RNA–Protein interactions for RNA: ENST00000613947.1

CCL4-201, Transcript of C-C motif chemokine ligand 4, humanhuman

Gene CCL4, Length 1,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-201ENST00000613947 MSH3P20585 1137 aa12.64□□□□□ -0.39
CCL4-201ENST00000613947 ACRV1P26436 265 aa12.64□□□□□ -0.39
CCL4-201ENST00000613947 NOVA1P51513 510 aaKnown RBP12.64□□□□□ -0.39
CCL4-201ENST00000613947 OCRLQ01968 901 aa12.64□□□□□ -0.39
CCL4-201ENST00000613947 MGAT5Q09328 741 aa12.64□□□□□ -0.39
CCL4-201ENST00000613947 TRIP6Q15654 476 aaKnown RBP12.64□□□□□ -0.39
CCL4-201ENST00000613947 SMAD1Q15797 465 aaKnown RBP12.64□□□□□ -0.39
CCL4-201ENST00000613947 DBN1Q16643 649 aa12.64□□□□□ -0.39
CCL4-201ENST00000613947 BBS9Q3SYG4 887 aa12.64□□□□□ -0.39
CCL4-201ENST00000613947 ANKRD20A4Q4UJ75 823 aa12.64□□□□□ -0.39
CCL4-201ENST00000613947 ARMC3Q5W041 872 aa12.64□□□□□ -0.39
CCL4-201ENST00000613947 LVRNQ6Q4G3 990 aa12.64□□□□□ -0.39
CCL4-201ENST00000613947 TMEM220Q6QAJ8 160 aa12.64□□□□□ -0.39
CCL4-201ENST00000613947 DET1Q7L5Y6 550 aa12.64□□□□□ -0.39
CCL4-201ENST00000613947 TMEM135Q86UB9 458 aa12.64□□□□□ -0.39
CCL4-201ENST00000613947 LRRTM4Q86VH4 590 aa12.64□□□□□ -0.39
CCL4-201ENST00000613947 TRAPPC5Q8IUR0 188 aa12.64□□□□□ -0.39
CCL4-201ENST00000613947 IGDCC3Q8IVU1 814 aa12.64□□□□□ -0.39
CCL4-201ENST00000613947 BBOF1Q8ND07 529 aa12.64□□□□□ -0.39
CCL4-201ENST00000613947 FAM13CQ8NE31 585 aa12.64□□□□□ -0.39
CCL4-201ENST00000613947 FAM46DQ8NEK8 389 aa12.64□□□□□ -0.39
CCL4-201ENST00000613947 SCG3Q8WXD2 468 aaKnown RBP12.64□□□□□ -0.39
CCL4-201ENST00000613947 DNAJC9Q8WXX5 260 aa12.64□□□□□ -0.39
CCL4-201ENST00000613947 FAM136AQ96C01 138 aa12.64□□□□□ -0.39
CCL4-201ENST00000613947 BOCQ9BWV1 1114 aa12.64□□□□□ -0.39
CCL4-201ENST00000613947 GSDMCQ9BYG8 508 aa12.64□□□□□ -0.39
CCL4-201ENST00000613947 FOXP3Q9BZS1 431 aa12.64□□□□□ -0.39
CCL4-201ENST00000613947 CDC42EP4Q9H3Q1 356 aaKnown RBP12.64□□□□□ -0.39
CCL4-201ENST00000613947 ZDHHC3Q9NYG2 299 aa12.64□□□□□ -0.39
CCL4-201ENST00000613947 STOML1Q9UBI4 398 aa12.64□□□□□ -0.39
CCL4-201ENST00000613947 SLC23A2Q9UGH3 650 aa12.64□□□□□ -0.39
CCL4-201ENST00000613947 LRCH1Q9Y2L9 728 aa12.64□□□□□ -0.39
CCL4-201ENST00000613947 RPS6KL1Q9Y6S9 549 aa12.64□□□□□ -0.39
CCL4-201ENST00000613947 RP1P56715 2156 aa12.63□□□□□ -0.39
CCL4-201ENST00000613947 IGLV3-16A0A075B6K0 115 aa12.63□□□□□ -0.39
CCL4-201ENST00000613947 CDH16O75309 829 aa12.63□□□□□ -0.39
CCL4-201ENST00000613947 LDOC1O95751 146 aaPredicted RBP12.63□□□□□ -0.39
CCL4-201ENST00000613947 ACTR1BP42025 376 aa12.63□□□□□ -0.39
CCL4-201ENST00000613947 SLCO1A2P46721 670 aa12.63□□□□□ -0.39
CCL4-201ENST00000613947 ARCN1P48444 511 aaKnown RBP12.63□□□□□ -0.39
CCL4-201ENST00000613947 ACTR1AP61163 376 aa12.63□□□□□ -0.39
CCL4-201ENST00000613947 GTF2H3Q13889 308 aa12.63□□□□□ -0.39
CCL4-201ENST00000613947 LRP8Q14114 963 aa12.63□□□□□ -0.39
CCL4-201ENST00000613947 SEMA3AQ14563 771 aa12.63□□□□□ -0.39
CCL4-201ENST00000613947 HIF1AQ16665 826 aa12.63□□□□□ -0.39
CCL4-201ENST00000613947 PROX2Q3B8N5 592 aa12.63□□□□□ -0.39
CCL4-201ENST00000613947 PLA2G4EQ3MJ16 856 aa12.63□□□□□ -0.39
CCL4-201ENST00000613947 FASTKD1Q53R41 847 aaKnown RBP12.63□□□□□ -0.39
CCL4-201ENST00000613947 HP1BP3Q5SSJ5 553 aaPredicted RBP12.63□□□□□ -0.39
CCL4-201ENST00000613947 C11orf96Q7Z7L8 435 aa12.63□□□□□ -0.39
CCL4-201ENST00000613947 LDB1Q86U70 411 aaPredicted RBP12.63□□□□□ -0.39
CCL4-201ENST00000613947 SFTPA2Q8IWL1 248 aa12.63□□□□□ -0.39
CCL4-201ENST00000613947 BEND7Q8N7W2 519 aaPredicted RBP12.63□□□□□ -0.39
CCL4-201ENST00000613947 ZNF669Q96BR6 464 aaPredicted RBP12.63□□□□□ -0.39
CCL4-201ENST00000613947 DCUN1D1Q96GG9 259 aa12.63□□□□□ -0.39
CCL4-201ENST00000613947 CNDP2Q96KP4 475 aaKnown RBP12.63□□□□□ -0.39
CCL4-201ENST00000613947 APOLD1Q96LR9 279 aa12.63□□□□□ -0.39
CCL4-201ENST00000613947 CDC6Q99741 560 aa12.63□□□□□ -0.39
CCL4-201ENST00000613947 EBNA1BP2Q99848 306 aaKnown RBP12.63□□□□□ -0.39
CCL4-201ENST00000613947 CCDC77Q9BR77 488 aa12.63□□□□□ -0.39
CCL4-201ENST00000613947 FAM167BQ9BTA0 163 aa12.63□□□□□ -0.39
CCL4-201ENST00000613947 PITPNM3Q9BZ71 974 aa12.63□□□□□ -0.39
CCL4-201ENST00000613947 DPEP2Q9H4A9 486 aa12.63□□□□□ -0.39
CCL4-201ENST00000613947 IL1RAPL1Q9NZN1 696 aa12.63□□□□□ -0.39
CCL4-201ENST00000613947 TAAR2Q9P1P5 351 aa12.63□□□□□ -0.39
CCL4-201ENST00000613947 MARCH4Q9P2E8 410 aaPredicted RBP12.63□□□□□ -0.39
CCL4-201ENST00000613947 NKX1-2Q9UD57 310 aaPredicted RBP12.63□□□□□ -0.39
CCL4-201ENST00000613947 FTSJ1Q9UET6 329 aa12.63□□□□□ -0.39
CCL4-201ENST00000613947 GPR34Q9UPC5 381 aa12.63□□□□□ -0.39
CCL4-201ENST00000613947 KCNK6Q9Y257 313 aa12.63□□□□□ -0.39
CCL4-201ENST00000613947 LY6G6EA0A0G2JKS1 128 aa12.62□□□□□ -0.39
CCL4-201ENST00000613947 ZCWPW2A0A1B0GU75 182 aa12.62□□□□□ -0.39
CCL4-201ENST00000613947 SPAARA0A1B0GVQ0 90 aa12.62□□□□□ -0.39
CCL4-201ENST00000613947 KMOO15229 486 aa12.62□□□□□ -0.39
CCL4-201ENST00000613947 CD3EAPO15446 510 aaKnown RBP12.62□□□□□ -0.39
CCL4-201ENST00000613947 SGTAO43765 313 aa12.62□□□□□ -0.39
CCL4-201ENST00000613947 ABHD2P08910 425 aa12.62□□□□□ -0.39
CCL4-201ENST00000613947 RALBP11234 206 aa12.62□□□□□ -0.39
CCL4-201ENST00000613947 ATP1B2P14415 290 aaPredicted RBP12.62□□□□□ -0.39
CCL4-201ENST00000613947 VHLP40337 213 aa12.62□□□□□ -0.39
CCL4-201ENST00000613947 ARL4CP56559 192 aa12.62□□□□□ -0.39
CCL4-201ENST00000613947 DNAJC3Q13217 504 aa12.62□□□□□ -0.39
CCL4-201ENST00000613947 C6orf132Q5T0Z8 1188 aa12.62□□□□□ -0.39
CCL4-201ENST00000613947 KIAA0930Q6ICG6 404 aaPredicted RBP12.62□□□□□ -0.39
CCL4-201ENST00000613947 ZCCHC8Q6NZY4 707 aaKnown RBP12.62□□□□□ -0.39
CCL4-201ENST00000613947 CLDN19Q8N6F1 224 aa12.62□□□□□ -0.39
CCL4-201ENST00000613947 FAM181AQ8N9Y4 354 aa12.62□□□□□ -0.39
CCL4-201ENST00000613947 HEXDCQ8WVB3 486 aa12.62□□□□□ -0.39
CCL4-201ENST00000613947 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.62□□□□□ -0.39
CCL4-201ENST00000613947 WDR83Q9BRX9 315 aaKnown RBP12.62□□□□□ -0.39
CCL4-201ENST00000613947 MYLK2Q9H1R3 596 aa12.62□□□□□ -0.39
CCL4-201ENST00000613947 CATSPERZQ9NTU4 200 aa12.62□□□□□ -0.39
CCL4-201ENST00000613947 SIRPGQ9P1W8 387 aa12.62□□□□□ -0.39
CCL4-201ENST00000613947 U3KQA8 63 aa12.62□□□□□ -0.39
CCL4-201ENST00000613947 WDFY3Q8IZQ1 3526 aa12.61□□□□□ -0.39
CCL4-201ENST00000613947 CFAP99D6REC4 459 aa12.61□□□□□ -0.39
CCL4-201ENST00000613947 NDC80O14777 642 aa12.61□□□□□ -0.39
CCL4-201ENST00000613947 PRPF4O43172 522 aaKnown RBP eCLIP12.61□□□□□ -0.39
CCL4-201ENST00000613947 TNFSF14O43557 240 aa12.61□□□□□ -0.39
CCL4-201ENST00000613947 OR1I1O60431 355 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms