RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 C2orf15Q8WU43 125 aaKnown RBP19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 CLPBQ9H078 707 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 RHBDL2Q9NX52 303 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 PRSS21Q9Y6M0 314 aa19.88■□□□□ 0.77
SHKBP1-225ENST00000600733 FZD6O60353 706 aa19.87■□□□□ 0.77
SHKBP1-225ENST00000600733 NBNO60934 754 aa19.87■□□□□ 0.77
SHKBP1-225ENST00000600733 KCNH1O95259 989 aa19.87■□□□□ 0.77
SHKBP1-225ENST00000600733 HLCSP50747 726 aa19.87■□□□□ 0.77
SHKBP1-225ENST00000600733 HMGCS1Q01581 520 aa19.87■□□□□ 0.77
SHKBP1-225ENST00000600733 DAG1Q14118 895 aa19.87■□□□□ 0.77
SHKBP1-225ENST00000600733 PHKG1Q16816 387 aa19.87■□□□□ 0.77
SHKBP1-225ENST00000600733 FAM174BQ3ZCQ3 159 aa19.87■□□□□ 0.77
SHKBP1-225ENST00000600733 FGD3Q5JSP0 725 aa19.87■□□□□ 0.77
SHKBP1-225ENST00000600733 OR10A6Q8NH74 314 aa19.87■□□□□ 0.77
SHKBP1-225ENST00000600733 FBXO30Q8TB52 745 aa19.87■□□□□ 0.77
SHKBP1-225ENST00000600733 SLC13A3Q8WWT9 602 aa19.87■□□□□ 0.77
SHKBP1-225ENST00000600733 BHMTQ93088 406 aa19.87■□□□□ 0.77
SHKBP1-225ENST00000600733 TM6SF2Q9BZW4 377 aa19.87■□□□□ 0.77
SHKBP1-225ENST00000600733 ZFP14Q9HCL3 533 aa19.87■□□□□ 0.77
SHKBP1-225ENST00000600733 LTB4R2Q9NPC1 389 aa19.87■□□□□ 0.77
SHKBP1-225ENST00000600733 CDH7Q9ULB5 785 aa19.87■□□□□ 0.77
SHKBP1-225ENST00000600733 PCDHB1Q9Y5F3 818 aa19.87■□□□□ 0.77
SHKBP1-225ENST00000600733 H0Y626 953 aa19.87■□□□□ 0.77
SHKBP1-225ENST00000600733 K7ERQ8 282 aa19.87■□□□□ 0.77
SHKBP1-225ENST00000600733 PRSS23O95084 383 aa19.87■□□□□ 0.77
SHKBP1-225ENST00000600733 TRIM16O95361 564 aa19.87■□□□□ 0.77
SHKBP1-225ENST00000600733 HMGA1P17096 107 aaKnown RBP19.87■□□□□ 0.77
SHKBP1-225ENST00000600733 EEF1B2P24534 225 aaKnown RBP19.87■□□□□ 0.77
SHKBP1-225ENST00000600733 GGT5P36269 586 aa19.87■□□□□ 0.77
SHKBP1-225ENST00000600733 MAPK10P53779 464 aa19.87■□□□□ 0.77
SHKBP1-225ENST00000600733 CHRNB3Q05901 458 aa19.87■□□□□ 0.77
SHKBP1-225ENST00000600733 NKG7Q16617 165 aa19.87■□□□□ 0.77
SHKBP1-225ENST00000600733 ELMSAN1Q6PJG2 1045 aa19.87■□□□□ 0.77
SHKBP1-225ENST00000600733 OR2T12Q8NG77 320 aa19.87■□□□□ 0.77
SHKBP1-225ENST00000600733 ZNF420Q8TAQ5 688 aaPredicted RBP19.87■□□□□ 0.77
SHKBP1-225ENST00000600733 DOK1Q99704 481 aa19.87■□□□□ 0.77
SHKBP1-225ENST00000600733 EGFL8Q99944 293 aa19.87■□□□□ 0.77
SHKBP1-225ENST00000600733 UTS2RQ9UKP6 389 aa19.87■□□□□ 0.77
SHKBP1-225ENST00000600733 PIKFYVEQ9Y2I7 2098 aa19.86■□□□□ 0.77
SHKBP1-225ENST00000600733 GAPDHSO14556 408 aaPredicted RBP19.86■□□□□ 0.77
SHKBP1-225ENST00000600733 CD247P20963 164 aa19.86■□□□□ 0.77
SHKBP1-225ENST00000600733 SREBF2Q12772 1141 aa19.86■□□□□ 0.77
SHKBP1-225ENST00000600733 C16orf72Q14CZ0 275 aa19.86■□□□□ 0.77
SHKBP1-225ENST00000600733 SGO1Q5FBB7 561 aa19.86■□□□□ 0.77
SHKBP1-225ENST00000600733 LRRC8DQ7L1W4 858 aa19.86■□□□□ 0.77
SHKBP1-225ENST00000600733 LEMD2Q8NC56 503 aa19.86■□□□□ 0.77
SHKBP1-225ENST00000600733 PDZD8Q8NEN9 1154 aa19.86■□□□□ 0.77
SHKBP1-225ENST00000600733 OR8J3Q8NGG0 315 aa19.86■□□□□ 0.77
SHKBP1-225ENST00000600733 GTF2H4Q92759 462 aa19.86■□□□□ 0.77
SHKBP1-225ENST00000600733 ABTB1Q969K4 478 aaPredicted RBP19.86■□□□□ 0.77
SHKBP1-225ENST00000600733 THUMPD3Q9BV44 507 aaKnown RBP19.86■□□□□ 0.77
SHKBP1-225ENST00000600733 RNF186Q9NXI6 227 aa19.86■□□□□ 0.77
SHKBP1-225ENST00000600733 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.86■□□□□ 0.77
SHKBP1-225ENST00000600733 TBL1XO60907 577 aa19.86■□□□□ 0.77
SHKBP1-225ENST00000600733 SEC24AO95486 1093 aa19.86■□□□□ 0.77
SHKBP1-225ENST00000600733 THRBP10828 461 aa19.86■□□□□ 0.77
SHKBP1-225ENST00000600733 COL6A1P12109 1028 aa19.86■□□□□ 0.77
SHKBP1-225ENST00000600733 TTKP33981 857 aa19.86■□□□□ 0.77
SHKBP1-225ENST00000600733 ELAVL2Q12926 359 aaKnown RBP19.86■□□□□ 0.77
SHKBP1-225ENST00000600733 LAPTM5Q13571 262 aa19.86■□□□□ 0.77
SHKBP1-225ENST00000600733 GPNMBQ14956 572 aa19.86■□□□□ 0.77
SHKBP1-225ENST00000600733 HS3ST5Q8IZT8 346 aa19.86■□□□□ 0.77
SHKBP1-225ENST00000600733 KRTCAP2Q8N6L1 136 aa19.86■□□□□ 0.77
SHKBP1-225ENST00000600733 GFM2Q969S9 779 aaKnown RBP19.86■□□□□ 0.77
SHKBP1-225ENST00000600733 PPP3R2Q96LZ3 170 aa19.86■□□□□ 0.77
SHKBP1-225ENST00000600733 FEM1AQ9BSK4 669 aa19.86■□□□□ 0.77
SHKBP1-225ENST00000600733 TBCDQ9BTW9 1192 aa19.86■□□□□ 0.77
SHKBP1-225ENST00000600733 ING2Q9H160 280 aa19.86■□□□□ 0.77
SHKBP1-225ENST00000600733 LRFN2Q9ULH4 789 aa19.86■□□□□ 0.77
SHKBP1-225ENST00000600733 IFRD1O00458 451 aaPredicted RBP19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 GMNNO75496 209 aa19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 SLC25A14O95258 325 aaPredicted RBP19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 GLUD1P00367 558 aa19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 ZNF7P17097 686 aaPredicted RBP19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 SPANXN4Q5MJ08 99 aa19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 ZNF548Q8NEK5 533 aaPredicted RBP19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 MYO19Q96H55 970 aa19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 ASB8Q9H765 288 aa19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 ELAC1Q9H777 363 aaKnown RBP19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 SMURF2Q9HAU4 748 aa19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 MAGEE1Q9HCI5 957 aa19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 NMRK2Q9NPI5 230 aa19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 SLC25A37Q9NYZ2 338 aa19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 KLQ9UEF7 1012 aa19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 LIMD1Q9UGP4 676 aa19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 VPS51Q9UID3 782 aa19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 ANGPTL3Q9Y5C1 460 aa19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 GSTA4O15217 222 aa19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 UGT1A1P22309 533 aa19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 UGT1A4P22310 534 aa19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 UGT1A3P35503 534 aa19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 UGT1A5P35504 534 aa19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 MAPKAPK3Q16644 382 aa19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 CERS6Q6ZMG9 384 aa19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 MSRB3Q8IXL7 192 aa19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 LIX1Q8N485 282 aa19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 WFDC5Q8TCV5 224 aa19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 PIH1D2Q8WWB5 315 aa19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 SGCDQ92629 289 aa19.85■□□□□ 0.77
SHKBP1-225ENST00000600733 THAP11Q96EK4 314 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms