RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 SCAMP4Q969E2 229 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 TMEM106CQ9BVX2 250 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 MTG2Q9H4K7 406 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 RDH14Q9HBH5 336 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 CMTM6Q9NX76 183 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 ARL15Q9NXU5 204 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 ZIM2Q9NZV7 527 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 EGFL7Q9UHF1 273 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 TMPRSS11EQ9UL52 423 aa13.37□□□□□ -0.27
NEK3-205ENST00000610828 IGLV3-16A0A075B6K0 115 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 TCRBV3S1A0A5B6 114 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 EEDO75530 441 aaKnown RBP13.36□□□□□ -0.27
NEK3-205ENST00000610828 ANXA5P08758 320 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 G6PDP11413 515 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 EPB42P16452 691 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 CEBPBP17676 345 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 IL12AP29459 219 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 BOP1Q14137 746 aaKnown RBP13.36□□□□□ -0.27
NEK3-205ENST00000610828 POM121L1PQ3SYA9 428 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 TMEM102Q8N9M5 508 aaPredicted RBP13.36□□□□□ -0.27
NEK3-205ENST00000610828 LEMD2Q8NC56 503 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 CATSPER1Q8NEC5 780 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 ADCY4Q8NFM4 1077 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 BTBD9Q96Q07 612 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 SEMA6AQ9H2E6 1030 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 LEF1Q9UJU2 399 aaPredicted RBP13.36□□□□□ -0.27
NEK3-205ENST00000610828 FAM234BA2RU67 622 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 LINC01553A4QN01 128 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 STK16O75716 305 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 CYP2A6P11509 494 aaPredicted RBP13.36□□□□□ -0.27
NEK3-205ENST00000610828 ATP1B2P14415 290 aaPredicted RBP13.36□□□□□ -0.27
NEK3-205ENST00000610828 ZNF30P17039 623 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 ATP6V1B2P21281 511 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 HOXA9P31269 272 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 EMX2Q04743 252 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 FOXM1Q08050 763 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 PRKG2Q13237 762 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 CAMK1Q14012 370 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 RFTN2Q52LD8 501 aaPredicted RBP13.36□□□□□ -0.27
NEK3-205ENST00000610828 UBE2R2Q712K3 238 aaPredicted RBP13.36□□□□□ -0.27
NEK3-205ENST00000610828 HSD11B1LQ7Z5J1 315 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 GALNT4Q8N4A0 578 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 ZNF366Q8N895 744 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 FRS2Q8WU20 508 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 LRTOMTQ8WZ04 291 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 SLCO4A1Q96BD0 722 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 MRGPRX3Q96LB0 322 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 TRIM54Q9BYV2 358 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 HEBP1Q9NRV9 189 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 FARSBQ9NSD9 589 aaKnown RBP13.36□□□□□ -0.27
NEK3-205ENST00000610828 SLAMF8Q9P0V8 285 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 KLQ9UEF7 1012 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 RNF11Q9Y3C5 154 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 POLR3HQ9Y535 204 aaPredicted RBP13.36□□□□□ -0.27
NEK3-205ENST00000610828 SNX13Q9Y5W8 968 aa13.36□□□□□ -0.27
NEK3-205ENST00000610828 CHD9Q3L8U1 2897 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 ZNF839A8K0R7 811 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 HNRNPA1P09651 372 aaKnown RBP eCLIP13.35□□□□□ -0.27
NEK3-205ENST00000610828 HSD17B1P14061 328 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 AOAHP28039 575 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 SLC7A1P30825 629 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 VIPR1P32241 457 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 ETV3P41162 512 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 RABL3Q5HYI8 236 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 FBXL19Q6PCT2 694 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 PSRC1Q6PGN9 363 aaPredicted RBP13.35□□□□□ -0.27
NEK3-205ENST00000610828 CYP20A1Q6UW02 462 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 Q6ZVL8 140 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 RBM23Q86U06 439 aaKnown RBP13.35□□□□□ -0.27
NEK3-205ENST00000610828 IFNEQ86WN2 208 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 PLPP6Q8IY26 295 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 OR2T34Q8NGX1 318 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 OR2T3Q8NH03 318 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 UBTD2Q8WUN7 234 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 OTUB2Q96DC9 234 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 FAM83DQ9H4H8 585 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 PCDH12Q9NPG4 1184 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 KLHL42Q9P2K6 505 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 SLC8A2Q9UPR5 921 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 PDE10AQ9Y233 779 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 PCDHA9Q9Y5H5 950 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 LOC730098B7Z3J9 87 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 ULK1O75385 1050 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 SLC2A4P14672 509 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 PAX7P23759 505 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 RPL38P63173 70 aaKnown RBP13.35□□□□□ -0.27
NEK3-205ENST00000610828 SGO1Q5FBB7 561 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 SERPINA13PQ6UXR4 307 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 KIAA0907Q7Z7F0 614 aaPredicted RBP13.35□□□□□ -0.27
NEK3-205ENST00000610828 ZFAND4Q86XD8 727 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 TICAM1Q8IUC6 712 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 VRK3Q8IV63 474 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 CANT1Q8WVQ1 401 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 EME1Q96AY2 570 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 PPWD1Q96BP3 646 aaKnown RBP13.35□□□□□ -0.27
NEK3-205ENST00000610828 EFHD1Q9BUP0 239 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 MARK1Q9P0L2 795 aa13.35□□□□□ -0.27
NEK3-205ENST00000610828 MRPS23Q9Y3D9 190 aaKnown RBP13.35□□□□□ -0.27
NEK3-205ENST00000610828 PABPN1LA6NDY0 278 aaKnown RBP13.34□□□□□ -0.27
NEK3-205ENST00000610828 RGS14O43566 566 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms