RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 GPC4O75487 556 aa15.36■□□□□ 0.05
RPS28-203ENST00000600659 KRT37O76014 449 aa15.36■□□□□ 0.05
RPS28-203ENST00000600659 FTH1P02794 183 aa15.36■□□□□ 0.05
RPS28-203ENST00000600659 F7P08709 466 aaPredicted RBP15.36■□□□□ 0.05
RPS28-203ENST00000600659 ANKRD34CP0C6C1 535 aa15.36■□□□□ 0.05
RPS28-203ENST00000600659 OR56A5P0C7T3 313 aa15.36■□□□□ 0.05
RPS28-203ENST00000600659 FGF3P11487 239 aaPredicted RBP15.36■□□□□ 0.05
RPS28-203ENST00000600659 RPS3P23396 243 aaKnown RBP eCLIP15.36■□□□□ 0.054e-9■■■■□ 19.5
RPS28-203ENST00000600659 CD151P48509 253 aa15.36■□□□□ 0.05
RPS28-203ENST00000600659 TTPAP49638 278 aa15.36■□□□□ 0.05
RPS28-203ENST00000600659 DR1Q01658 176 aa15.36■□□□□ 0.05
RPS28-203ENST00000600659 HIBCHQ6NVY1 386 aaPredicted RBP15.36■□□□□ 0.05
RPS28-203ENST00000600659 SYDE1Q6ZW31 735 aaPredicted RBP15.36■□□□□ 0.05
RPS28-203ENST00000600659 CENPUQ71F23 418 aa15.36■□□□□ 0.05
RPS28-203ENST00000600659 PDZD3Q86UT5 571 aa15.36■□□□□ 0.05
RPS28-203ENST00000600659 VRK3Q8IV63 474 aa15.36■□□□□ 0.05
RPS28-203ENST00000600659 ZFPM2Q8WW38 1151 aa15.36■□□□□ 0.05
RPS28-203ENST00000600659 ELMO1Q92556 727 aa15.36■□□□□ 0.05
RPS28-203ENST00000600659 LPGAT1Q92604 370 aa15.36■□□□□ 0.05
RPS28-203ENST00000600659 C9orf72Q96LT7 481 aa15.36■□□□□ 0.05
RPS28-203ENST00000600659 PWWP2AQ96N64 755 aa15.36■□□□□ 0.05
RPS28-203ENST00000600659 BIRC8Q96P09 236 aa15.36■□□□□ 0.05
RPS28-203ENST00000600659 THSD1Q9NS62 852 aa15.36■□□□□ 0.05
RPS28-203ENST00000600659 SIDT1Q9NXL6 827 aaKnown RBP15.36■□□□□ 0.05
RPS28-203ENST00000600659 FOXJ2Q9P0K8 574 aa15.36■□□□□ 0.05
RPS28-203ENST00000600659 ACSL6Q9UKU0 697 aa15.36■□□□□ 0.05
RPS28-203ENST00000600659 SSUH2Q9Y2M2 353 aa15.36■□□□□ 0.05
RPS28-203ENST00000600659 ITPR1Q14643 2758 aa15.35■□□□□ 0.05
RPS28-203ENST00000600659 ZFYVE26Q68DK2 2539 aa15.35■□□□□ 0.05
RPS28-203ENST00000600659 CAPN5O15484 640 aaPredicted RBP15.35■□□□□ 0.05
RPS28-203ENST00000600659 KIF1CO43896 1103 aaKnown RBP15.35■□□□□ 0.05
RPS28-203ENST00000600659 USP1O94782 785 aa15.35■□□□□ 0.05
RPS28-203ENST00000600659 SEC31AO94979 1220 aaKnown RBP15.35■□□□□ 0.05
RPS28-203ENST00000600659 ITGB6P18564 788 aa15.35■□□□□ 0.05
RPS28-203ENST00000600659 OGNP20774 298 aaKnown RBP15.35■□□□□ 0.05
RPS28-203ENST00000600659 ITPKBP27987 946 aa15.35■□□□□ 0.05
RPS28-203ENST00000600659 RBMS1P29558 406 aaKnown RBP15.35■□□□□ 0.05
RPS28-203ENST00000600659 SLC5A2P31639 672 aa15.35■□□□□ 0.05
RPS28-203ENST00000600659 PAFAH1B1P43034 410 aa15.35■□□□□ 0.05
RPS28-203ENST00000600659 PCBP4P57723 403 aaKnown RBP15.35■□□□□ 0.05
RPS28-203ENST00000600659 MRPS25P82663 173 aaKnown RBP15.35■□□□□ 0.05
RPS28-203ENST00000600659 DHX9Q08211 1270 aaKnown RBP15.35■□□□□ 0.05
RPS28-203ENST00000600659 BOP1Q14137 746 aaKnown RBP15.35■□□□□ 0.05
RPS28-203ENST00000600659 DHX34Q14147 1143 aaKnown RBP15.35■□□□□ 0.05
RPS28-203ENST00000600659 ZNF789Q5FWF6 425 aa15.35■□□□□ 0.05
RPS28-203ENST00000600659 CASC4Q6P4E1 433 aa15.35■□□□□ 0.05
RPS28-203ENST00000600659 CILP2Q8IUL8 1156 aa15.35■□□□□ 0.05
RPS28-203ENST00000600659 IGDCC3Q8IVU1 814 aa15.35■□□□□ 0.05
RPS28-203ENST00000600659 UNC5BQ8IZJ1 945 aa15.35■□□□□ 0.05
RPS28-203ENST00000600659 KRT222Q8N1A0 295 aa15.35■□□□□ 0.05
RPS28-203ENST00000600659 SPATA4Q8NEY3 305 aa15.35■□□□□ 0.05
RPS28-203ENST00000600659 RUNDC3BQ96NL0 473 aa15.35■□□□□ 0.05
RPS28-203ENST00000600659 KRT12Q99456 494 aa15.35■□□□□ 0.05
RPS28-203ENST00000600659 CARD6Q9BX69 1037 aa15.35■□□□□ 0.05
RPS28-203ENST00000600659 TWSG1Q9GZX9 223 aa15.35■□□□□ 0.05
RPS28-203ENST00000600659 KLHL3Q9UH77 587 aa15.35■□□□□ 0.05
RPS28-203ENST00000600659 RPS6KL1Q9Y6S9 549 aa15.35■□□□□ 0.05
RPS28-203ENST00000600659 OR5K3A6NET4 321 aa15.34■□□□□ 0.05
RPS28-203ENST00000600659 A8MU76 341 aa15.34■□□□□ 0.05
RPS28-203ENST00000600659 PRAMEF10O60809 474 aa15.34■□□□□ 0.05
RPS28-203ENST00000600659 JMJD7P0C870 316 aa15.34■□□□□ 0.05
RPS28-203ENST00000600659 TPBGLP0DKB5 382 aa15.34■□□□□ 0.05
RPS28-203ENST00000600659 AMD1P17707 334 aa15.34■□□□□ 0.05
RPS28-203ENST00000600659 AOAHP28039 575 aa15.34■□□□□ 0.05
RPS28-203ENST00000600659 CASQ1P31415 396 aa15.34■□□□□ 0.05
RPS28-203ENST00000600659 MORF4L2Q15014 288 aa15.34■□□□□ 0.05
RPS28-203ENST00000600659 BRD3Q15059 726 aa15.34■□□□□ 0.05
RPS28-203ENST00000600659 SNAP47Q5SQN1 464 aa15.34■□□□□ 0.05
RPS28-203ENST00000600659 ZNF572Q7Z3I7 529 aaPredicted RBP15.34■□□□□ 0.05
RPS28-203ENST00000600659 PRSS42Q7Z5A4 293 aa15.34■□□□□ 0.05
RPS28-203ENST00000600659 PLXDC1Q8IUK5 500 aa15.34■□□□□ 0.05
RPS28-203ENST00000600659 SPNS2Q8IVW8 549 aa15.34■□□□□ 0.05
RPS28-203ENST00000600659 AGBL5Q8NDL9 886 aa15.34■□□□□ 0.05
RPS28-203ENST00000600659 PHC3Q8NDX5 983 aa15.34■□□□□ 0.05
RPS28-203ENST00000600659 TFGQ92734 400 aaPredicted RBP15.34■□□□□ 0.05
RPS28-203ENST00000600659 USP7Q93009 1102 aa15.34■□□□□ 0.05
RPS28-203ENST00000600659 CRELD1Q96HD1 420 aa15.34■□□□□ 0.05
RPS28-203ENST00000600659 DCBLD2Q96PD2 775 aa15.34■□□□□ 0.05
RPS28-203ENST00000600659 TGM7Q96PF1 710 aa15.34■□□□□ 0.05
RPS28-203ENST00000600659 TTC1Q99614 292 aa15.34■□□□□ 0.05
RPS28-203ENST00000600659 SAMD15Q9P1V8 674 aa15.34■□□□□ 0.05
RPS28-203ENST00000600659 ANAPC5Q9UJX4 755 aa15.34■□□□□ 0.05
RPS28-203ENST00000600659 MED16Q9Y2X0 877 aa15.34■□□□□ 0.05
RPS28-203ENST00000600659 PCDHGA3Q9Y5H0 932 aa15.34■□□□□ 0.05
RPS28-203ENST00000600659 SPTBP11277 2137 aa15.33■□□□□ 0.05
RPS28-203ENST00000600659 MAGEB16A2A368 324 aa15.33■□□□□ 0.04
RPS28-203ENST00000600659 B4E171 279 aa15.33■□□□□ 0.04
RPS28-203ENST00000600659 NVLO15381 856 aaKnown RBP15.33■□□□□ 0.04
RPS28-203ENST00000600659 RAD51CO43502 376 aa15.33■□□□□ 0.04
RPS28-203ENST00000600659 S1PR4O95977 384 aa15.33■□□□□ 0.04
RPS28-203ENST00000600659 TSPAN7P41732 249 aa15.33■□□□□ 0.04
RPS28-203ENST00000600659 RPL21P46778 160 aaKnown RBP15.33■□□□□ 0.04
RPS28-203ENST00000600659 ITGA8P53708 1063 aa15.33■□□□□ 0.04
RPS28-203ENST00000600659 MAPK10P53779 464 aa15.33■□□□□ 0.04
RPS28-203ENST00000600659 ADARP55265 1226 aaKnown RBP15.33■□□□□ 0.04
RPS28-203ENST00000600659 C2orf54Q08AI8 447 aa15.33■□□□□ 0.04
RPS28-203ENST00000600659 GBX1Q14549 363 aa15.33■□□□□ 0.04
RPS28-203ENST00000600659 CRYMQ14894 314 aa15.33■□□□□ 0.04
RPS28-203ENST00000600659 MRNIPQ6NTE8 343 aa15.33■□□□□ 0.04
RPS28-203ENST00000600659 NEPROQ6NW34 567 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms