RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 POMT2Q9UKY4 750 aa17.51■□□□□ 0.39
CHMP2A-208ENST00000601220 EFR3BQ9Y2G0 817 aa17.51■□□□□ 0.39
CHMP2A-208ENST00000601220 C17orf113A0A1B0GUU1 675 aa17.5■□□□□ 0.39
CHMP2A-208ENST00000601220 SLC9B1P1A6NJY1 282 aa17.5■□□□□ 0.39
CHMP2A-208ENST00000601220 CAPN1P07384 714 aa17.5■□□□□ 0.39
CHMP2A-208ENST00000601220 PSMB4P28070 264 aa17.5■□□□□ 0.39
CHMP2A-208ENST00000601220 RORAP35398 523 aa17.5■□□□□ 0.39
CHMP2A-208ENST00000601220 COPS2P61201 443 aa17.5■□□□□ 0.39
CHMP2A-208ENST00000601220 RPS15P62841 145 aaKnown RBP17.5■□□□□ 0.39
CHMP2A-208ENST00000601220 OTUD4Q01804 1114 aaKnown RBP17.5■□□□□ 0.39
CHMP2A-208ENST00000601220 ABRQ12979 859 aa17.5■□□□□ 0.39
CHMP2A-208ENST00000601220 ITPRIPL1Q6GPH6 555 aa17.5■□□□□ 0.39
CHMP2A-208ENST00000601220 TMEM126BQ8IUX1 230 aa17.5■□□□□ 0.39
CHMP2A-208ENST00000601220 NXPE1Q8N323 547 aa17.5■□□□□ 0.39
CHMP2A-208ENST00000601220 RNF214Q8ND24 703 aa17.5■□□□□ 0.39
CHMP2A-208ENST00000601220 CCM2Q9BSQ5 444 aa17.5■□□□□ 0.39
CHMP2A-208ENST00000601220 OR52A5Q9H2C5 316 aa17.5■□□□□ 0.39
CHMP2A-208ENST00000601220 FAM96AQ9H5X1 160 aa17.5■□□□□ 0.39
CHMP2A-208ENST00000601220 FAM8A1Q9UBU6 413 aa17.5■□□□□ 0.39
CHMP2A-208ENST00000601220 AAR2Q9Y312 384 aaKnown RBP17.5■□□□□ 0.39
CHMP2A-208ENST00000601220 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.5■□□□□ 0.39
CHMP2A-208ENST00000601220 PCDHGA9Q9Y5G4 932 aaKnown RBP17.5■□□□□ 0.39
CHMP2A-208ENST00000601220 PCDHA3Q9Y5H8 950 aa17.5■□□□□ 0.39
CHMP2A-208ENST00000601220 COLEC10Q9Y6Z7 277 aa17.5■□□□□ 0.39
CHMP2A-208ENST00000601220 USP9XQ93008 2570 aaPredicted RBP17.5■□□□□ 0.39
CHMP2A-208ENST00000601220 USP9YO00507 2555 aaPredicted RBP17.49■□□□□ 0.39
CHMP2A-208ENST00000601220 IGLV3-16A0A075B6K0 115 aa17.49■□□□□ 0.39
CHMP2A-208ENST00000601220 RCCD1A6NED2 376 aa17.49■□□□□ 0.39
CHMP2A-208ENST00000601220 BTN3A3O00478 584 aa17.49■□□□□ 0.39
CHMP2A-208ENST00000601220 DDX3YO15523 660 aaKnown RBP17.49■□□□□ 0.39
CHMP2A-208ENST00000601220 LDB2O43679 373 aa17.49■□□□□ 0.39
CHMP2A-208ENST00000601220 SLC35G4P0C7Q5 338 aa17.49■□□□□ 0.39
CHMP2A-208ENST00000601220 GP1BBP13224 206 aa17.49■□□□□ 0.39
CHMP2A-208ENST00000601220 PTMSP20962 102 aa17.49■□□□□ 0.39
CHMP2A-208ENST00000601220 NDUFS1P28331 727 aa17.49■□□□□ 0.39
CHMP2A-208ENST00000601220 CTNNA1P35221 906 aaKnown RBP17.49■□□□□ 0.39
CHMP2A-208ENST00000601220 PTPN7P35236 360 aa17.49■□□□□ 0.39
CHMP2A-208ENST00000601220 CDKN1CP49918 316 aaPredicted RBP17.49■□□□□ 0.39
CHMP2A-208ENST00000601220 CHAF1BQ13112 559 aa17.49■□□□□ 0.39
CHMP2A-208ENST00000601220 SNX20Q7Z614 316 aa17.49■□□□□ 0.39
CHMP2A-208ENST00000601220 DSELQ8IZU8 1212 aa17.49■□□□□ 0.39
CHMP2A-208ENST00000601220 ACVR1CQ8NER5 493 aa17.49■□□□□ 0.39
CHMP2A-208ENST00000601220 OR1L3Q8NH93 324 aa17.49■□□□□ 0.39
CHMP2A-208ENST00000601220 HM13Q8TCT9 377 aa17.49■□□□□ 0.39
CHMP2A-208ENST00000601220 MR1Q95460 341 aa17.49■□□□□ 0.39
CHMP2A-208ENST00000601220 TLR10Q9BXR5 811 aa17.49■□□□□ 0.39
CHMP2A-208ENST00000601220 TSPY26PQ9H489 355 aa17.49■□□□□ 0.39
CHMP2A-208ENST00000601220 C1GALT1Q9NS00 363 aa17.49■□□□□ 0.39
CHMP2A-208ENST00000601220 TRBV5-4A0A0C4DH59 114 aa17.48■□□□□ 0.39
CHMP2A-208ENST00000601220 ARGFXA6NJG6 315 aa17.48■□□□□ 0.39
CHMP2A-208ENST00000601220 MEN1O00255 615 aa17.48■□□□□ 0.39
CHMP2A-208ENST00000601220 CCL22O00626 93 aa17.48■□□□□ 0.39
CHMP2A-208ENST00000601220 PJA2O43164 708 aa17.48■□□□□ 0.39
CHMP2A-208ENST00000601220 CEACAM4O75871 244 aa17.48■□□□□ 0.39
CHMP2A-208ENST00000601220 CRTAMO95727 393 aa17.48■□□□□ 0.39
CHMP2A-208ENST00000601220 RAB40ALP0C0E4 278 aa17.48■□□□□ 0.39
CHMP2A-208ENST00000601220 MSL3P1P0C860 447 aa17.48■□□□□ 0.39
CHMP2A-208ENST00000601220 ATP1B2P14415 290 aaPredicted RBP17.48■□□□□ 0.39
CHMP2A-208ENST00000601220 PRDX3P30048 256 aaKnown RBP17.48■□□□□ 0.39
CHMP2A-208ENST00000601220 PDE1BQ01064 536 aa17.48■□□□□ 0.39
CHMP2A-208ENST00000601220 SPARCL1Q14515 664 aa17.48■□□□□ 0.39
CHMP2A-208ENST00000601220 GSE1Q14687 1217 aa17.48■□□□□ 0.39
CHMP2A-208ENST00000601220 TMTC4Q5T4D3 741 aa17.48■□□□□ 0.39
CHMP2A-208ENST00000601220 ARMC6Q6NXE6 501 aa17.48■□□□□ 0.39
CHMP2A-208ENST00000601220 CCDC110Q8TBZ0 833 aa17.48■□□□□ 0.39
CHMP2A-208ENST00000601220 ULK4Q96C45 1275 aa17.48■□□□□ 0.39
CHMP2A-208ENST00000601220 DCUN1D1Q96GG9 259 aa17.48■□□□□ 0.39
CHMP2A-208ENST00000601220 SPATA13Q96N96 652 aa17.48■□□□□ 0.39
CHMP2A-208ENST00000601220 FAM118BQ9BPY3 351 aa17.48■□□□□ 0.39
CHMP2A-208ENST00000601220 PITPNM3Q9BZ71 974 aa17.48■□□□□ 0.39
CHMP2A-208ENST00000601220 OSBPL8Q9BZF1 889 aa17.48■□□□□ 0.39
CHMP2A-208ENST00000601220 ING2Q9H160 280 aa17.48■□□□□ 0.39
CHMP2A-208ENST00000601220 TFB2MQ9H5Q4 396 aaKnown RBP17.48■□□□□ 0.39
CHMP2A-208ENST00000601220 COG4Q9H9E3 785 aa17.48■□□□□ 0.39
CHMP2A-208ENST00000601220 PCMTD2Q9NV79 361 aa17.48■□□□□ 0.39
CHMP2A-208ENST00000601220 CRLS1Q9UJA2 301 aa17.48■□□□□ 0.39
CHMP2A-208ENST00000601220 HEBP2Q9Y5Z4 205 aa17.48■□□□□ 0.39
CHMP2A-208ENST00000601220 CCDC66A2RUB6 948 aa17.47■□□□□ 0.39
CHMP2A-208ENST00000601220 KCNN4O15554 427 aa17.47■□□□□ 0.39
CHMP2A-208ENST00000601220 RBP3P10745 1247 aa17.47■□□□□ 0.39
CHMP2A-208ENST00000601220 ST6GAL1P15907 406 aa17.47■□□□□ 0.39
CHMP2A-208ENST00000601220 PDHA2P29803 388 aa17.47■□□□□ 0.39
CHMP2A-208ENST00000601220 PTGIRP43119 386 aa17.47■□□□□ 0.39
CHMP2A-208ENST00000601220 CCL11P51671 97 aa17.47■□□□□ 0.39
CHMP2A-208ENST00000601220 GSDMDP57764 484 aa17.47■□□□□ 0.39
CHMP2A-208ENST00000601220 EIF3EP60228 445 aaKnown RBP17.47■□□□□ 0.39
CHMP2A-208ENST00000601220 TMPRSS15P98073 1019 aa17.47■□□□□ 0.39
CHMP2A-208ENST00000601220 SKOR2Q2VWA4 1001 aaPredicted RBP17.47■□□□□ 0.39
CHMP2A-208ENST00000601220 NADK2Q4G0N4 442 aa17.47■□□□□ 0.39
CHMP2A-208ENST00000601220 FAM69BQ5VUD6 431 aa17.47■□□□□ 0.39
CHMP2A-208ENST00000601220 KCTD11Q693B1 232 aa17.47■□□□□ 0.39
CHMP2A-208ENST00000601220 AADACL2Q6P093 401 aa17.47■□□□□ 0.39
CHMP2A-208ENST00000601220 ATCAYQ86WG3 371 aa17.47■□□□□ 0.39
CHMP2A-208ENST00000601220 CDKL3Q8IVW4 592 aaPredicted RBP17.47■□□□□ 0.39
CHMP2A-208ENST00000601220 CCDC170Q8IYT3 715 aa17.47■□□□□ 0.39
CHMP2A-208ENST00000601220 ENDOVQ8N8Q3 282 aaKnown RBP17.47■□□□□ 0.39
CHMP2A-208ENST00000601220 HEXDCQ8WVB3 486 aa17.47■□□□□ 0.39
CHMP2A-208ENST00000601220 LCN9Q8WX39 176 aa17.47■□□□□ 0.39
CHMP2A-208ENST00000601220 CPT1BQ92523 772 aa17.47■□□□□ 0.39
CHMP2A-208ENST00000601220 COPS8Q99627 209 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms