RNA–Protein interactions for RNA: ENST00000600910.5

PNKP-215, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,600 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-215ENST00000600910 CCDC166P0CW27 439 aa20.03■□□□□ 0.8
PNKP-215ENST00000600910 CBSLP0DN79 551 aa20.03■□□□□ 0.8
PNKP-215ENST00000600910 ENGP17813 658 aa20.03■□□□□ 0.8
PNKP-215ENST00000600910 ATP5DP30049 168 aa20.03■□□□□ 0.8
PNKP-215ENST00000600910 CBSP35520 551 aa20.03■□□□□ 0.8
PNKP-215ENST00000600910 RGS4P49798 205 aa20.03■□□□□ 0.8
PNKP-215ENST00000600910 IL9RQ01113 521 aa20.03■□□□□ 0.8
PNKP-215ENST00000600910 BNIP3Q12983 259 aa20.03■□□□□ 0.8
PNKP-215ENST00000600910 CCDC91Q7Z6B0 441 aa20.03■□□□□ 0.8
PNKP-215ENST00000600910 TBC1D1Q86TI0 1168 aaPredicted RBP20.03■□□□□ 0.8
PNKP-215ENST00000600910 SLC22A15Q8IZD6 547 aa20.03■□□□□ 0.8
PNKP-215ENST00000600910 FSTL5Q8N475 847 aaPredicted RBP20.03■□□□□ 0.8
PNKP-215ENST00000600910 SPATA6LQ8N4H0 392 aa20.03■□□□□ 0.8
PNKP-215ENST00000600910 NKAPQ8N5F7 415 aaKnown RBP20.03■□□□□ 0.8
PNKP-215ENST00000600910 ACMSDQ8TDX5 336 aa20.03■□□□□ 0.8
PNKP-215ENST00000600910 CABS1Q96KC9 395 aa20.03■□□□□ 0.8
PNKP-215ENST00000600910 SH3GL2Q99962 352 aa20.03■□□□□ 0.8
PNKP-215ENST00000600910 GTPBP2Q9BX10 602 aaKnown RBP20.03■□□□□ 0.8
PNKP-215ENST00000600910 DPEP2Q9H4A9 486 aa20.03■□□□□ 0.8
PNKP-215ENST00000600910 PRDM8Q9NQV8 689 aa20.03■□□□□ 0.8
PNKP-215ENST00000600910 UCKL1Q9NWZ5 548 aa20.03■□□□□ 0.8
PNKP-215ENST00000600910 TBC1D29Q9UFV1 150 aa20.03■□□□□ 0.8
PNKP-215ENST00000600910 OPA1O60313 960 aa20.02■□□□□ 0.8
PNKP-215ENST00000600910 DFNA5O60443 496 aa20.02■□□□□ 0.8
PNKP-215ENST00000600910 CER1O95813 267 aa20.02■□□□□ 0.8
PNKP-215ENST00000600910 ENO3P13929 434 aaPredicted RBP20.02■□□□□ 0.8
PNKP-215ENST00000600910 KRT4P19013 534 aa20.02■□□□□ 0.8
PNKP-215ENST00000600910 CSHL1Q14406 222 aa20.02■□□□□ 0.8
PNKP-215ENST00000600910 SH2D5Q6ZV89 423 aa20.02■□□□□ 0.8
PNKP-215ENST00000600910 PIWIL4Q7Z3Z4 852 aaKnown RBP20.02■□□□□ 0.8
PNKP-215ENST00000600910 C4orf33Q8N1A6 199 aa20.02■□□□□ 0.8
PNKP-215ENST00000600910 GOLGA6L1Q8N7Z2 621 aa20.02■□□□□ 0.8
PNKP-215ENST00000600910 SPDYE1Q8NFV5 336 aaPredicted RBP20.02■□□□□ 0.8
PNKP-215ENST00000600910 OR2I1PQ8NGU4 316 aa20.02■□□□□ 0.8
PNKP-215ENST00000600910 SKA2Q8WVK7 121 aaPredicted RBP20.02■□□□□ 0.8
PNKP-215ENST00000600910 UBXN10Q96LJ8 280 aa20.02■□□□□ 0.8
PNKP-215ENST00000600910 STMN4Q9H169 189 aaPredicted RBP20.02■□□□□ 0.8
PNKP-215ENST00000600910 OR52A5Q9H2C5 316 aa20.02■□□□□ 0.8
PNKP-215ENST00000600910 TAAR2Q9P1P5 351 aa20.02■□□□□ 0.8
PNKP-215ENST00000600910 WDR37Q9Y2I8 494 aa20.02■□□□□ 0.8
PNKP-215ENST00000600910 PDZK1P1A8MUH7 402 aa20.02■□□□□ 0.79
PNKP-215ENST00000600910 EIF3FO00303 357 aaPredicted RBP20.02■□□□□ 0.79
PNKP-215ENST00000600910 ZNF806P0C7X5 589 aa20.02■□□□□ 0.79
PNKP-215ENST00000600910 DLG1Q12959 904 aa20.02■□□□□ 0.79
PNKP-215ENST00000600910 GKN2Q86XP6 184 aa20.02■□□□□ 0.79
PNKP-215ENST00000600910 CENPLQ8N0S6 344 aaPredicted RBP20.02■□□□□ 0.79
PNKP-215ENST00000600910 KCTD4Q8WVF5 259 aa20.02■□□□□ 0.79
PNKP-215ENST00000600910 ARL8AQ96BM9 186 aa20.02■□□□□ 0.79
PNKP-215ENST00000600910 UNKQ9C0B0 810 aaKnown RBP20.02■□□□□ 0.79
PNKP-215ENST00000600910 WWP1Q9H0M0 922 aa20.02■□□□□ 0.79
PNKP-215ENST00000600910 NCDNQ9UBB6 729 aa20.02■□□□□ 0.79
PNKP-215ENST00000600910 DOLKQ9UPQ8 538 aa20.02■□□□□ 0.79
PNKP-215ENST00000600910 LNP1A1A4G5 178 aa20.01■□□□□ 0.79
PNKP-215ENST00000600910 EML2O95834 649 aa20.01■□□□□ 0.79
PNKP-215ENST00000600910 TOP3BO95985 862 aaKnown RBP20.01■□□□□ 0.79
PNKP-215ENST00000600910 SLC35G4P0C7Q5 338 aa20.01■□□□□ 0.79
PNKP-215ENST00000600910 BRAFP15056 766 aa20.01■□□□□ 0.79
PNKP-215ENST00000600910 EPHA8P29322 1005 aaPredicted RBP20.01■□□□□ 0.79
PNKP-215ENST00000600910 SLC26A3P40879 764 aa20.01■□□□□ 0.79
PNKP-215ENST00000600910 CCNFP41002 786 aa20.01■□□□□ 0.79
PNKP-215ENST00000600910 SPEM2Q0P670 501 aa20.01■□□□□ 0.79
PNKP-215ENST00000600910 LRRC8EQ6NSJ5 796 aa20.01■□□□□ 0.79
PNKP-215ENST00000600910 CYHR1Q6ZMK1 362 aa20.01■□□□□ 0.79
PNKP-215ENST00000600910 WDR87Q6ZQQ6 2873 aa20.01■□□□□ 0.79
PNKP-215ENST00000600910 EXOC3L1Q86VI1 746 aa20.01■□□□□ 0.79
PNKP-215ENST00000600910 MYO1HQ8N1T3 1032 aa20.01■□□□□ 0.79
PNKP-215ENST00000600910 PLD6Q8N2A8 252 aaKnown RBP20.01■□□□□ 0.79
PNKP-215ENST00000600910 NXNL1Q96CM4 212 aa20.01■□□□□ 0.79
PNKP-215ENST00000600910 PDLIM5Q96HC4 596 aaKnown RBP20.01■□□□□ 0.79
PNKP-215ENST00000600910 SENP1Q9P0U3 644 aa20.01■□□□□ 0.79
PNKP-215ENST00000600910 PCOLCE2Q9UKZ9 415 aa20.01■□□□□ 0.79
PNKP-215ENST00000600910 NOVA2Q9UNW9 492 aaKnown RBP20.01■□□□□ 0.79
PNKP-215ENST00000600910 RUVBL2Q9Y230 463 aaKnown RBP20.01■□□□□ 0.79
PNKP-215ENST00000600910 RALGAPA1Q6GYQ0 2036 aa20■□□□□ 0.79
PNKP-215ENST00000600910 A6NCN8 305 aa20■□□□□ 0.79
PNKP-215ENST00000600910 LMO7DNF2Z398 122 aa20■□□□□ 0.79
PNKP-215ENST00000600910 YY2O15391 372 aa20■□□□□ 0.79
PNKP-215ENST00000600910 YKT6O15498 198 aa20■□□□□ 0.79
PNKP-215ENST00000600910 LTA4HP09960 611 aaKnown RBP20■□□□□ 0.79
PNKP-215ENST00000600910 CCT8P50990 548 aa20■□□□□ 0.79
PNKP-215ENST00000600910 ATXN3P54252 364 aaPredicted RBP20■□□□□ 0.79
PNKP-215ENST00000600910 CLCA4Q14CN2 919 aa20■□□□□ 0.79
PNKP-215ENST00000600910 SF3A2Q15428 464 aaKnown RBP20■□□□□ 0.79
PNKP-215ENST00000600910 UAP1L1Q3KQV9 507 aa20■□□□□ 0.79
PNKP-215ENST00000600910 NEK10Q6ZWH5 1172 aa20■□□□□ 0.79
PNKP-215ENST00000600910 CLEC14AQ86T13 490 aa20■□□□□ 0.79
PNKP-215ENST00000600910 PDZD3Q86UT5 571 aa20■□□□□ 0.79
PNKP-215ENST00000600910 SDR16C5Q8N3Y7 309 aa20■□□□□ 0.79
PNKP-215ENST00000600910 SLC25A45Q8N413 288 aa20■□□□□ 0.79
PNKP-215ENST00000600910 MINDY1Q8N5J2 469 aa20■□□□□ 0.79
PNKP-215ENST00000600910 FAM46DQ8NEK8 389 aa20■□□□□ 0.79
PNKP-215ENST00000600910 RMDN2Q96LZ7 410 aa20■□□□□ 0.79
PNKP-215ENST00000600910 SMC6Q96SB8 1091 aa20■□□□□ 0.79
PNKP-215ENST00000600910 DERL2Q9GZP9 239 aa20■□□□□ 0.79
PNKP-215ENST00000600910 IGSF5Q9NSI5 407 aa20■□□□□ 0.79
PNKP-215ENST00000600910 IFRD1O00458 451 aaPredicted RBP19.99■□□□□ 0.79
PNKP-215ENST00000600910 KLHL2O95198 593 aa19.99■□□□□ 0.79
PNKP-215ENST00000600910 SYF2O95926 243 aaKnown RBP19.99■□□□□ 0.79
PNKP-215ENST00000600910 MPC1LP0DKB6 136 aa19.99■□□□□ 0.79
PNKP-215ENST00000600910 COL6A2P12110 1019 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms