RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 TMEM220Q6QAJ8 160 aa17.33■□□□□ 0.36
MUC1-224ENST00000611577 CES3Q6UWW8 571 aa17.33■□□□□ 0.36
MUC1-224ENST00000611577 PDIK1LQ8N165 341 aa17.33■□□□□ 0.36
MUC1-224ENST00000611577 PATE1Q8WXA2 126 aa17.33■□□□□ 0.36
MUC1-224ENST00000611577 ART4Q93070 314 aa17.33■□□□□ 0.36
MUC1-224ENST00000611577 ZNF669Q96BR6 464 aaPredicted RBP17.33■□□□□ 0.36
MUC1-224ENST00000611577 ZNF514Q96K75 400 aaPredicted RBP17.33■□□□□ 0.36
MUC1-224ENST00000611577 ERP44Q9BS26 406 aa17.33■□□□□ 0.36
MUC1-224ENST00000611577 EPN3Q9H201 632 aa17.33■□□□□ 0.36
MUC1-224ENST00000611577 CATSPERZQ9NTU4 200 aa17.33■□□□□ 0.36
MUC1-224ENST00000611577 ANKMY1Q9P2S6 941 aa17.33■□□□□ 0.36
MUC1-224ENST00000611577 PLEKHM1Q9Y4G2 1056 aa17.33■□□□□ 0.36
MUC1-224ENST00000611577 RELNP78509 3460 aa17.33■□□□□ 0.36
MUC1-224ENST00000611577 CHUKO15111 745 aa17.32■□□□□ 0.36
MUC1-224ENST00000611577 SNX2O60749 519 aa17.32■□□□□ 0.36
MUC1-224ENST00000611577 SEC31AO94979 1220 aaKnown RBP17.32■□□□□ 0.36
MUC1-224ENST00000611577 PRSS56P0CW18 603 aa17.32■□□□□ 0.36
MUC1-224ENST00000611577 ZNF7P17097 686 aaPredicted RBP17.32■□□□□ 0.36
MUC1-224ENST00000611577 MPSTP25325 297 aa17.32■□□□□ 0.36
MUC1-224ENST00000611577 PSMA3P25788 255 aa17.32■□□□□ 0.36
MUC1-224ENST00000611577 IVDP26440 423 aa17.32■□□□□ 0.36
MUC1-224ENST00000611577 PBLDP30039 288 aaPredicted RBP17.32■□□□□ 0.36
MUC1-224ENST00000611577 CA5AP35218 305 aa17.32■□□□□ 0.36
MUC1-224ENST00000611577 RPL21P46778 160 aaKnown RBP17.32■□□□□ 0.36
MUC1-224ENST00000611577 CDKN1CP49918 316 aaPredicted RBP17.32■□□□□ 0.36
MUC1-224ENST00000611577 LIMK2P53671 638 aa17.32■□□□□ 0.36
MUC1-224ENST00000611577 ARL4CP56559 192 aa17.32■□□□□ 0.36
MUC1-224ENST00000611577 ACVR1Q04771 509 aa17.32■□□□□ 0.36
MUC1-224ENST00000611577 TRA2AQ13595 282 aaKnown RBP eCLIP17.32■□□□□ 0.36
MUC1-224ENST00000611577 BBS9Q3SYG4 887 aa17.32■□□□□ 0.36
MUC1-224ENST00000611577 FNBP1LQ5T0N5 605 aa17.32■□□□□ 0.36
MUC1-224ENST00000611577 NKAIN2Q5VXU1 208 aa17.32■□□□□ 0.36
MUC1-224ENST00000611577 HIBCHQ6NVY1 386 aaPredicted RBP17.32■□□□□ 0.36
MUC1-224ENST00000611577 CACNA2D3Q8IZS8 1091 aa17.32■□□□□ 0.36
MUC1-224ENST00000611577 RASGEF1AQ8N9B8 481 aa17.32■□□□□ 0.36
MUC1-224ENST00000611577 AGBL5Q8NDL9 886 aa17.32■□□□□ 0.36
MUC1-224ENST00000611577 MFSD3Q96ES6 412 aa17.32■□□□□ 0.36
MUC1-224ENST00000611577 STAMBPL1Q96FJ0 436 aa17.32■□□□□ 0.36
MUC1-224ENST00000611577 ZMYND15Q9H091 742 aa17.32■□□□□ 0.36
MUC1-224ENST00000611577 KLC4Q9NSK0 619 aa17.32■□□□□ 0.36
MUC1-224ENST00000611577 TREX1Q9NSU2 369 aa17.32■□□□□ 0.36
MUC1-224ENST00000611577 DNAJC16Q9Y2G8 782 aa17.32■□□□□ 0.36
MUC1-224ENST00000611577 PCYT1BQ9Y5K3 369 aaPredicted RBP17.32■□□□□ 0.36
MUC1-224ENST00000611577 B3GALT1Q9Y5Z6 326 aa17.32■□□□□ 0.36
MUC1-224ENST00000611577 RPS6KL1Q9Y6S9 549 aa17.32■□□□□ 0.36
MUC1-224ENST00000611577 NBASA2RRP1 2371 aa17.31■□□□□ 0.36
MUC1-224ENST00000611577 FAM237BA0A1B0GVD1 139 aa17.31■□□□□ 0.36
MUC1-224ENST00000611577 AGAP14A8MT82 685 aa17.31■□□□□ 0.36
MUC1-224ENST00000611577 F8W8V4 182 aa17.31■□□□□ 0.36
MUC1-224ENST00000611577 PFDN6O15212 129 aa17.31■□□□□ 0.36
MUC1-224ENST00000611577 VAPBO95292 243 aa17.31■□□□□ 0.36
MUC1-224ENST00000611577 THRAP10827 490 aa17.31■□□□□ 0.36
MUC1-224ENST00000611577 ATP1B2P14415 290 aaPredicted RBP17.31■□□□□ 0.36
MUC1-224ENST00000611577 FOXN2P32314 431 aa17.31■□□□□ 0.36
MUC1-224ENST00000611577 CSF2RBP32927 897 aa17.31■□□□□ 0.36
MUC1-224ENST00000611577 CSTF2P33240 577 aaKnown RBP eCLIP17.31■□□□□ 0.36
MUC1-224ENST00000611577 GPR3P46089 330 aa17.31■□□□□ 0.36
MUC1-224ENST00000611577 CCR10P46092 362 aa17.31■□□□□ 0.36
MUC1-224ENST00000611577 HIF1AQ16665 826 aa17.31■□□□□ 0.36
MUC1-224ENST00000611577 CERS6Q6ZMG9 384 aa17.31■□□□□ 0.36
MUC1-224ENST00000611577 CEP112Q8N8E3 955 aa17.31■□□□□ 0.36
MUC1-224ENST00000611577 OR4D9Q8NGE8 314 aa17.31■□□□□ 0.36
MUC1-224ENST00000611577 TIMM29Q9BSF4 260 aa17.31■□□□□ 0.36
MUC1-224ENST00000611577 DDA1Q9BW61 102 aa17.31■□□□□ 0.36
MUC1-224ENST00000611577 VPS37BQ9H9H4 285 aa17.31■□□□□ 0.36
MUC1-224ENST00000611577 SLC39A1Q9NY26 324 aa17.31■□□□□ 0.36
MUC1-224ENST00000611577 TRBV5-4A0A0C4DH59 114 aa17.3■□□□□ 0.36
MUC1-224ENST00000611577 CD3EAPO15446 510 aaKnown RBP17.3■□□□□ 0.36
MUC1-224ENST00000611577 RAD1O60671 282 aa17.3■□□□□ 0.36
MUC1-224ENST00000611577 POLBP06746 335 aa17.3■□□□□ 0.36
MUC1-224ENST00000611577 SLC2A4P14672 509 aa17.3■□□□□ 0.36
MUC1-224ENST00000611577 MAGEA3P43357 314 aa17.3■□□□□ 0.36
MUC1-224ENST00000611577 CTSCP53634 463 aa17.3■□□□□ 0.36
MUC1-224ENST00000611577 DHX9Q08211 1270 aaKnown RBP17.3■□□□□ 0.36
MUC1-224ENST00000611577 THOC5Q13769 683 aaKnown RBP17.3■□□□□ 0.36
MUC1-224ENST00000611577 ITIH4Q14624 930 aa17.3■□□□□ 0.36
MUC1-224ENST00000611577 DBN1Q16643 649 aa17.3■□□□□ 0.36
MUC1-224ENST00000611577 KIAA0930Q6ICG6 404 aaPredicted RBP17.3■□□□□ 0.36
MUC1-224ENST00000611577 MRNIPQ6NTE8 343 aa17.3■□□□□ 0.36
MUC1-224ENST00000611577 MICALCLQ6ZW33 695 aa17.3■□□□□ 0.36
MUC1-224ENST00000611577 SDCCAG8Q86SQ7 713 aaPredicted RBP17.3■□□□□ 0.36
MUC1-224ENST00000611577 AMZ2Q86W34 360 aa17.3■□□□□ 0.36
MUC1-224ENST00000611577 FAM129CQ86XR2 697 aa17.3■□□□□ 0.36
MUC1-224ENST00000611577 PIANPQ8IYJ0 282 aa17.3■□□□□ 0.36
MUC1-224ENST00000611577 NAGSQ8N159 534 aa17.3■□□□□ 0.36
MUC1-224ENST00000611577 KCNK4Q9NYG8 393 aa17.3■□□□□ 0.36
MUC1-224ENST00000611577 TMEM9Q9P0T7 183 aa17.3■□□□□ 0.36
MUC1-224ENST00000611577 WHRNQ9P202 907 aa17.3■□□□□ 0.36
MUC1-224ENST00000611577 FAM8A1Q9UBU6 413 aa17.3■□□□□ 0.36
MUC1-224ENST00000611577 TUBD1Q9UJT1 453 aa17.3■□□□□ 0.36
MUC1-224ENST00000611577 IGHV1OR21-1A0A087WYE8 117 aa17.29■□□□□ 0.36
MUC1-224ENST00000611577 ZNF891A8MT65 544 aaPredicted RBP17.29■□□□□ 0.36
MUC1-224ENST00000611577 PDZK1P1A8MUH7 402 aa17.29■□□□□ 0.36
MUC1-224ENST00000611577 PPM1DO15297 605 aa17.29■□□□□ 0.36
MUC1-224ENST00000611577 KCNJ13O60928 360 aa17.29■□□□□ 0.36
MUC1-224ENST00000611577 POP7O75817 140 aaKnown RBP17.29■□□□□ 0.36
MUC1-224ENST00000611577 USP1O94782 785 aa17.29■□□□□ 0.36
MUC1-224ENST00000611577 PGAM1P18669 254 aa17.29■□□□□ 0.36
MUC1-224ENST00000611577 IDSP22304 550 aa17.29■□□□□ 0.36
MUC1-224ENST00000611577 NSG1P42857 185 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms