RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 WARS2Q9UGM6 360 aaKnown RBP16.23■□□□□ 0.19
CNOT3-208ENST00000613073 PTBP2Q9UKA9 531 aaKnown RBP16.23■□□□□ 0.19
CNOT3-208ENST00000613073 TRAF6Q9Y4K3 522 aa16.23■□□□□ 0.19
CNOT3-208ENST00000613073 GOLGA8CPA6NN73 597 aa16.23■□□□□ 0.19
CNOT3-208ENST00000613073 IQCF5A8MTL0 148 aa16.23■□□□□ 0.19
CNOT3-208ENST00000613073 MTHFD2P13995 350 aa16.23■□□□□ 0.19
CNOT3-208ENST00000613073 ELK4P28324 431 aa16.23■□□□□ 0.19
CNOT3-208ENST00000613073 SUOXP51687 545 aa16.23■□□□□ 0.19
CNOT3-208ENST00000613073 HERVK_113P63132 956 aa16.23■□□□□ 0.19
CNOT3-208ENST00000613073 GEN1Q17RS7 908 aa16.23■□□□□ 0.19
CNOT3-208ENST00000613073 ZNF783Q6ZMS7 281 aa16.23■□□□□ 0.19
CNOT3-208ENST00000613073 SPPL2CQ8IUH8 684 aa16.23■□□□□ 0.19
CNOT3-208ENST00000613073 ADAMTS16Q8TE57 1224 aa16.23■□□□□ 0.19
CNOT3-208ENST00000613073 CLIP3Q96DZ5 547 aa16.23■□□□□ 0.19
CNOT3-208ENST00000613073 CSF3RQ99062 836 aa16.23■□□□□ 0.19
CNOT3-208ENST00000613073 HGH1Q9BTY7 390 aa16.23■□□□□ 0.19
CNOT3-208ENST00000613073 ERVK-6Q9BXR3 956 aa16.23■□□□□ 0.19
CNOT3-208ENST00000613073 C11orf49Q9H6J7 331 aa16.23■□□□□ 0.19
CNOT3-208ENST00000613073 PALMDQ9NP74 551 aa16.23■□□□□ 0.19
CNOT3-208ENST00000613073 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.23■□□□□ 0.19
CNOT3-208ENST00000613073 V9GYQ6 96 aa16.23■□□□□ 0.19
CNOT3-208ENST00000613073 MYOFQ9NZM1 2061 aa16.23■□□□□ 0.19
CNOT3-208ENST00000613073 SUPT3HB4E1H0 165 aa16.22■□□□□ 0.19
CNOT3-208ENST00000613073 CDC7O00311 574 aa16.22■□□□□ 0.19
CNOT3-208ENST00000613073 CCL16O15467 120 aa16.22■□□□□ 0.19
CNOT3-208ENST00000613073 CD70P32970 193 aa16.22■□□□□ 0.19
CNOT3-208ENST00000613073 PPM1AP35813 382 aa16.22■□□□□ 0.19
CNOT3-208ENST00000613073 SEMG2Q02383 582 aa16.22■□□□□ 0.19
CNOT3-208ENST00000613073 TSNQ15631 228 aaKnown RBP16.22■□□□□ 0.19
CNOT3-208ENST00000613073 INAQ16352 499 aa16.22■□□□□ 0.19
CNOT3-208ENST00000613073 ABRAXAS1Q6UWZ7 409 aa16.22■□□□□ 0.19
CNOT3-208ENST00000613073 ERMP1Q7Z2K6 904 aa16.22■□□□□ 0.19
CNOT3-208ENST00000613073 TTC30BQ8N4P2 665 aa16.22■□□□□ 0.19
CNOT3-208ENST00000613073 MAGEE2Q8TD90 523 aaPredicted RBP16.22■□□□□ 0.19
CNOT3-208ENST00000613073 SPAG4Q9NPE6 437 aa16.22■□□□□ 0.19
CNOT3-208ENST00000613073 HCFC1R1Q9NWW0 138 aa16.22■□□□□ 0.19
CNOT3-208ENST00000613073 RNF112Q9ULX5 631 aa16.22■□□□□ 0.19
CNOT3-208ENST00000613073 SLC30A1Q9Y6M5 507 aa16.22■□□□□ 0.19
CNOT3-208ENST00000613073 LTBP2Q14767 1821 aa16.22■□□□□ 0.19
CNOT3-208ENST00000613073 OBSL1O75147 1896 aa16.22■□□□□ 0.19
CNOT3-208ENST00000613073 GFRA2O00451 464 aa16.22■□□□□ 0.19
CNOT3-208ENST00000613073 CTSAP10619 480 aa16.22■□□□□ 0.19
CNOT3-208ENST00000613073 SH3BP2P78314 561 aa16.22■□□□□ 0.19
CNOT3-208ENST00000613073 TMC8Q8IU68 726 aa16.22■□□□□ 0.19
CNOT3-208ENST00000613073 ANKFN1Q8N957 763 aa16.22■□□□□ 0.19
CNOT3-208ENST00000613073 DCAF4L2Q8NA75 395 aa16.22■□□□□ 0.19
CNOT3-208ENST00000613073 ABHD11Q8NFV4 315 aa16.22■□□□□ 0.19
CNOT3-208ENST00000613073 SNX19Q92543 992 aa16.22■□□□□ 0.19
CNOT3-208ENST00000613073 MAELQ96JY0 434 aaKnown RBP16.22■□□□□ 0.19
CNOT3-208ENST00000613073 ATOH8Q96SQ7 321 aa16.22■□□□□ 0.19
CNOT3-208ENST00000613073 C2orf49Q9BVC5 232 aaPredicted RBP16.22■□□□□ 0.19
CNOT3-208ENST00000613073 KLQ9UEF7 1012 aa16.22■□□□□ 0.19
CNOT3-208ENST00000613073 C9JVG2 144 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 TRIM24O15164 1050 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 LATS1O95835 1130 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 CHRM3P20309 590 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 IFITM3Q01628 133 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 LMAN2Q12907 356 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 ZIK1Q3SY52 487 aaPredicted RBP16.21■□□□□ 0.19
CNOT3-208ENST00000613073 SLC36A3Q495N2 470 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 ARMC12Q5T9G4 340 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 PRR23BQ6ZRT6 265 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 CLIP4Q8N3C7 705 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 HMGCLL1Q8TB92 370 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 L3HYPDHQ96EM0 354 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 SYTL2Q9HCH5 934 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 IFT80Q9P2H3 777 aaPredicted RBP16.21■□□□□ 0.19
CNOT3-208ENST00000613073 PKP3Q9Y446 797 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 PTGDR2Q9Y5Y4 395 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 NPEPPSL1A6NEC2 478 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 BTN3A1O00481 513 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 PKMP14618 531 aaKnown RBP16.21■□□□□ 0.19
CNOT3-208ENST00000613073 HOXB8P17481 243 aaPredicted RBP16.21■□□□□ 0.19
CNOT3-208ENST00000613073 TTKP33981 857 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 NR4A2P43354 598 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 RAD51Q06609 339 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 FASTKQ14296 549 aaKnown RBP16.21■□□□□ 0.19
CNOT3-208ENST00000613073 HERC3Q15034 1050 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 INAVAQ3KP66 663 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 CTSL3PQ5NE16 218 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 RETSATQ6NUM9 610 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 CMTM8Q8IZV2 173 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 AFAP1L2Q8N4X5 818 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 MYO19Q96H55 970 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 LRCH3Q96II8 777 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 SLC46A2Q9BY10 475 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 LRRC3Q9BY71 257 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 CEP44Q9C0F1 390 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 RAD21L1Q9H4I0 556 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 POPDC3Q9HBV1 291 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 MID1IP1Q9NPA3 183 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 TLR9Q9NR96 1032 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 CCL26Q9Y258 94 aa16.21■□□□□ 0.19
CNOT3-208ENST00000613073 MRASO14807 208 aa16.21■□□□□ 0.18
CNOT3-208ENST00000613073 FZD6O60353 706 aa16.21■□□□□ 0.18
CNOT3-208ENST00000613073 JRKO75564 520 aa16.21■□□□□ 0.18
CNOT3-208ENST00000613073 OXTRP30559 389 aa16.21■□□□□ 0.18
CNOT3-208ENST00000613073 CTSOP43234 321 aaPredicted RBP16.21■□□□□ 0.18
CNOT3-208ENST00000613073 TTPAP49638 278 aa16.21■□□□□ 0.18
CNOT3-208ENST00000613073 FOXA1P55317 472 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms