RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 APOC2P02655 101 aa17.35■□□□□ 0.37
SHKBP1-227ENST00000602011 PDGFAP04085 211 aa17.35■□□□□ 0.37
SHKBP1-227ENST00000602011 HBQ1P09105 142 aa17.35■□□□□ 0.37
SHKBP1-227ENST00000602011 RRADP55042 308 aa17.35■□□□□ 0.37
SHKBP1-227ENST00000602011 PPP1CAP62136 330 aa17.35■□□□□ 0.37
SHKBP1-227ENST00000602011 GPR33Q49SQ1 333 aa17.35■□□□□ 0.37
SHKBP1-227ENST00000602011 FHL5Q5TD97 284 aa17.35■□□□□ 0.37
SHKBP1-227ENST00000602011 FAM199XQ6PEV8 388 aaPredicted RBP17.35■□□□□ 0.37
SHKBP1-227ENST00000602011 CFAP206Q8IYR0 622 aa17.35■□□□□ 0.37
SHKBP1-227ENST00000602011 TMEM102Q8N9M5 508 aaPredicted RBP17.35■□□□□ 0.37
SHKBP1-227ENST00000602011 HM13Q8TCT9 377 aa17.35■□□□□ 0.37
SHKBP1-227ENST00000602011 C17orf62Q9BQA9 187 aa17.35■□□□□ 0.37
SHKBP1-227ENST00000602011 GBA3Q9H227 469 aa17.35■□□□□ 0.37
SHKBP1-227ENST00000602011 SOHLH2Q9NX45 425 aa17.35■□□□□ 0.37
SHKBP1-227ENST00000602011 AKR1B15C9JRZ8 316 aaPredicted RBP17.34■□□□□ 0.37
SHKBP1-227ENST00000602011 DPM1O60762 260 aa17.34■□□□□ 0.37
SHKBP1-227ENST00000602011 DNAJB5O75953 348 aa17.34■□□□□ 0.37
SHKBP1-227ENST00000602011 CDH3P22223 829 aa17.34■□□□□ 0.37
SHKBP1-227ENST00000602011 MAGEA1P43355 309 aa17.34■□□□□ 0.37
SHKBP1-227ENST00000602011 RPA4Q13156 261 aa17.34■□□□□ 0.37
SHKBP1-227ENST00000602011 LAMB3Q13751 1172 aa17.34■□□□□ 0.37
SHKBP1-227ENST00000602011 NOMO1Q15155 1222 aa17.34■□□□□ 0.37
SHKBP1-227ENST00000602011 SKOR2Q2VWA4 1001 aaPredicted RBP17.34■□□□□ 0.37
SHKBP1-227ENST00000602011 MED25Q71SY5 747 aa17.34■□□□□ 0.37
SHKBP1-227ENST00000602011 CCDC50Q8IVM0 306 aa17.34■□□□□ 0.37
SHKBP1-227ENST00000602011 DSELQ8IZU8 1212 aa17.34■□□□□ 0.37
SHKBP1-227ENST00000602011 OR4K2Q8NGD2 314 aa17.34■□□□□ 0.37
SHKBP1-227ENST00000602011 CPT1CQ8TCG5 803 aa17.34■□□□□ 0.37
SHKBP1-227ENST00000602011 HAUS1Q96CS2 278 aa17.34■□□□□ 0.37
SHKBP1-227ENST00000602011 IP6K3Q96PC2 410 aa17.34■□□□□ 0.37
SHKBP1-227ENST00000602011 COPS8Q99627 209 aa17.34■□□□□ 0.37
SHKBP1-227ENST00000602011 SRMSQ9H3Y6 488 aa17.34■□□□□ 0.37
SHKBP1-227ENST00000602011 TFB2MQ9H5Q4 396 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-227ENST00000602011 MVB12BQ9H7P6 319 aa17.34■□□□□ 0.37
SHKBP1-227ENST00000602011 CUEDC1Q9NWM3 386 aaPredicted RBP17.34■□□□□ 0.37
SHKBP1-227ENST00000602011 CRLS1Q9UJA2 301 aa17.34■□□□□ 0.37
SHKBP1-227ENST00000602011 POMT2Q9UKY4 750 aa17.34■□□□□ 0.37
SHKBP1-227ENST00000602011 SNX7Q9UNH6 387 aa17.34■□□□□ 0.37
SHKBP1-227ENST00000602011 TNRC6AQ8NDV7 1962 aaKnown RBP17.33■□□□□ 0.37
SHKBP1-227ENST00000602011 H7C0C1 242 aa17.33■□□□□ 0.36
SHKBP1-227ENST00000602011 IFRD1O00458 451 aaPredicted RBP17.33■□□□□ 0.36
SHKBP1-227ENST00000602011 BUD23O43709 281 aaKnown RBP17.33■□□□□ 0.36
SHKBP1-227ENST00000602011 CEACAM4O75871 244 aa17.33■□□□□ 0.36
SHKBP1-227ENST00000602011 AGTP01019 485 aa17.33■□□□□ 0.36
SHKBP1-227ENST00000602011 IGHEP01854 428 aa17.33■□□□□ 0.36
SHKBP1-227ENST00000602011 ATP1B2P14415 290 aaPredicted RBP17.33■□□□□ 0.36
SHKBP1-227ENST00000602011 ITGALP20701 1170 aa17.33■□□□□ 0.36
SHKBP1-227ENST00000602011 GNLYP22749 145 aa17.33■□□□□ 0.36
SHKBP1-227ENST00000602011 PBLDP30039 288 aaPredicted RBP17.33■□□□□ 0.36
SHKBP1-227ENST00000602011 CETN2P41208 172 aa17.33■□□□□ 0.36
SHKBP1-227ENST00000602011 ATP5OP48047 213 aa17.33■□□□□ 0.36
SHKBP1-227ENST00000602011 PRLHRP49683 370 aa17.33■□□□□ 0.36
SHKBP1-227ENST00000602011 CCL11P51671 97 aa17.33■□□□□ 0.36
SHKBP1-227ENST00000602011 KPNA2P52292 529 aaKnown RBP17.33■□□□□ 0.36
SHKBP1-227ENST00000602011 GPS2Q13227 327 aa17.33■□□□□ 0.36
SHKBP1-227ENST00000602011 PLEKHS1Q5SXH7 462 aa17.33■□□□□ 0.36
SHKBP1-227ENST00000602011 CCDC181Q5TID7 509 aa17.33■□□□□ 0.36
SHKBP1-227ENST00000602011 SARM1Q6SZW1 724 aa17.33■□□□□ 0.36
SHKBP1-227ENST00000602011 SNX20Q7Z614 316 aa17.33■□□□□ 0.36
SHKBP1-227ENST00000602011 OR4E2Q8NGC2 313 aa17.33■□□□□ 0.36
SHKBP1-227ENST00000602011 LCN9Q8WX39 176 aa17.33■□□□□ 0.36
SHKBP1-227ENST00000602011 RUFY1Q96T51 708 aa17.33■□□□□ 0.36
SHKBP1-227ENST00000602011 DHRS4Q9BTZ2 278 aa17.33■□□□□ 0.36
SHKBP1-227ENST00000602011 CHST8Q9H2A9 424 aa17.33■□□□□ 0.36
SHKBP1-227ENST00000602011 AKIRIN1Q9H9L7 192 aaPredicted RBP17.33■□□□□ 0.36
SHKBP1-227ENST00000602011 TCFL5Q9UL49 500 aa17.33■□□□□ 0.36
SHKBP1-227ENST00000602011 HYOU1Q9Y4L1 999 aa17.33■□□□□ 0.36
SHKBP1-227ENST00000602011 ARL5AQ9Y689 179 aa17.33■□□□□ 0.36
SHKBP1-227ENST00000602011 CFAP20Q9Y6A4 193 aaKnown RBP17.33■□□□□ 0.36
SHKBP1-227ENST00000602011 UNC79Q9P2D8 2635 aa17.32■□□□□ 0.36
SHKBP1-227ENST00000602011 POLBP06746 335 aa17.32■□□□□ 0.36
SHKBP1-227ENST00000602011 RNF224P0DH78 156 aa17.32■□□□□ 0.36
SHKBP1-227ENST00000602011 AGXTP21549 392 aa17.32■□□□□ 0.36
SHKBP1-227ENST00000602011 ADRA1AP35348 466 aa17.32■□□□□ 0.36
SHKBP1-227ENST00000602011 PREPP48147 710 aa17.32■□□□□ 0.36
SHKBP1-227ENST00000602011 XIAPP98170 497 aa17.32■□□□□ 0.36
SHKBP1-227ENST00000602011 GPR19Q15760 415 aa17.32■□□□□ 0.36
SHKBP1-227ENST00000602011 C11orf63Q6NUN7 778 aa17.32■□□□□ 0.36
SHKBP1-227ENST00000602011 DET1Q7L5Y6 550 aa17.32■□□□□ 0.36
SHKBP1-227ENST00000602011 CCDC170Q8IYT3 715 aa17.32■□□□□ 0.36
SHKBP1-227ENST00000602011 NXPE1Q8N323 547 aa17.32■□□□□ 0.36
SHKBP1-227ENST00000602011 ADAMTS17Q8TE56 1095 aa17.32■□□□□ 0.36
SHKBP1-227ENST00000602011 CLIP3Q96DZ5 547 aa17.32■□□□□ 0.36
SHKBP1-227ENST00000602011 FICDQ9BVA6 458 aa17.32■□□□□ 0.36
SHKBP1-227ENST00000602011 TRIM55Q9BYV6 548 aa17.32■□□□□ 0.36
SHKBP1-227ENST00000602011 ARNT2Q9HBZ2 717 aa17.32■□□□□ 0.36
SHKBP1-227ENST00000602011 C5AR2Q9P296 337 aa17.32■□□□□ 0.36
SHKBP1-227ENST00000602011 PADI2Q9Y2J8 665 aa17.32■□□□□ 0.36
SHKBP1-227ENST00000602011 MAP4K5Q9Y4K4 846 aa17.32■□□□□ 0.36
SHKBP1-227ENST00000602011 ZNF106Q9H2Y7 1883 aaKnown RBP17.32■□□□□ 0.36
SHKBP1-227ENST00000602011 SEC16AO15027 2179 aa17.32■□□□□ 0.36
SHKBP1-227ENST00000602011 PRRC2CQ9Y520 2896 aaKnown RBP17.31■□□□□ 0.36
SHKBP1-227ENST00000602011 ARGFXA6NJG6 315 aa17.31■□□□□ 0.36
SHKBP1-227ENST00000602011 SLC9B1P1A6NJY1 282 aa17.31■□□□□ 0.36
SHKBP1-227ENST00000602011 TMEM63AO94886 807 aa17.31■□□□□ 0.36
SHKBP1-227ENST00000602011 LCA5LO95447 670 aa17.31■□□□□ 0.36
SHKBP1-227ENST00000602011 POLR2CP19387 275 aaPredicted RBP17.31■□□□□ 0.36
SHKBP1-227ENST00000602011 CYP2A7P20853 494 aa17.31■□□□□ 0.36
SHKBP1-227ENST00000602011 RBL1P28749 1068 aa17.31■□□□□ 0.36
SHKBP1-227ENST00000602011 PRDX3P30048 256 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms