RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 PRDM8Q9NQV8 689 aa22.45■■□□□ 1.18
IRF3-227ENST00000600911 TBC1D29Q9UFV1 150 aa22.45■■□□□ 1.18
IRF3-227ENST00000600911 APOBEC3BQ9UH17 382 aaKnown RBP22.45■■□□□ 1.18
IRF3-227ENST00000600911 TMEM120BA0PK00 339 aa22.44■■□□□ 1.18
IRF3-227ENST00000600911 TK2O00142 265 aa22.44■■□□□ 1.18
IRF3-227ENST00000600911 LIN7AO14910 233 aaPredicted RBP22.44■■□□□ 1.18
IRF3-227ENST00000600911 SDC3O75056 442 aa22.44■■□□□ 1.18
IRF3-227ENST00000600911 NME1P15531 152 aaKnown RBP22.44■■□□□ 1.18
IRF3-227ENST00000600911 TFEBP19484 476 aa22.44■■□□□ 1.18
IRF3-227ENST00000600911 C21orf59P57076 290 aa22.44■■□□□ 1.18
IRF3-227ENST00000600911 TECRLQ5HYJ1 363 aa22.44■■□□□ 1.18
IRF3-227ENST00000600911 LRRC8EQ6NSJ5 796 aa22.44■■□□□ 1.18
IRF3-227ENST00000600911 SLC30A9Q6PML9 568 aa22.44■■□□□ 1.18
IRF3-227ENST00000600911 FSTL5Q8N475 847 aaPredicted RBP22.44■■□□□ 1.18
IRF3-227ENST00000600911 NKAPQ8N5F7 415 aaKnown RBP22.44■■□□□ 1.18
IRF3-227ENST00000600911 TMEM159Q96B96 161 aa22.44■■□□□ 1.18
IRF3-227ENST00000600911 WWP1Q9H0M0 922 aa22.44■■□□□ 1.18
IRF3-227ENST00000600911 ARRDC1-AS1Q9H2J1 176 aa22.44■■□□□ 1.18
IRF3-227ENST00000600911 ALG9Q9H6U8 611 aa22.44■■□□□ 1.18
IRF3-227ENST00000600911 KCNK9Q9NPC2 374 aa22.44■■□□□ 1.18
IRF3-227ENST00000600911 CFAP20Q9Y6A4 193 aaKnown RBP22.44■■□□□ 1.18
IRF3-227ENST00000600911 RALGAPA1Q6GYQ0 2036 aa22.44■■□□□ 1.18
IRF3-227ENST00000600911 PRAMEF33A0A0G2JMD5 474 aa22.43■■□□□ 1.18
IRF3-227ENST00000600911 GLRA3O75311 464 aa22.43■■□□□ 1.18
IRF3-227ENST00000600911 GNSP15586 552 aa22.43■■□□□ 1.18
IRF3-227ENST00000600911 DGKAP23743 735 aa22.43■■□□□ 1.18
IRF3-227ENST00000600911 ACADLP28330 430 aa22.43■■□□□ 1.18
IRF3-227ENST00000600911 ABRQ12979 859 aa22.43■■□□□ 1.18
IRF3-227ENST00000600911 CLCA4Q14CN2 919 aa22.43■■□□□ 1.18
IRF3-227ENST00000600911 PRRT3Q5FWE3 981 aa22.43■■□□□ 1.18
IRF3-227ENST00000600911 DUS1LQ6P1R4 473 aaKnown RBP22.43■■□□□ 1.18
IRF3-227ENST00000600911 RASGRP3Q8IV61 690 aa22.43■■□□□ 1.18
IRF3-227ENST00000600911 OR2I1PQ8NGU4 316 aa22.43■■□□□ 1.18
IRF3-227ENST00000600911 GPBAR1Q8TDU6 330 aa22.43■■□□□ 1.18
IRF3-227ENST00000600911 DENND1AQ8TEH3 1009 aa22.43■■□□□ 1.18
IRF3-227ENST00000600911 PDLIM5Q96HC4 596 aaKnown RBP22.43■■□□□ 1.18
IRF3-227ENST00000600911 FAM111AQ96PZ2 611 aa22.43■■□□□ 1.18
IRF3-227ENST00000600911 NRTNQ99748 197 aa22.43■■□□□ 1.18
IRF3-227ENST00000600911 SELENOSQ9BQE4 189 aa22.43■■□□□ 1.18
IRF3-227ENST00000600911 CAPN10Q9HC96 672 aa22.43■■□□□ 1.18
IRF3-227ENST00000600911 FAM86C1Q9NVL1 165 aa22.43■■□□□ 1.18
IRF3-227ENST00000600911 UCKL1Q9NWZ5 548 aa22.43■■□□□ 1.18
IRF3-227ENST00000600911 TRNAU1APQ9NX07 287 aaKnown RBP22.43■■□□□ 1.18
IRF3-227ENST00000600911 XPR1Q9UBH6 696 aa22.43■■□□□ 1.18
IRF3-227ENST00000600911 PLLPQ9Y342 182 aa22.43■■□□□ 1.18
IRF3-227ENST00000600911 TARM1B6A8C7 271 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 PRPF4O43172 522 aaKnown RBP eCLIP22.42■■□□□ 1.181e-6■■□□□ 14.1
IRF3-227ENST00000600911 SNX2O60749 519 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 EPN2O95208 641 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 PROCP04070 461 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 CFIP05156 583 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 OAS2P29728 719 aaKnown RBP22.42■■□□□ 1.18
IRF3-227ENST00000600911 ACTR1BP42025 376 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 ETV4P43268 484 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 ACTR1AP61163 376 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 BNIP3Q12983 259 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 GRIK2Q13002 908 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 PHKG1Q16816 387 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 TTLL9Q3SXZ7 439 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 CCSMST1Q4G0I0 132 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 TCEAL6Q6IPX3 200 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 SBSNQ6UWP8 590 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 ANKRD42Q8N9B4 389 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 TCEAL3Q969E4 200 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 ZDHHC5Q9C0B5 715 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 IL21RQ9HBE5 538 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 SSU72Q9NP77 194 aaKnown RBP22.42■■□□□ 1.18
IRF3-227ENST00000600911 CPSF2Q9P2I0 782 aaKnown RBP22.42■■□□□ 1.18
IRF3-227ENST00000600911 CIDEBQ9UHD4 219 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 GRID1Q9ULK0 1009 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 SMG5Q9UPR3 1016 aaKnown RBP22.42■■□□□ 1.18
IRF3-227ENST00000600911 A6NCN8 305 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 H3BM21 787 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 BTN3A1O00481 513 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 KPNA5O15131 536 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 PLIN3O60664 434 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 CBSLP0DN79 551 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 COL6A2P12110 1019 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 CBSP35520 551 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 SLC26A3P40879 764 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 CLCNKAP51800 687 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 IL9RQ01113 521 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 TEAD4Q15561 434 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 HSP90B2PQ58FF3 399 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 SUMF1Q8NBK3 374 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 CFAP61Q8NHU2 1237 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 PATE1Q8WXA2 126 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 ATOH8Q96SQ7 321 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 INSM2Q96T92 566 aaPredicted RBP22.42■■□□□ 1.18
IRF3-227ENST00000600911 SUSD2Q9UGT4 822 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 DCDC2Q9UHG0 476 aa22.42■■□□□ 1.18
IRF3-227ENST00000600911 PRR5-ARHGAP8B1AHC4 643 aa22.41■■□□□ 1.18
IRF3-227ENST00000600911 F8W8V4 182 aa22.41■■□□□ 1.18
IRF3-227ENST00000600911 MATN4O95460 622 aa22.41■■□□□ 1.18
IRF3-227ENST00000600911 GSTM1P09488 218 aa22.41■■□□□ 1.18
IRF3-227ENST00000600911 MPC1LP0DKB6 136 aa22.41■■□□□ 1.18
IRF3-227ENST00000600911 BDKRB1P46663 353 aa22.41■■□□□ 1.18
IRF3-227ENST00000600911 WDR4P57081 412 aaKnown RBP22.41■■□□□ 1.18
IRF3-227ENST00000600911 PPP2R2AP63151 447 aa22.41■■□□□ 1.18
IRF3-227ENST00000600911 GSTM4Q03013 218 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms