RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 ADAMTSL4Q6UY14 1074 aa17.26■□□□□ 0.35
TRAPPC3-209ENST00000616395 ARHGEF18Q6ZSZ5 1173 aa17.26■□□□□ 0.35
TRAPPC3-209ENST00000616395 CENPUQ71F23 418 aa17.26■□□□□ 0.35
TRAPPC3-209ENST00000616395 TMC3Q7Z5M5 1100 aa17.26■□□□□ 0.35
TRAPPC3-209ENST00000616395 ATPAF2Q8N5M1 289 aa17.26■□□□□ 0.35
TRAPPC3-209ENST00000616395 PNPLA2Q96AD5 504 aa17.26■□□□□ 0.35
TRAPPC3-209ENST00000616395 TTC25Q96NG3 672 aa17.26■□□□□ 0.35
TRAPPC3-209ENST00000616395 TGM7Q96PF1 710 aa17.26■□□□□ 0.35
TRAPPC3-209ENST00000616395 RANBP9Q96S59 729 aa17.26■□□□□ 0.35
TRAPPC3-209ENST00000616395 CCDC77Q9BR77 488 aa17.26■□□□□ 0.35
TRAPPC3-209ENST00000616395 AKIRIN1Q9H9L7 192 aaPredicted RBP17.26■□□□□ 0.35
TRAPPC3-209ENST00000616395 ASF1BQ9NVP2 202 aa17.26■□□□□ 0.35
TRAPPC3-209ENST00000616395 CD84Q9UIB8 345 aa17.26■□□□□ 0.35
TRAPPC3-209ENST00000616395 NEU2Q9Y3R4 380 aa17.26■□□□□ 0.35
TRAPPC3-209ENST00000616395 PCDHGB7Q9Y5F8 929 aa17.26■□□□□ 0.35
TRAPPC3-209ENST00000616395 F8P00451 2351 aa17.26■□□□□ 0.35
TRAPPC3-209ENST00000616395 SETD2Q9BYW2 2564 aaPredicted RBP17.26■□□□□ 0.35
TRAPPC3-209ENST00000616395 ITPR3Q14573 2671 aa17.25■□□□□ 0.35
TRAPPC3-209ENST00000616395 NPIPB15A6NHN6 443 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC3-209ENST00000616395 E7EVH7 732 aa17.25■□□□□ 0.35
TRAPPC3-209ENST00000616395 CEACAM4O75871 244 aa17.25■□□□□ 0.35
TRAPPC3-209ENST00000616395 PEX11BO96011 259 aa17.25■□□□□ 0.35
TRAPPC3-209ENST00000616395 TYRP1P17643 537 aa17.25■□□□□ 0.35
TRAPPC3-209ENST00000616395 PTPN4P29074 926 aa17.25■□□□□ 0.35
TRAPPC3-209ENST00000616395 FDFT1P37268 417 aa17.25■□□□□ 0.35
TRAPPC3-209ENST00000616395 ARL4CP56559 192 aa17.25■□□□□ 0.35
TRAPPC3-209ENST00000616395 DPTQ07507 201 aa17.25■□□□□ 0.35
TRAPPC3-209ENST00000616395 AP1B1Q10567 949 aa17.25■□□□□ 0.35
TRAPPC3-209ENST00000616395 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.25■□□□□ 0.35
TRAPPC3-209ENST00000616395 FAM182AQ5T1J6 154 aa17.25■□□□□ 0.35
TRAPPC3-209ENST00000616395 TIGD7Q6NT04 549 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC3-209ENST00000616395 FAM199XQ6PEV8 388 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC3-209ENST00000616395 CHST15Q7LFX5 561 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC3-209ENST00000616395 TSPAN33Q86UF1 283 aa17.25■□□□□ 0.35
TRAPPC3-209ENST00000616395 CCDC25Q86WR0 208 aa17.25■□□□□ 0.35
TRAPPC3-209ENST00000616395 FDCSPQ8NFU4 85 aa17.25■□□□□ 0.35
TRAPPC3-209ENST00000616395 SPOCK2Q92563 424 aa17.25■□□□□ 0.35
TRAPPC3-209ENST00000616395 VAT1Q99536 393 aa17.25■□□□□ 0.35
TRAPPC3-209ENST00000616395 DTLQ9NZJ0 730 aa17.25■□□□□ 0.35
TRAPPC3-209ENST00000616395 CPNE7Q9UBL6 633 aa17.25■□□□□ 0.35
TRAPPC3-209ENST00000616395 ZNHIT2Q9UHR6 403 aa17.25■□□□□ 0.35
TRAPPC3-209ENST00000616395 ENTPD4Q9Y227 616 aa17.25■□□□□ 0.35
TRAPPC3-209ENST00000616395 KCNK6Q9Y257 313 aa17.25■□□□□ 0.35
TRAPPC3-209ENST00000616395 PCDHGC4Q9Y5F7 938 aa17.25■□□□□ 0.35
TRAPPC3-209ENST00000616395 NF1P21359 2839 aa17.25■□□□□ 0.35
TRAPPC3-209ENST00000616395 CSMD2Q7Z408 3487 aa17.25■□□□□ 0.35
TRAPPC3-209ENST00000616395 A0A0U1RQS6 177 aa17.24■□□□□ 0.35
TRAPPC3-209ENST00000616395 ANKUB1A6NFN9 424 aa17.24■□□□□ 0.35
TRAPPC3-209ENST00000616395 C5orf60A6NFR6 353 aa17.24■□□□□ 0.35
TRAPPC3-209ENST00000616395 EIF3HO15372 352 aaKnown RBP eCLIP17.24■□□□□ 0.35
TRAPPC3-209ENST00000616395 MAFKO60675 156 aa17.24■□□□□ 0.35
TRAPPC3-209ENST00000616395 SNX2O60749 519 aa17.24■□□□□ 0.35
TRAPPC3-209ENST00000616395 CPP00450 1065 aa17.24■□□□□ 0.35
TRAPPC3-209ENST00000616395 FAM153BP0C7A2 387 aa17.24■□□□□ 0.35
TRAPPC3-209ENST00000616395 RBL1P28749 1068 aa17.24■□□□□ 0.35
TRAPPC3-209ENST00000616395 ECHS1P30084 290 aa17.24■□□□□ 0.35
TRAPPC3-209ENST00000616395 LMAN1P49257 510 aa17.24■□□□□ 0.35
TRAPPC3-209ENST00000616395 AP1S1P61966 158 aa17.24■□□□□ 0.35
TRAPPC3-209ENST00000616395 BASP1P80723 227 aaKnown RBP17.24■□□□□ 0.35
TRAPPC3-209ENST00000616395 GBE1Q04446 702 aa17.24■□□□□ 0.35
TRAPPC3-209ENST00000616395 LBRQ14739 615 aaKnown RBP17.24■□□□□ 0.35
TRAPPC3-209ENST00000616395 FAM153CQ494X1 144 aa17.24■□□□□ 0.35
TRAPPC3-209ENST00000616395 TMCO4Q5TGY1 634 aa17.24■□□□□ 0.35
TRAPPC3-209ENST00000616395 ITPRIPL1Q6GPH6 555 aa17.24■□□□□ 0.35
TRAPPC3-209ENST00000616395 HIBCHQ6NVY1 386 aaPredicted RBP17.24■□□□□ 0.35
TRAPPC3-209ENST00000616395 TECPR1Q7Z6L1 1165 aa17.24■□□□□ 0.35
TRAPPC3-209ENST00000616395 SYVN1Q86TM6 617 aa17.24■□□□□ 0.35
TRAPPC3-209ENST00000616395 PPP1R3BQ86XI6 285 aa17.24■□□□□ 0.35
TRAPPC3-209ENST00000616395 PGBD5Q8N414 524 aa17.24■□□□□ 0.35
TRAPPC3-209ENST00000616395 NUDT9Q9BW91 350 aa17.24■□□□□ 0.35
TRAPPC3-209ENST00000616395 GPR87Q9BY21 358 aa17.24■□□□□ 0.35
TRAPPC3-209ENST00000616395 FAM153AQ9UHL3 310 aa17.24■□□□□ 0.35
TRAPPC3-209ENST00000616395 LILRA5A6NI73 299 aa17.23■□□□□ 0.35
TRAPPC3-209ENST00000616395 GOLGA8KD6RF30 607 aa17.23■□□□□ 0.35
TRAPPC3-209ENST00000616395 PSMD11O00231 422 aa17.23■□□□□ 0.35
TRAPPC3-209ENST00000616395 TOX3O15405 576 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC3-209ENST00000616395 HTRA2O43464 458 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC3-209ENST00000616395 RASSF9O75901 435 aa17.23■□□□□ 0.35
TRAPPC3-209ENST00000616395 RPL22P35268 128 aaKnown RBP17.23■□□□□ 0.35
TRAPPC3-209ENST00000616395 MAXP61244 160 aa17.23■□□□□ 0.35
TRAPPC3-209ENST00000616395 LAMB3Q13751 1172 aa17.23■□□□□ 0.35
TRAPPC3-209ENST00000616395 ZNF235Q14590 738 aa17.23■□□□□ 0.35
TRAPPC3-209ENST00000616395 TRADDQ15628 312 aa17.23■□□□□ 0.35
TRAPPC3-209ENST00000616395 ZDHHC24Q6UX98 284 aa17.23■□□□□ 0.35
TRAPPC3-209ENST00000616395 MCEMP1Q8IX19 187 aa17.23■□□□□ 0.35
TRAPPC3-209ENST00000616395 PDIK1LQ8N165 341 aa17.23■□□□□ 0.35
TRAPPC3-209ENST00000616395 CISD2Q8N5K1 135 aaKnown RBP17.23■□□□□ 0.35
TRAPPC3-209ENST00000616395 NSMCE1Q8WV22 266 aa17.23■□□□□ 0.35
TRAPPC3-209ENST00000616395 AP2M1Q96CW1 435 aa17.23■□□□□ 0.35
TRAPPC3-209ENST00000616395 STMN4Q9H169 189 aaPredicted RBP17.23■□□□□ 0.35
TRAPPC3-209ENST00000616395 ABCG8Q9H221 673 aa17.23■□□□□ 0.35
TRAPPC3-209ENST00000616395 TRHDEQ9UKU6 1024 aa17.23■□□□□ 0.35
TRAPPC3-209ENST00000616395 KIR2DS5A0A0G2JLQ3 304 aa17.22■□□□□ 0.35
TRAPPC3-209ENST00000616395 A0A0G2JNG1 304 aa17.22■□□□□ 0.35
TRAPPC3-209ENST00000616395 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.22■□□□□ 0.35
TRAPPC3-209ENST00000616395 KIR2DS3K7RE56 304 aa17.22■□□□□ 0.35
TRAPPC3-209ENST00000616395 KIF1CO43896 1103 aaKnown RBP17.22■□□□□ 0.35
TRAPPC3-209ENST00000616395 DNAJC6O75061 913 aa17.22■□□□□ 0.35
TRAPPC3-209ENST00000616395 ASMTLO95671 621 aa17.22■□□□□ 0.35
TRAPPC3-209ENST00000616395 CYP2A6P11509 494 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms