RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 RALGPS2Q86X27 583 aaPredicted RBP12.46□□□□□ -0.41
TNFAIP3-209ENST00000619035 DDIASQ8IXT1 998 aa12.46□□□□□ -0.41
TNFAIP3-209ENST00000619035 CLYBLQ8N0X4 340 aa12.46□□□□□ -0.41
TNFAIP3-209ENST00000619035 HDDC3Q8N4P3 179 aa12.46□□□□□ -0.41
TNFAIP3-209ENST00000619035 ENDOVQ8N8Q3 282 aaKnown RBP12.46□□□□□ -0.41
TNFAIP3-209ENST00000619035 CFAP61Q8NHU2 1237 aa12.46□□□□□ -0.41
TNFAIP3-209ENST00000619035 GANCQ8TET4 914 aa12.46□□□□□ -0.41
TNFAIP3-209ENST00000619035 ZNF483Q8TF39 744 aaPredicted RBP12.46□□□□□ -0.41
TNFAIP3-209ENST00000619035 DNASE1L2Q92874 299 aa12.46□□□□□ -0.41
TNFAIP3-209ENST00000619035 RSPH9Q9H1X1 276 aaPredicted RBP12.46□□□□□ -0.41
TNFAIP3-209ENST00000619035 ZNF385DQ9H6B1 395 aa12.46□□□□□ -0.41
TNFAIP3-209ENST00000619035 C8orf33Q9H7E9 229 aaPredicted RBP12.46□□□□□ -0.41
TNFAIP3-209ENST00000619035 WWOXQ9NZC7 414 aa12.46□□□□□ -0.41
TNFAIP3-209ENST00000619035 GIMAP2Q9UG22 337 aa12.46□□□□□ -0.41
TNFAIP3-209ENST00000619035 SERGEFQ9UGK8 458 aa12.46□□□□□ -0.41
TNFAIP3-209ENST00000619035 LIMD1Q9UGP4 676 aa12.46□□□□□ -0.41
TNFAIP3-209ENST00000619035 C15orf41Q9Y2V0 281 aa12.46□□□□□ -0.41
TNFAIP3-209ENST00000619035 PIAS3Q9Y6X2 628 aa12.46□□□□□ -0.41
TNFAIP3-209ENST00000619035 ATG2BQ96BY7 2078 aa12.46□□□□□ -0.41
TNFAIP3-209ENST00000619035 A0A1W2PP55 124 aa12.46□□□□□ -0.42
TNFAIP3-209ENST00000619035 TMEM202A6NGA9 273 aa12.46□□□□□ -0.42
TNFAIP3-209ENST00000619035 AP2A2O94973 939 aa12.46□□□□□ -0.42
TNFAIP3-209ENST00000619035 ENO3P13929 434 aaPredicted RBP12.46□□□□□ -0.42
TNFAIP3-209ENST00000619035 PTDSS1P48651 473 aaKnown RBP12.46□□□□□ -0.42
TNFAIP3-209ENST00000619035 NUDT2P50583 147 aa12.46□□□□□ -0.42
TNFAIP3-209ENST00000619035 CAMK2GQ13555 558 aaPredicted RBP12.46□□□□□ -0.42
TNFAIP3-209ENST00000619035 TMEM52BQ4KMG9 183 aa12.46□□□□□ -0.42
TNFAIP3-209ENST00000619035 TCHHL1Q5QJ38 904 aaPredicted RBP12.46□□□□□ -0.42
TNFAIP3-209ENST00000619035 HPS6Q86YV9 775 aa12.46□□□□□ -0.42
TNFAIP3-209ENST00000619035 STON2Q8WXE9 905 aa12.46□□□□□ -0.42
TNFAIP3-209ENST00000619035 C19orf60Q96EN9 201 aa12.46□□□□□ -0.42
TNFAIP3-209ENST00000619035 C3orf30Q96M34 536 aa12.46□□□□□ -0.42
TNFAIP3-209ENST00000619035 DCLRE1BQ9H816 532 aa12.46□□□□□ -0.42
TNFAIP3-209ENST00000619035 MEAF6Q9HAF1 191 aa12.46□□□□□ -0.42
TNFAIP3-209ENST00000619035 BTRCQ9Y297 605 aa12.46□□□□□ -0.42
TNFAIP3-209ENST00000619035 DNAJC15Q9Y5T4 150 aa12.46□□□□□ -0.42
TNFAIP3-209ENST00000619035 PRUNE2Q8WUY3 3088 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 PRR23AA6NEV1 266 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 CCNT2O60583 730 aaKnown RBP12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 ATG13O75143 517 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 CIB2O75838 187 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 MLYCDO95822 493 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 ADH1BP00325 375 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 GLULP15104 373 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 TBL3Q12788 808 aaKnown RBP12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 SMAD4Q13485 552 aaKnown RBP12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 SKIV2LQ15477 1246 aaKnown RBP12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 AGBL4Q5VU57 503 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 SDE2Q6IQ49 451 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 TMEM220Q6QAJ8 160 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 GK5Q6ZS86 529 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 UBE2R2Q712K3 238 aaPredicted RBP12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 SYVN1Q86TM6 617 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 PDPRQ8NCN5 879 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 HIPK4Q8NE63 616 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 OR56A4Q8NGH8 313 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 CEP70Q8NHQ1 597 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 TWIST2Q8WVJ9 160 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 NRG4Q8WWG1 115 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 STMN2Q93045 179 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 RCN3Q96D15 328 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 MSANTD3Q96H12 275 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 MAELQ96JY0 434 aaKnown RBP12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 CDK15Q96Q40 435 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 CCDC28BQ9BUN5 200 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 C1QTNF3Q9BXJ4 246 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 SLC6A17Q9H1V8 727 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 OR2AG1Q9H205 316 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 ARL15Q9NXU5 204 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 TIMM22Q9Y584 194 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 CKAP5Q14008 2032 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 LRRK1Q38SD2 2015 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 PABPN1LA6NDY0 278 aaKnown RBP12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 IGLON5A6NGN9 336 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 PIP5K1BO14986 540 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 KPNA5O15131 536 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 PCCBP05166 539 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 NTSR1P30989 418 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 MSX2P35548 267 aaPredicted RBP12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 GDF5P43026 501 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 PREPP48147 710 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 RPIAP49247 311 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 STARD3Q14849 445 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 CCDC6Q16204 474 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 PLEKHS1Q5SXH7 462 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 SWT1Q5T5J6 900 aaKnown RBP12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 ZNF776Q68DI1 518 aaPredicted RBP12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 GOLGA7Q7Z5G4 137 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 NET1Q7Z628 596 aaPredicted RBP12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 TRAPPC5Q8IUR0 188 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 OR52B6Q8NGF0 335 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 ASZ1Q8WWH4 475 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 ATP6V1E2Q96A05 226 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 NPAS2Q99743 824 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 MKRN2Q9H000 416 aaKnown RBP12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 NOL11Q9H8H0 719 aaKnown RBP12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 KCNK12Q9HB15 430 aa12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 CNOT6Q9ULM6 557 aaKnown RBP12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 TNPO3Q9Y5L0 923 aaKnown RBP12.45□□□□□ -0.42
TNFAIP3-209ENST00000619035 KRT87PA6NCN2 255 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms