RNA–Protein interactions for RNA: ENST00000608903.5

CTCFL-221, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,135 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-221ENST00000608903 CFAP206Q8IYR0 622 aa11.33□□□□□ -0.6
CTCFL-221ENST00000608903 FBXL6Q8N531 539 aa11.33□□□□□ -0.6
CTCFL-221ENST00000608903 MAGEC3Q8TD91 643 aa11.33□□□□□ -0.6
CTCFL-221ENST00000608903 ZNF75CPQ92670 426 aaPredicted RBP11.33□□□□□ -0.6
CTCFL-221ENST00000608903 KIAA1191Q96A73 305 aa11.33□□□□□ -0.6
CTCFL-221ENST00000608903 THOC1Q96FV9 657 aaKnown RBP11.33□□□□□ -0.6
CTCFL-221ENST00000608903 PITPNM3Q9BZ71 974 aa11.33□□□□□ -0.6
CTCFL-221ENST00000608903 ZCCHC2Q9C0B9 1178 aaKnown RBP11.33□□□□□ -0.6
CTCFL-221ENST00000608903 IQCGQ9H095 443 aaKnown RBP11.33□□□□□ -0.6
CTCFL-221ENST00000608903 TCEAL2Q9H3H9 227 aaPredicted RBP11.33□□□□□ -0.6
CTCFL-221ENST00000608903 TFB2MQ9H5Q4 396 aaKnown RBP11.33□□□□□ -0.6
CTCFL-221ENST00000608903 COG4Q9H9E3 785 aa11.33□□□□□ -0.6
CTCFL-221ENST00000608903 COPG2Q9UBF2 871 aa11.33□□□□□ -0.6
CTCFL-221ENST00000608903 PRSS38A1L453 326 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 MGAT4DA6NG13 374 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 BTN3A1O00481 513 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 DNAJC8O75937 253 aaPredicted RBP11.32□□□□□ -0.6
CTCFL-221ENST00000608903 DGKAP23743 735 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 AVPR2P30518 371 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 ARRB2P32121 409 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 PHKG1Q16816 387 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 ALG11Q2TAA5 492 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 TSNAXIP1Q2TAA8 658 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 CCDC153Q494R4 210 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 PLEKHS1Q5SXH7 462 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 LRRTM4Q86VH4 590 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 LCA5Q86VQ0 697 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 OXR1Q8N573 874 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 ANKS4BQ8N8V4 417 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 OR56A4Q8NGH8 313 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 OR2L2Q8NH16 312 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 CCL4L1Q8NHW4 92 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 NELL1Q92832 810 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 ZNF514Q96K75 400 aaPredicted RBP11.32□□□□□ -0.6
CTCFL-221ENST00000608903 RMDN2Q96LZ7 410 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 WDR92Q96MX6 357 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 MRPL57Q9BQC6 102 aaKnown RBP11.32□□□□□ -0.6
CTCFL-221ENST00000608903 FAM126AQ9BYI3 521 aaPredicted RBP11.32□□□□□ -0.6
CTCFL-221ENST00000608903 PCED1AQ9H1Q7 454 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 DUSP15Q9H1R2 295 aaPredicted RBP11.32□□□□□ -0.6
CTCFL-221ENST00000608903 MRPL46Q9H2W6 279 aaKnown RBP11.32□□□□□ -0.6
CTCFL-221ENST00000608903 ZNF395Q9H8N7 513 aaPredicted RBP11.32□□□□□ -0.6
CTCFL-221ENST00000608903 CYP4F12Q9HCS2 524 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 DNAJC16Q9Y2G8 782 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 UBXN8O00124 270 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 QSOX1O00391 747 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 MAP3K13O43283 966 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 EDF1O60869 148 aaKnown RBP11.32□□□□□ -0.6
CTCFL-221ENST00000608903 THEGLP0DJG4 465 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 FGF3P11487 239 aaPredicted RBP11.32□□□□□ -0.6
CTCFL-221ENST00000608903 CPA3P15088 417 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 BGNP21810 368 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 GNPDA1P46926 289 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 YPEL5P62699 121 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 FZD2Q14332 565 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 TCEA2Q15560 299 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 SNCBQ16143 134 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 PPP1R3AQ16821 1122 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 ZNF542PQ5EBM4 170 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 ZYG11AQ6WRX3 759 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 SLC36A4Q6YBV0 504 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 CHST15Q7LFX5 561 aaPredicted RBP11.32□□□□□ -0.6
CTCFL-221ENST00000608903 LONP2Q86WA8 852 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 PARP9Q8IXQ6 854 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 SPDYE1Q8NFV5 336 aaPredicted RBP11.32□□□□□ -0.6
CTCFL-221ENST00000608903 OR6Y1Q8NGX8 325 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 DNASE2BQ8WZ79 361 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 SPACA7Q96KW9 195 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 CXorf56Q9H5V9 222 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 SIRPGQ9P1W8 387 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 MCM8Q9UJA3 840 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 MOSPD1Q9UJG1 213 aa11.32□□□□□ -0.6
CTCFL-221ENST00000608903 C17orf113A0A1B0GUU1 675 aa11.31□□□□□ -0.6
CTCFL-221ENST00000608903 LRRC14BA6NHZ5 514 aa11.31□□□□□ -0.6
CTCFL-221ENST00000608903 APOA4P06727 396 aa11.31□□□□□ -0.6
CTCFL-221ENST00000608903 CBSLP0DN79 551 aa11.31□□□□□ -0.6
CTCFL-221ENST00000608903 ACP5P13686 325 aa11.31□□□□□ -0.6
CTCFL-221ENST00000608903 CBSP35520 551 aa11.31□□□□□ -0.6
CTCFL-221ENST00000608903 RABIFP47224 123 aa11.31□□□□□ -0.6
CTCFL-221ENST00000608903 ATP6V0D1P61421 351 aa11.31□□□□□ -0.6
CTCFL-221ENST00000608903 ABRQ12979 859 aa11.31□□□□□ -0.6
CTCFL-221ENST00000608903 ZXDCQ2QGD7 858 aaPredicted RBP11.31□□□□□ -0.6
CTCFL-221ENST00000608903 C18orf21Q32NC0 220 aaPredicted RBP11.31□□□□□ -0.6
CTCFL-221ENST00000608903 FBXO48Q5FWF7 155 aa11.31□□□□□ -0.6
CTCFL-221ENST00000608903 FAM219BQ5XKK7 198 aa11.31□□□□□ -0.6
CTCFL-221ENST00000608903 ZCCHC23Q6ZST2 131 aa11.31□□□□□ -0.6
CTCFL-221ENST00000608903 TRPM8Q7Z2W7 1104 aa11.31□□□□□ -0.6
CTCFL-221ENST00000608903 RD3Q7Z3Z2 195 aa11.31□□□□□ -0.6
CTCFL-221ENST00000608903 AMZ2Q86W34 360 aa11.31□□□□□ -0.6
CTCFL-221ENST00000608903 SLC22A15Q8IZD6 547 aa11.31□□□□□ -0.6
CTCFL-221ENST00000608903 CCDC63Q8NA47 563 aa11.31□□□□□ -0.6
CTCFL-221ENST00000608903 LRRC8CQ8TDW0 803 aa11.31□□□□□ -0.6
CTCFL-221ENST00000608903 ASZ1Q8WWH4 475 aa11.31□□□□□ -0.6
CTCFL-221ENST00000608903 ASB11Q8WXH4 323 aa11.31□□□□□ -0.6
CTCFL-221ENST00000608903 EXT2Q93063 718 aa11.31□□□□□ -0.6
CTCFL-221ENST00000608903 C20orf27Q9GZN8 174 aa11.31□□□□□ -0.6
CTCFL-221ENST00000608903 MIR1-1HGQ9H1L0 117 aa11.31□□□□□ -0.6
CTCFL-221ENST00000608903 OR52A5Q9H2C5 316 aa11.31□□□□□ -0.6
CTCFL-221ENST00000608903 CARS2Q9HA77 564 aaKnown RBP11.31□□□□□ -0.6
CTCFL-221ENST00000608903 TM9SF3Q9HD45 589 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms