RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 TM7SF3Q9NS93 570 aa21.21■□□□□ 0.99
SGMS1-210ENST00000619438 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.2■□□□□ 0.98
SGMS1-210ENST00000619438 A0A1W2PR77 199 aa21.2■□□□□ 0.98
SGMS1-210ENST00000619438 IPO13O94829 963 aaKnown RBP21.2■□□□□ 0.98
SGMS1-210ENST00000619438 NCF2P19878 526 aaPredicted RBP21.2■□□□□ 0.98
SGMS1-210ENST00000619438 CTSKP43235 329 aa21.2■□□□□ 0.98
SGMS1-210ENST00000619438 CDKN2DP55273 166 aa21.2■□□□□ 0.98
SGMS1-210ENST00000619438 ELP6Q0PNE2 266 aa21.2■□□□□ 0.98
SGMS1-210ENST00000619438 TAF1AQ15573 450 aaPredicted RBP21.2■□□□□ 0.98
SGMS1-210ENST00000619438 TMEM259Q4ZIN3 620 aa21.2■□□□□ 0.98
SGMS1-210ENST00000619438 ACSBG2Q5FVE4 666 aa21.2■□□□□ 0.98
SGMS1-210ENST00000619438 PRAMEF14Q5SWL7 426 aa21.2■□□□□ 0.98
SGMS1-210ENST00000619438 SDCCAG8Q86SQ7 713 aaPredicted RBP21.2■□□□□ 0.98
SGMS1-210ENST00000619438 SPATA6LQ8N4H0 392 aa21.2■□□□□ 0.98
SGMS1-210ENST00000619438 KLHDC7BQ96G42 594 aa21.2■□□□□ 0.98
SGMS1-210ENST00000619438 FAR2Q96K12 515 aa21.2■□□□□ 0.98
SGMS1-210ENST00000619438 OR52B2Q96RD2 323 aa21.2■□□□□ 0.98
SGMS1-210ENST00000619438 TDRD1Q9BXT4 1180 aaKnown RBP21.2■□□□□ 0.98
SGMS1-210ENST00000619438 CATSPERZQ9NTU4 200 aa21.2■□□□□ 0.98
SGMS1-210ENST00000619438 CA5BQ9Y2D0 317 aa21.2■□□□□ 0.98
SGMS1-210ENST00000619438 PLXNA2O75051 1894 aa21.2■□□□□ 0.98
SGMS1-210ENST00000619438 BPTFQ12830 3046 aa21.19■□□□□ 0.98
SGMS1-210ENST00000619438 NCOR2Q9Y618 2525 aa21.19■□□□□ 0.98
SGMS1-210ENST00000619438 AREL1O15033 823 aa21.19■□□□□ 0.98
SGMS1-210ENST00000619438 DFNA5O60443 496 aa21.19■□□□□ 0.98
SGMS1-210ENST00000619438 NOVA1P51513 510 aaKnown RBP21.19■□□□□ 0.98
SGMS1-210ENST00000619438 GTF2A1P52655 376 aaPredicted RBP21.19■□□□□ 0.98
SGMS1-210ENST00000619438 KLF10Q13118 480 aa21.19■□□□□ 0.98
SGMS1-210ENST00000619438 SUZ12Q15022 739 aaKnown RBP21.19■□□□□ 0.98
SGMS1-210ENST00000619438 PSAPL1Q6NUJ1 521 aa21.19■□□□□ 0.98
SGMS1-210ENST00000619438 ACAD11Q709F0 780 aa21.19■□□□□ 0.98
SGMS1-210ENST00000619438 IQCHQ86VS3 1027 aa21.19■□□□□ 0.98
SGMS1-210ENST00000619438 ULK2Q8IYT8 1036 aa21.19■□□□□ 0.98
SGMS1-210ENST00000619438 CDKN2AIPNLQ96HQ2 116 aa21.19■□□□□ 0.98
SGMS1-210ENST00000619438 NSMCE3Q96MG7 304 aa21.19■□□□□ 0.98
SGMS1-210ENST00000619438 TCF12Q99081 682 aa21.19■□□□□ 0.98
SGMS1-210ENST00000619438 TRMOQ9BU70 441 aa21.19■□□□□ 0.98
SGMS1-210ENST00000619438 ZNF385DQ9H6B1 395 aa21.19■□□□□ 0.98
SGMS1-210ENST00000619438 FNDC3AQ9Y2H6 1198 aaKnown RBP21.19■□□□□ 0.98
SGMS1-210ENST00000619438 PCDHGC4Q9Y5F7 938 aa21.19■□□□□ 0.98
SGMS1-210ENST00000619438 KNL1Q8NG31 2342 aa21.19■□□□□ 0.98
SGMS1-210ENST00000619438 OR51F1A6NGY5 319 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 A8MT66 165 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 ZBTB14O43829 449 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 MMP20O60882 483 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 KCNK5O95279 499 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 PRLP01236 227 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 STC1P52823 247 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 MXRA7P84157 204 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 NFKB2Q00653 900 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 FOXK2Q01167 660 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 BTKQ06187 659 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 RALGPS1Q5JS13 557 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 ZNF549Q6P9A3 640 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP21.18■□□□□ 0.987e-7■■■■■ 59.7
SGMS1-210ENST00000619438 DEFB124Q8NES8 71 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 OR13C4Q8NGS5 318 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 SETD7Q8WTS6 366 aaKnown RBP21.18■□□□□ 0.98
SGMS1-210ENST00000619438 ANKRD49Q8WVL7 239 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 WDR60Q8WVS4 1066 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 MAELQ96JY0 434 aaKnown RBP21.18■□□□□ 0.98
SGMS1-210ENST00000619438 WRAP53Q9BUR4 548 aaKnown RBP21.18■□□□□ 0.98
SGMS1-210ENST00000619438 MCM8Q9UJA3 840 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.18■□□□□ 0.98
SGMS1-210ENST00000619438 TRPC5OSA6NMA1 111 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 UPK3BL1B0FP48 263 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 UPK3BL2E5RIL1 263 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 H0Y8X5 98 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 CCL22O00626 93 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 CIB2O75838 187 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 CD59P13987 128 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 CSRP1P21291 193 aaKnown RBP21.18■□□□□ 0.98
SGMS1-210ENST00000619438 CLDN2P57739 230 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 LSM12Q3MHD2 195 aaKnown RBP21.18■□□□□ 0.98
SGMS1-210ENST00000619438 C6orf163Q5TEZ5 329 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 AFTPHQ6ULP2 937 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 TMEM207Q6UWW9 146 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 CCNYL1Q8N7R7 359 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 ELF4Q99607 663 aaPredicted RBP21.18■□□□□ 0.98
SGMS1-210ENST00000619438 THTPAQ9BU02 230 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 C1QTNF2Q9BXJ5 285 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 SUDS3Q9H7L9 328 aaPredicted RBP21.18■□□□□ 0.98
SGMS1-210ENST00000619438 EML4Q9HC35 981 aaKnown RBP21.18■□□□□ 0.98
SGMS1-210ENST00000619438 PCDH12Q9NPG4 1184 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 MRGBPQ9NV56 204 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 CDYLQ9Y232 598 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 PCDHB9Q9Y5E1 797 aa21.18■□□□□ 0.98
SGMS1-210ENST00000619438 A0A088AWK7 358 aa21.17■□□□□ 0.98
SGMS1-210ENST00000619438 E9PBE3 544 aa21.17■□□□□ 0.98
SGMS1-210ENST00000619438 SH3BP5O60239 455 aa21.17■□□□□ 0.98
SGMS1-210ENST00000619438 KLHL41O60662 606 aa21.17■□□□□ 0.98
SGMS1-210ENST00000619438 PSMG1O95456 288 aa21.17■□□□□ 0.98
SGMS1-210ENST00000619438 ZNF883P0CG24 379 aa21.17■□□□□ 0.98
SGMS1-210ENST00000619438 THEGLP0DJG4 465 aa21.17■□□□□ 0.98
SGMS1-210ENST00000619438 COX4I1P13073 169 aa21.17■□□□□ 0.98
SGMS1-210ENST00000619438 CEACAM1P13688 526 aa21.17■□□□□ 0.98
SGMS1-210ENST00000619438 CCR10P46092 362 aa21.17■□□□□ 0.98
SGMS1-210ENST00000619438 TIAL1Q01085 375 aaKnown RBP eCLIP21.17■□□□□ 0.98
SGMS1-210ENST00000619438 SH2D4BQ5SQS7 431 aa21.17■□□□□ 0.98
SGMS1-210ENST00000619438 TLDC1Q6P9B6 456 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms