RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 KIF17Q9P2E2 1029 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 ZDHHC2Q9UIJ5 367 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 MAGED2Q9UNF1 606 aaPredicted RBP10.22□□□□□ -0.77
VPS11-207ENST00000620429 EFCAB9A8MZ26 197 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 EEF2KO00418 725 aaKnown RBP10.22□□□□□ -0.77
VPS11-207ENST00000620429 NME4O00746 187 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 AKR7A2O43488 359 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 MSCO60682 206 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 ALPPP05187 535 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 C2P06681 752 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 ERVK-10P10266 1014 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 ARPP19P56211 112 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 CD47Q08722 323 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 ZNF273Q14593 569 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 CLCA4Q14CN2 919 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 HEATR6Q6AI08 1181 aaKnown RBP10.22□□□□□ -0.77
VPS11-207ENST00000620429 TIGD7Q6NT04 549 aaPredicted RBP10.22□□□□□ -0.77
VPS11-207ENST00000620429 RETSATQ6NUM9 610 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 TXNDC11Q6PKC3 985 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 CES3Q6UWW8 571 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 PHC2Q8IXK0 858 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 PLD6Q8N2A8 252 aaKnown RBP10.22□□□□□ -0.77
VPS11-207ENST00000620429 TMEM176AQ96HP8 235 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 SCYL1Q96KG9 808 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 ZNF408Q9H9D4 720 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 ENTPD7Q9NQZ7 604 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 ACSS2Q9NR19 701 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 SLC23A1Q9UHI7 598 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 MID2Q9UJV3 735 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 ELF5Q9UKW6 265 aaPredicted RBP10.22□□□□□ -0.77
VPS11-207ENST00000620429 MRPS7Q9Y2R9 242 aaKnown RBP10.22□□□□□ -0.77
VPS11-207ENST00000620429 OTOFQ9HC10 1997 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 SIP14410 1827 aa10.22□□□□□ -0.77
VPS11-207ENST00000620429 TBC1D4O60343 1298 aa10.21□□□□□ -0.77
VPS11-207ENST00000620429 FZD6O60353 706 aa10.21□□□□□ -0.77
VPS11-207ENST00000620429 STAU1O95793 577 aaKnown RBP10.21□□□□□ -0.77
VPS11-207ENST00000620429 RAB3AP20336 220 aa10.21□□□□□ -0.77
VPS11-207ENST00000620429 MAOBP27338 520 aa10.21□□□□□ -0.77
VPS11-207ENST00000620429 HLA-DMAP28067 261 aa10.21□□□□□ -0.77
VPS11-207ENST00000620429 HSD17B2P37059 387 aa10.21□□□□□ -0.77
VPS11-207ENST00000620429 HOXA1P49639 335 aaPredicted RBP10.21□□□□□ -0.77
VPS11-207ENST00000620429 SCNN1GP51170 649 aa10.21□□□□□ -0.77
VPS11-207ENST00000620429 CD83Q01151 205 aa10.21□□□□□ -0.77
VPS11-207ENST00000620429 FASTKQ14296 549 aaKnown RBP10.21□□□□□ -0.77
VPS11-207ENST00000620429 PRMT9Q6P2P2 845 aa10.21□□□□□ -0.77
VPS11-207ENST00000620429 METTL7BQ6UX53 244 aa10.21□□□□□ -0.77
VPS11-207ENST00000620429 ENKURQ8TC29 256 aa10.21□□□□□ -0.77
VPS11-207ENST00000620429 AKAP1Q92667 903 aaKnown RBP eCLIP10.21□□□□□ -0.77
VPS11-207ENST00000620429 TSEN34Q9BSV6 310 aaKnown RBP10.21□□□□□ -0.77
VPS11-207ENST00000620429 BCO2Q9BYV7 579 aa10.21□□□□□ -0.77
VPS11-207ENST00000620429 CCDC90BQ9GZT6 254 aa10.21□□□□□ -0.77
VPS11-207ENST00000620429 SPNS1Q9H2V7 528 aa10.21□□□□□ -0.77
VPS11-207ENST00000620429 TOR3AQ9H497 397 aa10.21□□□□□ -0.77
VPS11-207ENST00000620429 CATSPERBQ9H7T0 1116 aa10.21□□□□□ -0.77
VPS11-207ENST00000620429 NRBP2Q9NSY0 501 aa10.21□□□□□ -0.77
VPS11-207ENST00000620429 EVA1BQ9NVM1 165 aa10.21□□□□□ -0.77
VPS11-207ENST00000620429 FAM118AQ9NWS6 357 aa10.21□□□□□ -0.77
VPS11-207ENST00000620429 MTMR10Q9NXD2 777 aa10.21□□□□□ -0.77
VPS11-207ENST00000620429 ZNF224Q9NZL3 707 aa10.21□□□□□ -0.77
VPS11-207ENST00000620429 STAP1Q9ULZ2 295 aa10.21□□□□□ -0.77
VPS11-207ENST00000620429 MTF2Q9Y483 593 aaPredicted RBP10.21□□□□□ -0.77
VPS11-207ENST00000620429 TCRBV5S2A0A599 114 aa10.21□□□□□ -0.78
VPS11-207ENST00000620429 ZBTB42B2RXF5 422 aa10.21□□□□□ -0.78
VPS11-207ENST00000620429 E5RI56 91 aa10.21□□□□□ -0.78
VPS11-207ENST00000620429 SDHDO14521 159 aa10.21□□□□□ -0.78
VPS11-207ENST00000620429 SLC2A3P11169 496 aa10.21□□□□□ -0.78
VPS11-207ENST00000620429 AGXTP21549 392 aa10.21□□□□□ -0.78
VPS11-207ENST00000620429 ALAS2P22557 587 aa10.21□□□□□ -0.78
VPS11-207ENST00000620429 CD6P30203 668 aa10.21□□□□□ -0.78
VPS11-207ENST00000620429 PRKAR1BP31321 381 aa10.21□□□□□ -0.78
VPS11-207ENST00000620429 SDC4P31431 198 aa10.21□□□□□ -0.78
VPS11-207ENST00000620429 TGFBR2P37173 567 aa10.21□□□□□ -0.78
VPS11-207ENST00000620429 GBX2P52951 348 aaPredicted RBP10.21□□□□□ -0.78
VPS11-207ENST00000620429 MVKQ03426 396 aa10.21□□□□□ -0.78
VPS11-207ENST00000620429 ARL13AQ5H913 290 aaPredicted RBP10.21□□□□□ -0.78
VPS11-207ENST00000620429 RAP1GAP2Q684P5 730 aa10.21□□□□□ -0.78
VPS11-207ENST00000620429 FCRLBQ6BAA4 426 aa10.21□□□□□ -0.78
VPS11-207ENST00000620429 CCDC190Q86UF4 302 aa10.21□□□□□ -0.78
VPS11-207ENST00000620429 FAM124AQ86V42 546 aa10.21□□□□□ -0.78
VPS11-207ENST00000620429 YIPF7Q8N8F6 280 aa10.21□□□□□ -0.78
VPS11-207ENST00000620429 RNF149Q8NC42 400 aa10.21□□□□□ -0.78
VPS11-207ENST00000620429 FOXJ1Q92949 421 aa10.21□□□□□ -0.78
VPS11-207ENST00000620429 MOCOSQ96EN8 888 aa10.21□□□□□ -0.78
VPS11-207ENST00000620429 KLHL15Q96M94 604 aa10.21□□□□□ -0.78
VPS11-207ENST00000620429 PPP1R16BQ96T49 567 aa10.21□□□□□ -0.78
VPS11-207ENST00000620429 GPR20Q99678 358 aa10.21□□□□□ -0.78
VPS11-207ENST00000620429 HOPXQ9BPY8 73 aaPredicted RBP10.21□□□□□ -0.78
VPS11-207ENST00000620429 CDADC1Q9BWV3 514 aa10.21□□□□□ -0.78
VPS11-207ENST00000620429 TRMT13Q9NUP7 481 aaKnown RBP10.21□□□□□ -0.78
VPS11-207ENST00000620429 BFARQ9NZS9 450 aa10.21□□□□□ -0.78
VPS11-207ENST00000620429 PNMA8BQ9ULN7 279 aaPredicted RBP10.21□□□□□ -0.78
VPS11-207ENST00000620429 TMEM5Q9Y2B1 443 aa10.21□□□□□ -0.78
VPS11-207ENST00000620429 TRIP11Q15643 1979 aa10.21□□□□□ -0.78
VPS11-207ENST00000620429 PTGES3LE9PB15 166 aa10.2□□□□□ -0.78
VPS11-207ENST00000620429 ARPC2O15144 300 aa10.2□□□□□ -0.78
VPS11-207ENST00000620429 RGS5O15539 181 aa10.2□□□□□ -0.78
VPS11-207ENST00000620429 B4GALT5O43286 388 aa10.2□□□□□ -0.78
VPS11-207ENST00000620429 TLL1O43897 1013 aa10.2□□□□□ -0.78
VPS11-207ENST00000620429 PRSS23O95084 383 aa10.2□□□□□ -0.78
VPS11-207ENST00000620429 F7P08709 466 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms