RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 NUDT16L1Q9BRJ7 211 aaKnown RBP12.09□□□□□ -0.47
MATR3-227ENST00000618441 CNPY3Q9BT09 278 aa12.09□□□□□ -0.47
MATR3-227ENST00000618441 FAM83DQ9H4H8 585 aa12.09□□□□□ -0.47
MATR3-227ENST00000618441 CATSPERZQ9NTU4 200 aa12.09□□□□□ -0.47
MATR3-227ENST00000618441 SH3BGRL2Q9UJC5 107 aa12.09□□□□□ -0.47
MATR3-227ENST00000618441 RNF6Q9Y252 685 aa12.09□□□□□ -0.47
MATR3-227ENST00000618441 JAG1P78504 1218 aa12.08□□□□□ -0.47
MATR3-227ENST00000618441 ZNF45Q02386 682 aa12.08□□□□□ -0.47
MATR3-227ENST00000618441 PYDC2Q56P42 97 aa12.08□□□□□ -0.47
MATR3-227ENST00000618441 SHEQ5VZ18 495 aa12.08□□□□□ -0.47
MATR3-227ENST00000618441 CES5AQ6NT32 575 aa12.08□□□□□ -0.47
MATR3-227ENST00000618441 SWSAP1Q6NVH7 229 aa12.08□□□□□ -0.47
MATR3-227ENST00000618441 ARHGAP11AQ6P4F7 1023 aa12.08□□□□□ -0.47
MATR3-227ENST00000618441 ZNF600Q6ZNG1 722 aa12.08□□□□□ -0.47
MATR3-227ENST00000618441 RASSF6Q6ZTQ3 369 aa12.08□□□□□ -0.47
MATR3-227ENST00000618441 PCDH19Q8TAB3 1148 aa12.08□□□□□ -0.47
MATR3-227ENST00000618441 PYCR2Q96C36 320 aa12.08□□□□□ -0.47
MATR3-227ENST00000618441 SLC30A2Q9BRI3 323 aa12.08□□□□□ -0.47
MATR3-227ENST00000618441 AMBRA1Q9C0C7 1298 aa12.08□□□□□ -0.47
MATR3-227ENST00000618441 ZFP14Q9HCL3 533 aa12.08□□□□□ -0.47
MATR3-227ENST00000618441 COQ4Q9Y3A0 265 aa12.08□□□□□ -0.47
MATR3-227ENST00000618441 A0A1W2PQ09 198 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 TRIM77I1YAP6 450 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 DFNA5O60443 496 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 DIRAS1O95057 198 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 ADORA3P0DMS8 318 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 LIMK2P53671 638 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 PTPRCAPQ14761 206 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 ATF7IP2Q5U623 682 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 LIPIQ6XZB0 460 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 HDDC2Q7Z4H3 204 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 WDR49Q8IV35 697 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 DCBLD1Q8N8Z6 715 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 ANKRD53Q8N9V6 530 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 GPR78Q96P69 363 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 SPATA9Q9BWV2 254 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 RACGAP1Q9H0H5 632 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 KCNN2Q9H2S1 579 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 VWA7Q9Y334 891 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 RIPK3Q9Y572 518 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 PEX16Q9Y5Y5 336 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 PTPRJQ12913 1337 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 PSMD10O75832 226 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 SLC6A2P23975 617 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 BRCC3P46736 316 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 ATXN1P54253 815 aaKnown RBP12.08□□□□□ -0.48
MATR3-227ENST00000618441 CSNK2BP67870 215 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 C2orf80Q0P641 193 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 GALNT3Q14435 633 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 TIGD6Q17RP2 521 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 ZNF534Q76KX8 674 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 TMEM199Q8N511 208 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 C12orf57Q99622 126 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 EML4Q9HC35 981 aaKnown RBP12.08□□□□□ -0.48
MATR3-227ENST00000618441 CYTH4Q9UIA0 394 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 BAIAP2Q9UQB8 552 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 ACO1P21399 889 aaKnown RBP12.08□□□□□ -0.48
MATR3-227ENST00000618441 TBXAS1P24557 533 aaPredicted RBP12.08□□□□□ -0.48
MATR3-227ENST00000618441 SDC4P31431 198 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 CTSKP43235 329 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 RUNX1T1Q06455 604 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 PUDPQ08623 228 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 CDK5R2Q13319 367 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 UGP2Q16851 508 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 STXBP5Q5T5C0 1151 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 ZNF767PQ75MW2 155 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 ATG16L2Q8NAA4 619 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 TXNDC5Q8NBS9 432 aaKnown RBP12.08□□□□□ -0.48
MATR3-227ENST00000618441 OR10T2Q8NGX3 314 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 HMGCLL1Q8TB92 370 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 CLEC4DQ8WXI8 215 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 ST8SIA4Q92187 359 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 TOE1Q96GM8 510 aaKnown RBP12.08□□□□□ -0.48
MATR3-227ENST00000618441 GGA3Q9NZ52 723 aa12.08□□□□□ -0.48
MATR3-227ENST00000618441 SPATA31C2B4DYI2 1134 aa12.07□□□□□ -0.48
MATR3-227ENST00000618441 PEX10O60683 326 aa12.07□□□□□ -0.48
MATR3-227ENST00000618441 NR3C2P08235 984 aa12.07□□□□□ -0.48
MATR3-227ENST00000618441 GPD1P21695 349 aa12.07□□□□□ -0.48
MATR3-227ENST00000618441 BNC1Q01954 994 aa12.07□□□□□ -0.48
MATR3-227ENST00000618441 MED22Q15528 200 aa12.07□□□□□ -0.48
MATR3-227ENST00000618441 KLHL12Q53G59 568 aa12.07□□□□□ -0.48
MATR3-227ENST00000618441 LDLRAD1Q5T700 205 aa12.07□□□□□ -0.48
MATR3-227ENST00000618441 PRMT9Q6P2P2 845 aa12.07□□□□□ -0.48
MATR3-227ENST00000618441 BHLHB9Q6PI77 547 aa12.07□□□□□ -0.48
MATR3-227ENST00000618441 CRTC1Q6UUV9 634 aa12.07□□□□□ -0.48
MATR3-227ENST00000618441 TMPRSS11AQ6ZMR5 421 aa12.07□□□□□ -0.48
MATR3-227ENST00000618441 CLEC4MQ9H2X3 399 aaPredicted RBP12.07□□□□□ -0.48
MATR3-227ENST00000618441 TNFRSF12AQ9NP84 129 aa12.07□□□□□ -0.48
MATR3-227ENST00000618441 KCNH7Q9NS40 1196 aa12.07□□□□□ -0.48
MATR3-227ENST00000618441 A0A096LPI6 279 aa12.07□□□□□ -0.48
MATR3-227ENST00000618441 METTL15A6NJ78 407 aa12.07□□□□□ -0.48
MATR3-227ENST00000618441 SHOXO15266 292 aa12.07□□□□□ -0.48
MATR3-227ENST00000618441 SLC10A3P09131 477 aa12.07□□□□□ -0.48
MATR3-227ENST00000618441 C21orf33P30042 268 aaPredicted RBP12.07□□□□□ -0.48
MATR3-227ENST00000618441 LIPAP38571 399 aa12.07□□□□□ -0.48
MATR3-227ENST00000618441 ELOAQ14241 798 aaKnown RBP12.07□□□□□ -0.48
MATR3-227ENST00000618441 HSDL1Q3SXM5 330 aa12.07□□□□□ -0.48
MATR3-227ENST00000618441 ZACNQ401N2 412 aa12.07□□□□□ -0.48
MATR3-227ENST00000618441 KIF18BQ86Y91 864 aa12.07□□□□□ -0.48
MATR3-227ENST00000618441 LHFPL5Q8TAF8 219 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms