RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 HEMK1Q9Y5R4 338 aaPredicted RBP11.91□□□□□ -0.5
SRRT-216ENST00000618262 H3BRJ5 948 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 PCDH17O14917 1159 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 SLC2A3P11169 496 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 TYRP14679 529 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 FCARP24071 287 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 CD70P32970 193 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 ARSEP51690 589 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 SMAD1Q15797 465 aaKnown RBP11.91□□□□□ -0.5
SRRT-216ENST00000618262 DARS2Q6PI48 645 aaKnown RBP11.91□□□□□ -0.5
SRRT-216ENST00000618262 CYP20A1Q6UW02 462 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 FAM109AQ8N4B1 249 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 FOXJ1Q92949 421 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 HMCESQ96FZ2 354 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 CDK5RAP1Q96SZ6 601 aaKnown RBP11.91□□□□□ -0.5
SRRT-216ENST00000618262 ZYG11BQ9C0D3 744 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 SLC39A8Q9C0K1 460 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 FBRSL1Q9HCM7 1045 aaKnown RBP11.91□□□□□ -0.5
SRRT-216ENST00000618262 ABCB8Q9NUT2 735 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 PCM1Q15154 2024 aa11.91□□□□□ -0.5
SRRT-216ENST00000618262 ACOD1A6NK06 481 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 LINC00587B1AMM8 73 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 K7ERQ8 282 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 EIF3EP60228 445 aaKnown RBP11.9□□□□□ -0.5
SRRT-216ENST00000618262 MAXP61244 160 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 RAD51Q06609 339 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 POU6F1Q14863 301 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 PDK3Q15120 406 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 ZNF77Q15935 545 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 APCDD1Q8J025 514 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 CELF5Q8N6W0 485 aaKnown RBP11.9□□□□□ -0.5
SRRT-216ENST00000618262 ZSCAN1Q8NBB4 408 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 CHFRQ96EP1 664 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 CIPCQ9C0C6 399 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 FGFR1OP2Q9NVK5 253 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 COL4A3Q01955 1670 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 A0A1B0GTQ1 180 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 TRAFD1O14545 582 aaPredicted RBP11.9□□□□□ -0.5
SRRT-216ENST00000618262 TM9SF1O15321 606 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 NOS1APO75052 506 aaPredicted RBP11.9□□□□□ -0.5
SRRT-216ENST00000618262 MT-CO1P00395 513 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 UQCRBP14927 111 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 RBL1P28749 1068 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 WASP42768 502 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 CTSOP43234 321 aaPredicted RBP11.9□□□□□ -0.5
SRRT-216ENST00000618262 MMP13P45452 471 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 IFNAR2P48551 515 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 CDK9P50750 372 aaKnown RBP11.9□□□□□ -0.5
SRRT-216ENST00000618262 OLIG2Q13516 323 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 TLR1Q15399 786 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 PPP2R5EQ16537 467 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 POM121L1PQ3SYA9 428 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 C5orf22Q49AR2 442 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 RNF219Q5W0B1 726 aaPredicted RBP11.9□□□□□ -0.5
SRRT-216ENST00000618262 ASTLQ6HA08 431 aaPredicted RBP11.9□□□□□ -0.5
SRRT-216ENST00000618262 ZNF574Q6ZN55 896 aaPredicted RBP11.9□□□□□ -0.5
SRRT-216ENST00000618262 FAM26EQ8N5C1 309 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 ASCC1Q8N9N2 400 aaKnown RBP11.9□□□□□ -0.5
SRRT-216ENST00000618262 ICA1LQ8NDH6 482 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 VANGL1Q8TAA9 524 aaPredicted RBP11.9□□□□□ -0.5
SRRT-216ENST00000618262 CYB5D2Q8WUJ1 264 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 PLD4Q96BZ4 506 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 DEPDC7Q96QD5 511 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 STN1Q9H668 368 aaKnown RBP11.9□□□□□ -0.5
SRRT-216ENST00000618262 KCNK12Q9HB15 430 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 HEBP1Q9NRV9 189 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 DNAJC17Q9NVM6 304 aaKnown RBP11.9□□□□□ -0.5
SRRT-216ENST00000618262 NFKBIL1Q9UBC1 381 aaPredicted RBP11.9□□□□□ -0.5
SRRT-216ENST00000618262 NEU3Q9UQ49 428 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 ENTPD4Q9Y227 616 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 MAN2B2Q9Y2E5 1009 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 CEPT1Q9Y6K0 416 aa11.9□□□□□ -0.5
SRRT-216ENST00000618262 TOR1AO14656 332 aa11.89□□□□□ -0.51
SRRT-216ENST00000618262 ITM2AO43736 263 aa11.89□□□□□ -0.51
SRRT-216ENST00000618262 STK19P49842 368 aaPredicted RBP11.89□□□□□ -0.51
SRRT-216ENST00000618262 BTKQ06187 659 aa11.89□□□□□ -0.51
SRRT-216ENST00000618262 GRSF1Q12849 480 aaKnown RBP eCLIP11.89□□□□□ -0.51
SRRT-216ENST00000618262 LRRC38Q5VT99 294 aa11.89□□□□□ -0.51
SRRT-216ENST00000618262 CAMK1DQ8IU85 385 aa11.89□□□□□ -0.51
SRRT-216ENST00000618262 NTAN1Q96AB6 310 aa11.89□□□□□ -0.51
SRRT-216ENST00000618262 TNKS2Q9H2K2 1166 aa11.89□□□□□ -0.51
SRRT-216ENST00000618262 ZNF275Q9NSD4 429 aaPredicted RBP11.89□□□□□ -0.51
SRRT-216ENST00000618262 VPS28Q9UK41 221 aa11.89□□□□□ -0.51
SRRT-216ENST00000618262 PCDHB3Q9Y5E6 796 aa11.89□□□□□ -0.51
SRRT-216ENST00000618262 TMEM265A0A087WTH1 108 aa11.89□□□□□ -0.51
SRRT-216ENST00000618262 WASH3PC4AMC7 463 aa11.89□□□□□ -0.51
SRRT-216ENST00000618262 H3BSA7 217 aa11.89□□□□□ -0.51
SRRT-216ENST00000618262 FPGTO14772 594 aa11.89□□□□□ -0.51
SRRT-216ENST00000618262 KCNN4O15554 427 aa11.89□□□□□ -0.51
SRRT-216ENST00000618262 JRKO75564 520 aa11.89□□□□□ -0.51
SRRT-216ENST00000618262 SERPINI2O75830 405 aa11.89□□□□□ -0.51
SRRT-216ENST00000618262 CSKP41240 450 aa11.89□□□□□ -0.51
SRRT-216ENST00000618262 RING1Q06587 406 aa11.89□□□□□ -0.51
SRRT-216ENST00000618262 ITKQ08881 620 aa11.89□□□□□ -0.51
SRRT-216ENST00000618262 ABRQ12979 859 aa11.89□□□□□ -0.51
SRRT-216ENST00000618262 PDK2Q15119 407 aa11.89□□□□□ -0.51
SRRT-216ENST00000618262 HP1BP3Q5SSJ5 553 aaPredicted RBP11.89□□□□□ -0.51
SRRT-216ENST00000618262 SLC6A19Q695T7 634 aa11.89□□□□□ -0.51
SRRT-216ENST00000618262 CCDC137Q6PK04 289 aaKnown RBP11.89□□□□□ -0.51
SRRT-216ENST00000618262 CLIP4Q8N3C7 705 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms