RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 HERPUD2Q9BSE4 406 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 STK32BQ9NY57 414 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 GLTPQ9NZD2 209 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 NDUFAF4Q9P032 175 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 CORINQ9Y5Q5 1042 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 HEG1Q9ULI3 1381 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 C13orf42A0A1B0GVH6 325 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 IQCF5A8MTL0 148 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 OPN1SWP03999 348 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 TGFBR1P36897 503 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 MON1BQ7L1V2 547 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 SLC9A9Q8IVB4 645 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 ESAMQ96AP7 390 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 KLHL5Q96PQ7 755 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 CDCA7Q9BWT1 371 aaPredicted RBP4.97□□□□□ -1.61
VPS13D-214ENST00000620676 RAB23Q9ULC3 237 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 OR51F1A6NGY5 319 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 VPS26AO75436 327 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 CLEC2LP0C7M8 214 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 NOMO3P69849 1222 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 NOMO1Q15155 1222 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 FAM219BQ5XKK7 198 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 SLC25A24Q6NUK1 477 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 C1orf186Q6ZWK4 172 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 GALNT10Q86SR1 603 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 OR13J1Q8NGT2 312 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 TRIB2Q92519 343 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 TMEM176AQ96HP8 235 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 KCTD15Q96SI1 283 aaPredicted RBP4.97□□□□□ -1.61
VPS13D-214ENST00000620676 CGRRF1Q99675 332 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 ADAMDEC1O15204 470 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 PRH1P02810 166 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 UMPSP11172 480 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 CAV3P56539 151 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 TTLL4Q14679 1199 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 ARHGAP15Q53QZ3 475 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 FAM205BPQ63HN1 556 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 MBLAC2Q68D91 279 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 ZNF782Q6ZMW2 699 aaPredicted RBP4.97□□□□□ -1.61
VPS13D-214ENST00000620676 TMEM130Q8N3G9 435 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 C2CD4CQ8TF44 421 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 TRAPPC12Q8WVT3 735 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 CD300AQ9UGN4 299 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 DNMT3LQ9UJW3 386 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 FAM86C2PA6NEL3 165 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 TNFRSF11BO00300 401 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 CNTN5O94779 1100 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 SMIM18P0DKX4 95 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 ALAS2P22557 587 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 ETV3P41162 512 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 METTL11BQ5VVY1 283 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 SFRP4Q6FHJ7 346 aaPredicted RBP4.97□□□□□ -1.61
VPS13D-214ENST00000620676 PLD6Q8N2A8 252 aaKnown RBP4.97□□□□□ -1.61
VPS13D-214ENST00000620676 MFSD3Q96ES6 412 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 PCDHA10Q9Y5I2 948 aa4.97□□□□□ -1.61
VPS13D-214ENST00000620676 A0A1W2PRQ8 180 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 DNAJB5O75953 348 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 STAG3L1P0CL83 205 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 EPORP19235 508 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 IL1R2P27930 398 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 TIE1P35590 1138 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 ELP6Q0PNE2 266 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 GRM2Q14416 872 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 TEAD4Q15561 434 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 ZNF598Q86UK7 904 aaKnown RBP4.96□□□□□ -1.61
VPS13D-214ENST00000620676 SPATA22Q8NHS9 363 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 ACER1Q8TDN7 264 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 PIWIL1Q96J94 861 aaKnown RBP4.96□□□□□ -1.61
VPS13D-214ENST00000620676 NEDD4LQ96PU5 975 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 KCNA7Q96RP8 456 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 SUPT20HL2P0C7V6 817 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 ACO1P21399 889 aaKnown RBP4.96□□□□□ -1.61
VPS13D-214ENST00000620676 TNFSF9P41273 254 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 DPP6P42658 865 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 SUPT20HL1Q3ZLR7 823 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 INO80DQ53TQ3 878 aaPredicted RBP4.96□□□□□ -1.61
VPS13D-214ENST00000620676 STEAP3Q658P3 488 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 ADGRD2Q7Z7M1 963 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 DPP9Q86TI2 863 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 RIOX2Q8IUF8 465 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 PARP16Q8N5Y8 322 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 DNAJA4Q8WW22 397 aaPredicted RBP4.96□□□□□ -1.61
VPS13D-214ENST00000620676 C12orf57Q99622 126 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 CRB3Q9BUF7 120 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 TVP23BQ9NYZ1 205 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 CRLS1Q9UJA2 301 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 ANKDD1BA6NHY2 528 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 TTC34A8MYJ7 566 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 HOXC11O43248 304 aaPredicted RBP4.96□□□□□ -1.61
VPS13D-214ENST00000620676 PRG2P13727 222 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 MYF6P23409 242 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 NAPEPLDQ6IQ20 393 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 C2orf73Q8N5S3 287 aaPredicted RBP4.96□□□□□ -1.61
VPS13D-214ENST00000620676 NR4A3Q92570 626 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 NKD1Q969G9 470 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 ANKRA2Q9H9E1 313 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 SMURF1Q9HCE7 757 aa4.96□□□□□ -1.61
VPS13D-214ENST00000620676 CNOT11Q9UKZ1 510 aaKnown RBP4.96□□□□□ -1.61
VPS13D-214ENST00000620676 GOLGA4Q13439 2230 aaKnown RBP4.96□□□□□ -1.61
VPS13D-214ENST00000620676 APOC4-APOC2K7ER74 178 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms