RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 COLEC12Q5KU26 742 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 KCTD11Q693B1 232 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 TCTN3Q6NUS6 607 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 ARMC6Q6NXE6 501 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 FAM199XQ6PEV8 388 aaPredicted RBP7.42□□□□□ -1.22
CUX1-219ENST00000606749 FBXO38Q6PIJ6 1188 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 RAD9BQ6WBX8 426 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 CARFQ8N187 725 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 FAM71DQ8N9W8 422 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 SLC38A9Q8NBW4 561 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 PHC3Q8NDX5 983 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 ACVR1CQ8NER5 493 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 OR8K5Q8NH50 307 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 HEXDCQ8WVB3 486 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 MRFAP1L1Q96HT8 127 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 RMDN2Q96LZ7 410 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 PPM1MQ96MI6 270 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 PPP1R2P1Q96PQ5 205 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 FERD3LQ96RJ6 166 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 RUFY1Q96T51 708 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 COPS8Q99627 209 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 TUBB2BQ9BVA1 445 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 GPR87Q9BY21 358 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 TWSG1Q9GZX9 223 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 ACTL8Q9H568 366 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 TLK1Q9UKI8 766 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 HEBP2Q9Y5Z4 205 aa7.42□□□□□ -1.22
CUX1-219ENST00000606749 ZNF106Q9H2Y7 1883 aaKnown RBP7.42□□□□□ -1.22
CUX1-219ENST00000606749 TRBV5-4A0A0C4DH59 114 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 SLC9B1P1A6NJY1 282 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 CYSRT1A8MQ03 144 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 CFAP99D6REC4 459 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 MKRN2OSH3BPM6 223 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 H7C0S8 307 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 ZNF189O75820 626 aaPredicted RBP7.41□□□□□ -1.22
CUX1-219ENST00000606749 IPO7O95373 1038 aaKnown RBP7.41□□□□□ -1.22
CUX1-219ENST00000606749 METTL18O95568 372 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 NR1D1P20393 614 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 CDH3P22223 829 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 ACRV1P26436 265 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 PDHA2P29803 388 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 PRDX3P30048 256 aaKnown RBP7.41□□□□□ -1.22
CUX1-219ENST00000606749 MC4RP32245 332 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 CD151P48509 253 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 VAV2P52735 878 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 PMS2P54278 862 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 RPS15P62841 145 aaKnown RBP7.41□□□□□ -1.22
CUX1-219ENST00000606749 FOXK1P85037 733 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 KLRB1Q12918 225 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 PRKAA1Q13131 559 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 GPS2Q13227 327 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 SEMA5AQ13591 1074 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 LAMB3Q13751 1172 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 GPR19Q15760 415 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 UGT8Q16880 541 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 ZRANB3Q5FWF4 1079 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 TMTC4Q5T4D3 741 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 PRAMEF17Q5VTA0 474 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 ZNF517Q6ZMY9 492 aaPredicted RBP7.41□□□□□ -1.22
CUX1-219ENST00000606749 MICALCLQ6ZW33 695 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 TAS2R42Q7RTR8 314 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 SERPINA9Q86WD7 417 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 TMEM126BQ8IUX1 230 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 APLFQ8IW19 511 aaPredicted RBP7.41□□□□□ -1.22
CUX1-219ENST00000606749 PIANPQ8IYJ0 282 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 CLDN19Q8N6F1 224 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 TTC13Q8NBP0 860 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 ACRBPQ8NEB7 543 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 HM13Q8TCT9 377 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 STYXQ8WUJ0 223 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 LCN9Q8WX39 176 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 COL26A1Q96A83 441 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 LRRC45Q96CN5 670 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 ZNF501Q96CX3 271 aaPredicted RBP7.41□□□□□ -1.22
CUX1-219ENST00000606749 CDKN2AIPNLQ96HQ2 116 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 DNAJC1Q96KC8 554 aaKnown RBP7.41□□□□□ -1.22
CUX1-219ENST00000606749 NRTNQ99748 197 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 RBSNQ9H1K0 784 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 OR52A5Q9H2C5 316 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 SRMSQ9H3Y6 488 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 COG4Q9H9E3 785 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 LATS2Q9NRM7 1088 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 C1GALT1Q9NS00 363 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 NLE1Q9NVX2 485 aaPredicted RBP7.41□□□□□ -1.22
CUX1-219ENST00000606749 ZDHHC3Q9NYG2 299 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 AMFRQ9UKV5 643 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 POMT2Q9UKY4 750 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 FARSAQ9Y285 508 aaKnown RBP7.41□□□□□ -1.22
CUX1-219ENST00000606749 BTRCQ9Y297 605 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 TP53TG5Q9Y2B4 290 aa7.41□□□□□ -1.22
CUX1-219ENST00000606749 FLNBO75369 2602 aaKnown RBP7.41□□□□□ -1.22
CUX1-219ENST00000606749 SETXQ7Z333 2677 aaKnown RBP7.41□□□□□ -1.22
CUX1-219ENST00000606749 GOLGA6L9A6NEM1 432 aa7.4□□□□□ -1.22
CUX1-219ENST00000606749 MROH6A6NGR9 719 aa7.4□□□□□ -1.22
CUX1-219ENST00000606749 MATN2O00339 956 aa7.4□□□□□ -1.22
CUX1-219ENST00000606749 BTN3A3O00478 584 aa7.4□□□□□ -1.22
CUX1-219ENST00000606749 DDX3YO15523 660 aaKnown RBP7.4□□□□□ -1.22
CUX1-219ENST00000606749 PSMD3O43242 534 aa7.4□□□□□ -1.22
CUX1-219ENST00000606749 CPNE3O75131 537 aaKnown RBP7.4□□□□□ -1.22
CUX1-219ENST00000606749 RFPL1O75677 317 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms