RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 SYVN1Q86TM6 617 aa17.31■□□□□ 0.36
SSBP1-215ENST00000612337 TMEM126BQ8IUX1 230 aa17.31■□□□□ 0.36
SSBP1-215ENST00000612337 CFAP206Q8IYR0 622 aa17.31■□□□□ 0.36
SSBP1-215ENST00000612337 NXPE1Q8N323 547 aa17.31■□□□□ 0.36
SSBP1-215ENST00000612337 LILRA3Q8N6C8 439 aaPredicted RBP17.31■□□□□ 0.36
SSBP1-215ENST00000612337 TEX19Q8NA77 164 aa17.31■□□□□ 0.36
SSBP1-215ENST00000612337 OR13C4Q8NGS5 318 aa17.31■□□□□ 0.36
SSBP1-215ENST00000612337 HEXDCQ8WVB3 486 aa17.31■□□□□ 0.36
SSBP1-215ENST00000612337 THAP4Q8WY91 577 aa17.31■□□□□ 0.36
SSBP1-215ENST00000612337 ZNF501Q96CX3 271 aaPredicted RBP17.31■□□□□ 0.36
SSBP1-215ENST00000612337 SPATA13Q96N96 652 aa17.31■□□□□ 0.36
SSBP1-215ENST00000612337 PPP1R2P1Q96PQ5 205 aa17.31■□□□□ 0.36
SSBP1-215ENST00000612337 OSBPL8Q9BZF1 889 aa17.31■□□□□ 0.36
SSBP1-215ENST00000612337 LATS2Q9NRM7 1088 aa17.31■□□□□ 0.36
SSBP1-215ENST00000612337 KCND1Q9NSA2 647 aa17.31■□□□□ 0.36
SSBP1-215ENST00000612337 C17orf113A0A1B0GUU1 675 aa17.3■□□□□ 0.36
SSBP1-215ENST00000612337 CFAP99D6REC4 459 aa17.3■□□□□ 0.36
SSBP1-215ENST00000612337 MATN2O00339 956 aa17.3■□□□□ 0.36
SSBP1-215ENST00000612337 KCNN4O15554 427 aa17.3■□□□□ 0.36
SSBP1-215ENST00000612337 POLR2CP19387 275 aaPredicted RBP17.3■□□□□ 0.36
SSBP1-215ENST00000612337 ITGALP20701 1170 aa17.3■□□□□ 0.36
SSBP1-215ENST00000612337 CTNNA2P26232 953 aa17.3■□□□□ 0.36
SSBP1-215ENST00000612337 HADHAP40939 763 aa17.3■□□□□ 0.36
SSBP1-215ENST00000612337 ARCN1P48444 511 aaKnown RBP17.3■□□□□ 0.36
SSBP1-215ENST00000612337 EIF3EP60228 445 aaKnown RBP17.3■□□□□ 0.36
SSBP1-215ENST00000612337 RPS18P62269 152 aaKnown RBP17.3■□□□□ 0.36
SSBP1-215ENST00000612337 PRKAA1Q13131 559 aa17.3■□□□□ 0.36
SSBP1-215ENST00000612337 LAMB3Q13751 1172 aa17.3■□□□□ 0.36
SSBP1-215ENST00000612337 KRT33BQ14525 404 aa17.3■□□□□ 0.36
SSBP1-215ENST00000612337 GPR19Q15760 415 aa17.3■□□□□ 0.36
SSBP1-215ENST00000612337 DENND5AQ6IQ26 1287 aa17.3■□□□□ 0.36
SSBP1-215ENST00000612337 DARS2Q6PI48 645 aaKnown RBP17.3■□□□□ 0.36
SSBP1-215ENST00000612337 ZNF517Q6ZMY9 492 aaPredicted RBP17.3■□□□□ 0.36
SSBP1-215ENST00000612337 SNX20Q7Z614 316 aa17.3■□□□□ 0.36
SSBP1-215ENST00000612337 ACVR1CQ8NER5 493 aa17.3■□□□□ 0.36
SSBP1-215ENST00000612337 CCDC110Q8TBZ0 833 aa17.3■□□□□ 0.36
SSBP1-215ENST00000612337 MIB2Q96AX9 1013 aa17.3■□□□□ 0.36
SSBP1-215ENST00000612337 PPM1MQ96MI6 270 aa17.3■□□□□ 0.36
SSBP1-215ENST00000612337 COPS8Q99627 209 aa17.3■□□□□ 0.36
SSBP1-215ENST00000612337 TBL1YQ9BQ87 522 aa17.3■□□□□ 0.36
SSBP1-215ENST00000612337 TRIM5Q9C035 493 aa17.3■□□□□ 0.36
SSBP1-215ENST00000612337 C1GALT1Q9NS00 363 aa17.3■□□□□ 0.36
SSBP1-215ENST00000612337 SOHLH2Q9NX45 425 aa17.3■□□□□ 0.36
SSBP1-215ENST00000612337 ANKMY1Q9P2S6 941 aa17.3■□□□□ 0.36
SSBP1-215ENST00000612337 FEZ2Q9UHY8 353 aaPredicted RBP17.3■□□□□ 0.36
SSBP1-215ENST00000612337 POMT2Q9UKY4 750 aa17.3■□□□□ 0.36
SSBP1-215ENST00000612337 PLAAQ9Y263 795 aa17.3■□□□□ 0.36
SSBP1-215ENST00000612337 FARSAQ9Y285 508 aaKnown RBP17.3■□□□□ 0.36
SSBP1-215ENST00000612337 SPTBP11277 2137 aa17.3■□□□□ 0.36
SSBP1-215ENST00000612337 CLEC18AA5D8T8 446 aa17.29■□□□□ 0.36
SSBP1-215ENST00000612337 ATP1B2P14415 290 aaPredicted RBP17.29■□□□□ 0.36
SSBP1-215ENST00000612337 CD97P48960 835 aa17.29■□□□□ 0.36
SSBP1-215ENST00000612337 TMPRSS15P98073 1019 aa17.29■□□□□ 0.36
SSBP1-215ENST00000612337 GPS2Q13227 327 aa17.29■□□□□ 0.36
SSBP1-215ENST00000612337 FBXO38Q6PIJ6 1188 aa17.29■□□□□ 0.36
SSBP1-215ENST00000612337 CLEC18BQ6UXF7 455 aa17.29■□□□□ 0.36
SSBP1-215ENST00000612337 KLHDC8BQ8IXV7 354 aa17.29■□□□□ 0.36
SSBP1-215ENST00000612337 CLEC18CQ8NCF0 446 aa17.29■□□□□ 0.36
SSBP1-215ENST00000612337 OR4E2Q8NGC2 313 aa17.29■□□□□ 0.36
SSBP1-215ENST00000612337 MR1Q95460 341 aa17.29■□□□□ 0.36
SSBP1-215ENST00000612337 LRFN5Q96NI6 719 aa17.29■□□□□ 0.36
SSBP1-215ENST00000612337 FAM118BQ9BPY3 351 aa17.29■□□□□ 0.36
SSBP1-215ENST00000612337 TRIM55Q9BYV6 548 aa17.29■□□□□ 0.36
SSBP1-215ENST00000612337 FAM96AQ9H5X1 160 aa17.29■□□□□ 0.36
SSBP1-215ENST00000612337 FANCEQ9HB96 536 aa17.29■□□□□ 0.36
SSBP1-215ENST00000612337 ARNT2Q9HBZ2 717 aa17.29■□□□□ 0.36
SSBP1-215ENST00000612337 SEC16AO15027 2179 aa17.28■□□□□ 0.36
SSBP1-215ENST00000612337 IGLV3-16A0A075B6K0 115 aa17.28■□□□□ 0.36
SSBP1-215ENST00000612337 CCDC66A2RUB6 948 aa17.28■□□□□ 0.36
SSBP1-215ENST00000612337 RCCD1A6NED2 376 aa17.28■□□□□ 0.36
SSBP1-215ENST00000612337 SLC9B1P1A6NJY1 282 aa17.28■□□□□ 0.36
SSBP1-215ENST00000612337 LDB2O43679 373 aa17.28■□□□□ 0.36
SSBP1-215ENST00000612337 ZNF189O75820 626 aaPredicted RBP17.28■□□□□ 0.36
SSBP1-215ENST00000612337 DNAJB5O75953 348 aa17.28■□□□□ 0.36
SSBP1-215ENST00000612337 TJP3O95049 919 aa17.28■□□□□ 0.36
SSBP1-215ENST00000612337 PDGFAP04085 211 aa17.28■□□□□ 0.36
SSBP1-215ENST00000612337 CDH3P22223 829 aa17.28■□□□□ 0.36
SSBP1-215ENST00000612337 CETN2P41208 172 aa17.28■□□□□ 0.36
SSBP1-215ENST00000612337 RWDD2BP57060 319 aa17.28■□□□□ 0.36
SSBP1-215ENST00000612337 GSDMDP57764 484 aa17.28■□□□□ 0.36
SSBP1-215ENST00000612337 GPR33Q49SQ1 333 aa17.28■□□□□ 0.36
SSBP1-215ENST00000612337 IZUMO3Q5VZ72 239 aa17.28■□□□□ 0.36
SSBP1-215ENST00000612337 SLC38A9Q8NBW4 561 aa17.28■□□□□ 0.36
SSBP1-215ENST00000612337 LCN9Q8WX39 176 aa17.28■□□□□ 0.36
SSBP1-215ENST00000612337 LRRC45Q96CN5 670 aa17.28■□□□□ 0.36
SSBP1-215ENST00000612337 TLR10Q9BXR5 811 aa17.28■□□□□ 0.36
SSBP1-215ENST00000612337 OR52A5Q9H2C5 316 aa17.28■□□□□ 0.36
SSBP1-215ENST00000612337 SRMSQ9H3Y6 488 aa17.28■□□□□ 0.36
SSBP1-215ENST00000612337 COG4Q9H9E3 785 aa17.28■□□□□ 0.36
SSBP1-215ENST00000612337 SYTL2Q9HCH5 934 aa17.28■□□□□ 0.36
SSBP1-215ENST00000612337 ZDHHC3Q9NYG2 299 aa17.28■□□□□ 0.36
SSBP1-215ENST00000612337 EPN1Q9Y6I3 576 aaPredicted RBP17.28■□□□□ 0.36
SSBP1-215ENST00000612337 SPTAN1Q13813 2472 aaKnown RBP17.28■□□□□ 0.36
SSBP1-215ENST00000612337 MED13Q9UHV7 2174 aa17.28■□□□□ 0.36
SSBP1-215ENST00000612337 TRBV5-4A0A0C4DH59 114 aa17.27■□□□□ 0.36
SSBP1-215ENST00000612337 KLK3P07288 261 aaPredicted RBP17.27■□□□□ 0.36
SSBP1-215ENST00000612337 MC4RP32245 332 aa17.27■□□□□ 0.36
SSBP1-215ENST00000612337 CD151P48509 253 aa17.27■□□□□ 0.36
SSBP1-215ENST00000612337 MLLT10P55197 1068 aa17.27■□□□□ 0.36
SSBP1-215ENST00000612337 IL10RAQ13651 578 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms