RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 VCLP18206 1134 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 TFEBP19484 476 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 PDHA2P29803 388 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 PBLDP30039 288 aaPredicted RBP7.86□□□□□ -1.15
CPNE3-209ENST00000620393 ETV4P43268 484 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 GNPDA1P46926 289 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 GLRBP48167 497 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 CSNK1EP49674 416 aaKnown RBP7.86□□□□□ -1.15
CPNE3-209ENST00000620393 BLKP51451 505 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 AFF3P51826 1226 aaKnown RBP7.86□□□□□ -1.15
CPNE3-209ENST00000620393 KPNA2P52292 529 aaKnown RBP7.86□□□□□ -1.15
CPNE3-209ENST00000620393 HK3P52790 923 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 WDR4P57081 412 aaKnown RBP7.86□□□□□ -1.15
CPNE3-209ENST00000620393 NXPH1P58417 271 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 PPARDQ03181 441 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 ABRQ12979 859 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 LRP8Q14114 963 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 BOP1Q14137 746 aaKnown RBP7.86□□□□□ -1.15
CPNE3-209ENST00000620393 SIM2Q14190 667 aaPredicted RBP7.86□□□□□ -1.15
CPNE3-209ENST00000620393 NFE2L1Q14494 772 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 TEAD4Q15561 434 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 LVRNQ6Q4G3 990 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 XKR5Q6UX68 686 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 FAM83HQ6ZRV2 1179 aaPredicted RBP7.86□□□□□ -1.15
CPNE3-209ENST00000620393 ARMCX6Q7L4S7 300 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 CHST15Q7LFX5 561 aaPredicted RBP7.86□□□□□ -1.15
CPNE3-209ENST00000620393 RD3Q7Z3Z2 195 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 PIWIL4Q7Z3Z4 852 aaKnown RBP7.86□□□□□ -1.15
CPNE3-209ENST00000620393 SPATS2Q86XZ4 545 aaKnown RBP7.86□□□□□ -1.15
CPNE3-209ENST00000620393 HID1Q8IV36 788 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 RASGRP3Q8IV61 690 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 VRK3Q8IV63 474 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 SLC22A15Q8IZD6 547 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 MYO1HQ8N1T3 1032 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 LILRA3Q8N6C8 439 aaPredicted RBP7.86□□□□□ -1.15
CPNE3-209ENST00000620393 ANKRD42Q8N9B4 389 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 RHEBL1Q8TAI7 183 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 ASB11Q8WXH4 323 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 PTERQ96BW5 349 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 SCYL1Q96KG9 808 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 FAM111AQ96PZ2 611 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 OR2M4Q96R27 311 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 UNKQ9C0B0 810 aaKnown RBP7.86□□□□□ -1.15
CPNE3-209ENST00000620393 KLC4Q9NSK0 619 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 SLC17A7Q9P2U7 560 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 PILRBQ9UKJ0 227 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 PNMA8BQ9ULN7 279 aaPredicted RBP7.86□□□□□ -1.15
CPNE3-209ENST00000620393 DNAJC16Q9Y2G8 782 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 PLEKHM1Q9Y4G2 1056 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 ZDBF2Q9HCK1 2354 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 BDP1A6H8Y1 2624 aa7.86□□□□□ -1.15
CPNE3-209ENST00000620393 H3BM21 787 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 CDC7O00311 574 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 BTN3A1O00481 513 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 SLC16A5O15375 505 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 MATN4O95460 622 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 CSF2P04141 144 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 C8GP07360 202 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 SBK3P0C264 359 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 ACP5P13686 325 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 CPA3P15088 417 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 CHN1P15882 459 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 JUNDP17535 347 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 IDSP22304 550 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 ACADLP28330 430 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 DPP6P42658 865 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 PREPP48147 710 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 ATP1A2P50993 1020 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 C21orf59P57076 290 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 IRX4P78413 519 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 CTBSQ01459 385 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 OR4D1Q15615 310 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 TSNQ15631 228 aaKnown RBP7.85□□□□□ -1.15
CPNE3-209ENST00000620393 PLA2G4EQ3MJ16 856 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 SYTL3Q4VX76 610 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 ZNF542PQ5EBM4 170 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 TECRLQ5HYJ1 363 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 HHATQ5VTY9 493 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 CAPRIN2Q6IMN6 1127 aaKnown RBP7.85□□□□□ -1.15
CPNE3-209ENST00000620393 WASH2PQ6VEQ5 465 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 PARGQ86W56 976 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 GPSM1Q86YR5 675 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 SYT12Q8IV01 421 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 ARMC2Q8NEN0 867 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 RDH11Q8TC12 318 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 MGARPQ8TDB4 240 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 GPBAR1Q8TDU6 330 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 PIGKQ92643 395 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 GLMNQ92990 594 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 PDXPQ96GD0 296 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 ATOH8Q96SQ7 321 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 SLC12A9Q9BXP2 914 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 TMEM168Q9H0V1 697 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 OR52A5Q9H2C5 316 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 MRPL46Q9H2W6 279 aaKnown RBP7.85□□□□□ -1.15
CPNE3-209ENST00000620393 ALG9Q9H6U8 611 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 ERVMER34-1Q9H9K5 563 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 WASH6PQ9NQA3 447 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 TMEM74BQ9NUR3 256 aa7.85□□□□□ -1.15
CPNE3-209ENST00000620393 INTS9Q9NV88 658 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms