RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 FIBINQ8TAL6 211 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 DENND1AQ8TEH3 1009 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 EXOC2Q96KP1 924 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 CNBD2Q96M20 576 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 LGMNQ99538 433 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 SIK2Q9H0K1 926 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 SLC25A51Q9H1U9 297 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 ATXN3LQ9H3M9 355 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 NUDT5Q9UKK9 219 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 TRAF6Q9Y4K3 522 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 COL4A3Q01955 1670 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 MUC22E2RYF6 1773 aaPredicted RBP8.69□□□□□ -1.02
VPS11-206ENST00000614944 DNAH12Q6ZR08 3092 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 GIPC1O14908 333 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 CCL16O15467 120 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 SLITRK5O94991 958 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 SNAPINO95295 136 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 EPOP01588 193 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 APOA4P06727 396 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 APEHP13798 732 aaKnown RBP8.69□□□□□ -1.02
VPS11-206ENST00000614944 ETS1P14921 441 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 ALOX12P18054 663 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 PEX2P28328 305 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 ACSL1P33121 698 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 TTKP33981 857 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 PBX2P40425 430 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 CCR2P41597 374 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 MAGEA4P43358 317 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 MASP1P48740 699 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 GEMP55040 296 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 CREB5Q02930 508 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 GNA12Q03113 381 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 TOP3AQ13472 1001 aaPredicted RBP8.69□□□□□ -1.02
VPS11-206ENST00000614944 CCINQ13939 588 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 POLD3Q15054 466 aaPredicted RBP8.69□□□□□ -1.02
VPS11-206ENST00000614944 TRIP10Q15642 601 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 CXorf57Q6NSI4 855 aaKnown RBP8.69□□□□□ -1.02
VPS11-206ENST00000614944 ANKRD54Q6NXT1 300 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 ZNF534Q76KX8 674 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 DENND1CQ8IV53 801 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 CELF5Q8N6W0 485 aaKnown RBP8.69□□□□□ -1.02
VPS11-206ENST00000614944 FOXJ1Q92949 421 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 ATP6V1E2Q96A05 226 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 ALG14Q96F25 216 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 TMEM68Q96MH6 324 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 C12orf57Q99622 126 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 RPRD1BQ9NQG5 326 aaKnown RBP8.69□□□□□ -1.02
VPS11-206ENST00000614944 TAS2R1Q9NYW7 299 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 SUCOQ9UBS9 1254 aaKnown RBP8.69□□□□□ -1.02
VPS11-206ENST00000614944 IPO11Q9UI26 975 aaKnown RBP8.69□□□□□ -1.02
VPS11-206ENST00000614944 FBXO10Q9UK96 956 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 RAB26Q9ULW5 256 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 EIF3LQ9Y262 564 aaKnown RBP8.69□□□□□ -1.02
VPS11-206ENST00000614944 TEX264Q9Y6I9 313 aa8.69□□□□□ -1.02
VPS11-206ENST00000614944 METTL18O95568 372 aa8.68□□□□□ -1.02
VPS11-206ENST00000614944 TAC1P20366 129 aa8.68□□□□□ -1.02
VPS11-206ENST00000614944 PTX3P26022 381 aaPredicted RBP8.68□□□□□ -1.02
VPS11-206ENST00000614944 HOXD9P28356 352 aaPredicted RBP8.68□□□□□ -1.02
VPS11-206ENST00000614944 CD68P34810 354 aaPredicted RBP8.68□□□□□ -1.02
VPS11-206ENST00000614944 BNIP3Q12983 259 aa8.68□□□□□ -1.02
VPS11-206ENST00000614944 ELOAQ14241 798 aaKnown RBP8.68□□□□□ -1.02
VPS11-206ENST00000614944 STAT4Q14765 748 aa8.68□□□□□ -1.02
VPS11-206ENST00000614944 UGP2Q16851 508 aa8.68□□□□□ -1.02
VPS11-206ENST00000614944 RBM20Q5T481 1227 aaKnown RBP8.68□□□□□ -1.02
VPS11-206ENST00000614944 GPR158Q5T848 1215 aa8.68□□□□□ -1.02
VPS11-206ENST00000614944 TXNDC8Q6A555 127 aa8.68□□□□□ -1.02
VPS11-206ENST00000614944 HMBOX1Q6NT76 420 aa8.68□□□□□ -1.02
VPS11-206ENST00000614944 UGT3A1Q6NUS8 523 aa8.68□□□□□ -1.02
VPS11-206ENST00000614944 ADGRD2Q7Z7M1 963 aa8.68□□□□□ -1.02
VPS11-206ENST00000614944 TAGAPQ8N103 731 aa8.68□□□□□ -1.02
VPS11-206ENST00000614944 PDIK1LQ8N165 341 aa8.68□□□□□ -1.02
VPS11-206ENST00000614944 DCAF4L2Q8NA75 395 aa8.68□□□□□ -1.02
VPS11-206ENST00000614944 ZFYVE19Q96K21 471 aa8.68□□□□□ -1.02
VPS11-206ENST00000614944 TBATAQ96M53 351 aa8.68□□□□□ -1.02
VPS11-206ENST00000614944 RBM15Q96T37 977 aaKnown RBP eCLIP8.68□□□□□ -1.026e-7■■■■■ 36.2
VPS11-206ENST00000614944 FAM118BQ9BPY3 351 aa8.68□□□□□ -1.02
VPS11-206ENST00000614944 MGME1Q9BQP7 344 aa8.68□□□□□ -1.02
VPS11-206ENST00000614944 C1orf50Q9BV19 199 aa8.68□□□□□ -1.02
VPS11-206ENST00000614944 GLOD4Q9HC38 313 aa8.68□□□□□ -1.02
VPS11-206ENST00000614944 TDP1Q9NUW8 608 aa8.68□□□□□ -1.02
VPS11-206ENST00000614944 LGALS13Q9UHV8 139 aa8.68□□□□□ -1.02
VPS11-206ENST00000614944 DTX4Q9Y2E6 619 aa8.68□□□□□ -1.02
VPS11-206ENST00000614944 COL4A2P08572 1712 aa8.68□□□□□ -1.02
VPS11-206ENST00000614944 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.68□□□□□ -1.02
VPS11-206ENST00000614944 CCDC195A0A1B0GUA6 201 aa8.68□□□□□ -1.02
VPS11-206ENST00000614944 DNAJA2O60884 412 aa8.68□□□□□ -1.02
VPS11-206ENST00000614944 CNTN5O94779 1100 aa8.68□□□□□ -1.02
VPS11-206ENST00000614944 TMEM63AO94886 807 aa8.68□□□□□ -1.02
VPS11-206ENST00000614944 MOCS2O96007 188 aaPredicted RBP8.68□□□□□ -1.02
VPS11-206ENST00000614944 TP53P04637 393 aaPredicted RBP8.68□□□□□ -1.02
VPS11-206ENST00000614944 LTA4HP09960 611 aaKnown RBP8.68□□□□□ -1.02
VPS11-206ENST00000614944 ADRA1AP35348 466 aa8.68□□□□□ -1.02
VPS11-206ENST00000614944 HTR2BP41595 481 aa8.68□□□□□ -1.02
VPS11-206ENST00000614944 ZXDBP98169 803 aa8.68□□□□□ -1.02
VPS11-206ENST00000614944 ZNF177Q13360 481 aaPredicted RBP8.68□□□□□ -1.02
VPS11-206ENST00000614944 ADAM15Q13444 863 aa8.68□□□□□ -1.02
VPS11-206ENST00000614944 KRT74Q7RTS7 529 aa8.68□□□□□ -1.02
VPS11-206ENST00000614944 MTDHQ86UE4 582 aaKnown RBP8.68□□□□□ -1.02
VPS11-206ENST00000614944 TBC1D21Q8IYX1 336 aa8.68□□□□□ -1.02
VPS11-206ENST00000614944 OR8H1Q8NGG4 311 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms