A4V9 331 aa17.43■□□□□ 0.38
PTCHD3-202ENST00000622555 TARM1B6A8C7 271 aa17.43■□□□□ 0.38
PTCHD3-202ENST00000622555 TAC1P20366 129 aa17.43■□□□□ 0.38
PTCHD3-202ENST00000622555 PI4KAP42356 2102 aa17.43■□□□□ 0.38
PTCHD3-202ENST00000622555 C21orf59P57076 290 aa17.43■□□□□ 0.38
PTCHD3-202ENST00000622555 LRP8Q14114 963 aa17.43■□□□□ 0.38
PTCHD3-202ENST00000622555 ZYG11AQ6WRX3 759 aa17.43■□□□□ 0.38
PTCHD3-202ENST00000622555 FRA10AC1Q70Z53 315 aa17.43■□□□□ 0.38
PTCHD3-202ENST00000622555 SPATS2Q86XZ4 545 aaKnown RBP17.43■□□□□ 0.38
PTCHD3-202ENST00000622555 GPSM1Q86YR5 675 aa17.43■□□□□ 0.38
PTCHD3-202ENST00000622555 ZBTB44Q8NCP5 570 aa17.43■□□□□ 0.38
PTCHD3-202ENST00000622555 CFAP61Q8NHU2 1237 aa17.43■□□□□ 0.38
PTCHD3-202ENST00000622555 BCAS4Q8TDM0 211 aa17.43■□□□□ 0.38
PTCHD3-202ENST00000622555 SKA1Q96BD8 255 aa17.43■□□□□ 0.38
PTCHD3-202ENST00000622555 ATOH8Q96SQ7 321 aa17.43■□□□□ 0.38
PTCHD3-202ENST00000622555 MECRQ9BV79 373 aa17.43■□□□□ 0.38
PTCHD3-202ENST00000622555 ACSL5Q9ULC5 683 aa17.43■□□□□ 0.38
PTCHD3-202ENST00000622555 PSMD13Q9UNM6 376 aa17.43■□□□□ 0.38
PTCHD3-202ENST00000622555 SYCE1LA8MT33 242 aa17.42■□□□□ 0.38
PTCHD3-202ENST00000622555 PRR33A8MZF0 331 aa17.42■□□□□ 0.38
PTCHD3-202ENST00000622555 SUPT3HB4E1H0 165 aa17.42■□□□□ 0.38
PTCHD3-202ENST00000622555 G3V2L1 256 aa17.42■□□□□ 0.38
PTCHD3-202ENST00000622555 VILLO15195 856 aa17.42■□□□□ 0.38
PTCHD3-202ENST00000622555 SUPT3HO75486 399 aa17.42■□□□□ 0.38
PTCHD3-202ENST00000622555 C8GP07360 202 aa17.42■□□□□ 0.38
PTCHD3-202ENST00000622555 BPGMP07738 259 aa17.42■□□□□ 0.38
PTCHD3-202ENST00000622555 NEFHP12036 1026 aa17.42■□□□□ 0.38
PTCHD3-202ENST00000622555 GNSP15586 552 aa17.42■□□□□ 0.38
PTCHD3-202ENST00000622555 KCNA4P22459 653 aa17.42■□□□□ 0.38
PTCHD3-202ENST00000622555 NXPH1P58417 271 aa17.42■□□□□ 0.38
PTCHD3-202ENST00000622555 CTBSQ01459 385 aa17.42■□□□□ 0.38
PTCHD3-202ENST00000622555 SIM2Q14190 667 aaPredicted RBP17.42■□□□□ 0.38
PTCHD3-202ENST00000622555 PCLAFQ15004 111 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 159.9 ms