RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 GPC4O75487 556 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 PROCP04070 461 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 CCDC166P0CW27 439 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 THEGLP0DJG4 465 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 RALBP11234 206 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 CD1DP15813 335 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 RPA3P35244 121 aaPredicted RBP7.88□□□□□ -1.15
PCDH9-205ENST00000614931 NUDT1P36639 197 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 CTSKP43235 329 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 ETV4P43268 484 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 PREPP48147 710 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 ATP1A2P50993 1020 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 GYS2P54840 703 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 SLC12A2P55011 1212 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 PPP2R2AP63151 447 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 RACK1P63244 317 aaKnown RBP7.88□□□□□ -1.15
PCDH9-205ENST00000614931 SIM1P81133 766 aaPredicted RBP7.88□□□□□ -1.15
PCDH9-205ENST00000614931 ILF2Q12905 390 aaKnown RBP7.88□□□□□ -1.15
PCDH9-205ENST00000614931 EIF2B5Q13144 721 aaKnown RBP7.88□□□□□ -1.15
PCDH9-205ENST00000614931 GTF2H3Q13889 308 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 BOP1Q14137 746 aaKnown RBP7.88□□□□□ -1.15
PCDH9-205ENST00000614931 FZD2Q14332 565 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 NFE2L1Q14494 772 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 OR4D1Q15615 310 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 TRIP6Q15654 476 aaKnown RBP7.88□□□□□ -1.15
PCDH9-205ENST00000614931 ZNF423Q2M1K9 1284 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 ALG11Q2TAA5 492 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 PYCR3Q53H96 274 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 TAF1BQ53T94 588 aaPredicted RBP7.88□□□□□ -1.15
PCDH9-205ENST00000614931 TECRLQ5HYJ1 363 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 ENPP7Q6UWV6 458 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 CYHR1Q6ZMK1 362 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 GLRX5Q86SX6 157 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 LRRTM4Q86VH4 590 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 SPATS2Q86XZ4 545 aaKnown RBP7.88□□□□□ -1.15
PCDH9-205ENST00000614931 TMEM151AQ8N4L1 468 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 OXR1Q8N573 874 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 ANKRD42Q8N9B4 389 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 TCP10LQ8TDR4 215 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 ELMO1Q92556 727 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 INPP5DQ92835 1189 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 TSACCQ96A04 125 aaPredicted RBP7.88□□□□□ -1.15
PCDH9-205ENST00000614931 LINGO1Q96FE5 620 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 TSPAN17Q96FV3 270 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 LINC00615Q96LM1 132 aaPredicted RBP7.88□□□□□ -1.15
PCDH9-205ENST00000614931 WDR92Q96MX6 357 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 FAM111AQ96PZ2 611 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 CCM2Q9BSQ5 444 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 ZCCHC2Q9C0B9 1178 aaKnown RBP7.88□□□□□ -1.15
PCDH9-205ENST00000614931 SSU72Q9NP77 194 aaKnown RBP7.88□□□□□ -1.15
PCDH9-205ENST00000614931 KCNK9Q9NPC2 374 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 AASDHPPTQ9NRN7 309 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 SPATS2LQ9NUQ6 558 aaKnown RBP7.88□□□□□ -1.15
PCDH9-205ENST00000614931 KLF15Q9UIH9 416 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 MOSPD1Q9UJG1 213 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 PCOLCE2Q9UKZ9 415 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 GRID1Q9ULK0 1009 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 ACOT9Q9Y305 439 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 PCM1Q15154 2024 aa7.88□□□□□ -1.15
PCDH9-205ENST00000614931 PCNX2A6NKB5 2137 aa7.87□□□□□ -1.15
PCDH9-205ENST00000614931 SPTY2D1-AS1A0A0U1RR47 76 aa7.87□□□□□ -1.15
PCDH9-205ENST00000614931 FAM221BA6H8Z2 402 aa7.87□□□□□ -1.15
PCDH9-205ENST00000614931 KRT87PA6NCN2 255 aa7.87□□□□□ -1.15
PCDH9-205ENST00000614931 TARM1B6A8C7 271 aa7.87□□□□□ -1.15
PCDH9-205ENST00000614931 TK2O00142 265 aa7.87□□□□□ -1.15
PCDH9-205ENST00000614931 PCDHGA12O60330 932 aa7.87□□□□□ -1.15
PCDH9-205ENST00000614931 DFNA5O60443 496 aa7.87□□□□□ -1.15
PCDH9-205ENST00000614931 PLIN3O60664 434 aa7.87□□□□□ -1.15
PCDH9-205ENST00000614931 POP7O75817 140 aaKnown RBP7.87□□□□□ -1.15
PCDH9-205ENST00000614931 KLHL2O95198 593 aa7.87□□□□□ -1.15
PCDH9-205ENST00000614931 FTH1P02794 183 aa7.87□□□□□ -1.15
PCDH9-205ENST00000614931 GSTA1P08263 222 aa7.87□□□□□ -1.15
PCDH9-205ENST00000614931 LTA4HP09960 611 aaKnown RBP7.87□□□□□ -1.15
PCDH9-205ENST00000614931 DHRS4L1P0CG22 281 aa7.87□□□□□ -1.15
PCDH9-205ENST00000614931 ACP5P13686 325 aa7.87□□□□□ -1.15
PCDH9-205ENST00000614931 CHN1P15882 459 aa7.87□□□□□ -1.15
PCDH9-205ENST00000614931 TFEBP19484 476 aa7.87□□□□□ -1.15
PCDH9-205ENST00000614931 SPINK2P20155 84 aa7.87□□□□□ -1.15
PCDH9-205ENST00000614931 PDHA2P29803 388 aa7.87□□□□□ -1.15
PCDH9-205ENST00000614931 CRHR1P34998 444 aa7.87□□□□□ -1.15
PCDH9-205ENST00000614931 RABIFP47224 123 aa7.87□□□□□ -1.15
PCDH9-205ENST00000614931 GLRBP48167 497 aa7.87□□□□□ -1.15
PCDH9-205ENST00000614931 KCNC1P48547 511 aa7.87□□□□□ -1.15
PCDH9-205ENST00000614931 YPEL5P62699 121 aa7.87□□□□□ -1.15
PCDH9-205ENST00000614931 GPS2Q13227 327 aa7.87□□□□□ -1.15
PCDH9-205ENST00000614931 TCEA2Q15560 299 aa7.87□□□□□ -1.15
PCDH9-205ENST00000614931 TSNQ15631 228 aaKnown RBP7.87□□□□□ -1.15
PCDH9-205ENST00000614931 ZNF542PQ5EBM4 170 aa7.87□□□□□ -1.15
PCDH9-205ENST00000614931 PLEKHS1Q5SXH7 462 aa7.87□□□□□ -1.15
PCDH9-205ENST00000614931 CES4AQ5XG92 561 aa7.87□□□□□ -1.15
PCDH9-205ENST00000614931 LRRC8EQ6NSJ5 796 aa7.87□□□□□ -1.15
PCDH9-205ENST00000614931 RAB44Q7Z6P3 723 aaPredicted RBP7.87□□□□□ -1.15
PCDH9-205ENST00000614931 RASGRP3Q8IV61 690 aa7.87□□□□□ -1.15
PCDH9-205ENST00000614931 FSTL5Q8N475 847 aaPredicted RBP7.87□□□□□ -1.15
PCDH9-205ENST00000614931 OR56A4Q8NGH8 313 aa7.87□□□□□ -1.15
PCDH9-205ENST00000614931 OR2L2Q8NH16 312 aa7.87□□□□□ -1.15
PCDH9-205ENST00000614931 CCL4L1Q8NHW4 92 aa7.87□□□□□ -1.15
PCDH9-205ENST00000614931 BAHD1Q8TBE0 780 aaPredicted RBP7.87□□□□□ -1.15
PCDH9-205ENST00000614931 HM13Q8TCT9 377 aa7.87□□□□□ -1.15
PCDH9-205ENST00000614931 MGARPQ8TDB4 240 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms