RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 MAGEA8P43361 318 aa7.02□□□□□ -1.29
CBWD1-219ENST00000611457 MAGEA12P43365 314 aa7.02□□□□□ -1.29
CBWD1-219ENST00000611457 MARCKSL1P49006 195 aa7.02□□□□□ -1.29
CBWD1-219ENST00000611457 PXNP49023 591 aaPredicted RBP7.02□□□□□ -1.29
CBWD1-219ENST00000611457 UAP1Q16222 522 aaPredicted RBP7.02□□□□□ -1.29
CBWD1-219ENST00000611457 TSNAXIP1Q2TAA8 658 aa7.02□□□□□ -1.29
CBWD1-219ENST00000611457 CRB2Q5IJ48 1285 aa7.02□□□□□ -1.29
CBWD1-219ENST00000611457 IGFL2Q6UWQ7 119 aa7.02□□□□□ -1.29
CBWD1-219ENST00000611457 PPP1R21Q6ZMI0 780 aa7.02□□□□□ -1.29
CBWD1-219ENST00000611457 PEX26Q7Z412 305 aa7.02□□□□□ -1.29
CBWD1-219ENST00000611457 PTAR1Q7Z6K3 402 aaPredicted RBP7.02□□□□□ -1.29
CBWD1-219ENST00000611457 PRELID2Q8N945 189 aa7.02□□□□□ -1.29
CBWD1-219ENST00000611457 RHBDD1Q8TEB9 315 aa7.02□□□□□ -1.29
CBWD1-219ENST00000611457 PGM2Q96G03 612 aa7.02□□□□□ -1.29
CBWD1-219ENST00000611457 C9orf72Q96LT7 481 aa7.02□□□□□ -1.29
CBWD1-219ENST00000611457 RAB3IPQ96QF0 476 aaPredicted RBP7.02□□□□□ -1.29
CBWD1-219ENST00000611457 LGMNQ99538 433 aa7.02□□□□□ -1.29
CBWD1-219ENST00000611457 AP1M1Q9BXS5 423 aa7.02□□□□□ -1.29
CBWD1-219ENST00000611457 GPR87Q9BY21 358 aa7.02□□□□□ -1.29
CBWD1-219ENST00000611457 SHCBP1LQ9BZQ2 653 aa7.02□□□□□ -1.29
CBWD1-219ENST00000611457 RAB17Q9H0T7 212 aa7.02□□□□□ -1.29
CBWD1-219ENST00000611457 CDC42EP4Q9H3Q1 356 aaKnown RBP7.02□□□□□ -1.29
CBWD1-219ENST00000611457 WDR54Q9H977 334 aa7.02□□□□□ -1.29
CBWD1-219ENST00000611457 RDH14Q9HBH5 336 aa7.02□□□□□ -1.29
CBWD1-219ENST00000611457 WHRNQ9P202 907 aa7.02□□□□□ -1.29
CBWD1-219ENST00000611457 TMCO1Q9UM00 188 aa7.02□□□□□ -1.29
CBWD1-219ENST00000611457 PCDHB9Q9Y5E1 797 aa7.02□□□□□ -1.29
CBWD1-219ENST00000611457 GLYATL1P3A0A0U1RQE8 302 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 B4GAT1O43505 415 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 PSIP1O75475 530 aaKnown RBP7.01□□□□□ -1.29
CBWD1-219ENST00000611457 CPNE6O95741 557 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 FTH1P02794 183 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 HBQ1P09105 142 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 IMPDH2P12268 514 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 AOAHP28039 575 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 PPARGP37231 505 aaPredicted RBP7.01□□□□□ -1.29
CBWD1-219ENST00000611457 ILF3Q12906 894 aaKnown RBP eCLIP7.01□□□□□ -1.29
CBWD1-219ENST00000611457 MORF4L2Q15014 288 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 RNASEH2BQ5TBB1 312 aaKnown RBP7.01□□□□□ -1.29
CBWD1-219ENST00000611457 HES3Q5TGS1 186 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 HHATQ5VTY9 493 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 TMEM26Q6ZUK4 368 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 PDXPQ96GD0 296 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 IP6K3Q96PC2 410 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 SLC12A9Q9BXP2 914 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 TGIF2Q9GZN2 237 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 SMARCAL1Q9NZC9 954 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 TDRD6O60522 2096 aaKnown RBP7.01□□□□□ -1.29
CBWD1-219ENST00000611457 IGHV5-10-1A0A0J9YXX1 117 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 GRID2O43424 1007 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 MAP3K6O95382 1288 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 RBL1P28749 1068 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 ETV3P41162 512 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 LEPRP48357 1165 aaKnown RBP7.01□□□□□ -1.29
CBWD1-219ENST00000611457 KLC1Q07866 573 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 CLN3Q13286 438 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 KIR2DS3Q14952 304 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 SMTNL2Q2TAL5 461 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 PIGWQ7Z7B1 504 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 OR2L8Q8NGY9 312 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 ADAMTS17Q8TE56 1095 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 CCDC74AQ96AQ1 378 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 BARD1Q99728 777 aaKnown RBP7.01□□□□□ -1.29
CBWD1-219ENST00000611457 STMN4Q9H169 189 aaPredicted RBP7.01□□□□□ -1.29
CBWD1-219ENST00000611457 ITM2BQ9Y287 266 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 RPS6KL1Q9Y6S9 549 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 DPPA5A6NC42 116 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 TLCD2A6NGC4 264 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 GFYI3L273 518 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 RBP3P10745 1247 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 NELFEP18615 380 aaKnown RBP7.01□□□□□ -1.29
CBWD1-219ENST00000611457 MSH2P43246 934 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 SCNN1BP51168 640 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 ATXN3P54252 364 aaPredicted RBP7.01□□□□□ -1.29
CBWD1-219ENST00000611457 TMPRSS3P57727 454 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 NAA20P61599 178 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 MC1RQ01726 317 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 BNIP3Q12983 259 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 GRB7Q14451 532 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 SPANXN3Q5MJ09 141 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 KLHL35Q6PF15 583 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 ZNF574Q6ZN55 896 aaPredicted RBP7.01□□□□□ -1.29
CBWD1-219ENST00000611457 EFL1Q7Z2Z2 1120 aaKnown RBP7.01□□□□□ -1.29
CBWD1-219ENST00000611457 TSPAN33Q86UF1 283 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 LGI4Q8N135 537 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 PELI3Q8N2H9 469 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.01□□□□□ -1.29
CBWD1-219ENST00000611457 MS4A14Q96JA4 679 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 ELAC2Q9BQ52 826 aaKnown RBP7.01□□□□□ -1.29
CBWD1-219ENST00000611457 CCDC3Q9BQI4 270 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 SCNM1Q9BWG6 230 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 INTS9Q9NV88 658 aaKnown RBP7.01□□□□□ -1.29
CBWD1-219ENST00000611457 OR6C2Q9NZP2 312 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 PILRAQ9UKJ1 303 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 PPIEQ9UNP9 301 aaKnown RBP7.01□□□□□ -1.29
CBWD1-219ENST00000611457 STK38LQ9Y2H1 464 aa7.01□□□□□ -1.29
CBWD1-219ENST00000611457 MYO9BQ13459 2157 aa7□□□□□ -1.29
CBWD1-219ENST00000611457 BLACEA4D250 179 aa7□□□□□ -1.29
CBWD1-219ENST00000611457 NPIPB8E9PQR5 432 aa7□□□□□ -1.29
CBWD1-219ENST00000611457 PGRMC1O00264 195 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms