RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 SAMD15Q9P1V8 674 aa15.81■□□□□ 0.12
LSM4-206ENST00000600289 ASIC3Q9UHC3 531 aa15.81■□□□□ 0.12
LSM4-206ENST00000600289 ANAPC5Q9UJX4 755 aa15.81■□□□□ 0.12
LSM4-206ENST00000600289 PSMD13Q9UNM6 376 aa15.81■□□□□ 0.12
LSM4-206ENST00000600289 LOXL2Q9Y4K0 774 aa15.81■□□□□ 0.12
LSM4-206ENST00000600289 PCDHGA7Q9Y5G6 932 aa15.81■□□□□ 0.12
LSM4-206ENST00000600289 HEBP2Q9Y5Z4 205 aa15.81■□□□□ 0.12
LSM4-206ENST00000600289 PRSS21Q9Y6M0 314 aa15.81■□□□□ 0.12
LSM4-206ENST00000600289 ERVH48-1M5A8F1 160 aa15.8■□□□□ 0.12
LSM4-206ENST00000600289 SMAPO00193 183 aa15.8■□□□□ 0.12
LSM4-206ENST00000600289 TOX3O15405 576 aaPredicted RBP15.8■□□□□ 0.12
LSM4-206ENST00000600289 UBXN7O94888 489 aa15.8■□□□□ 0.12
LSM4-206ENST00000600289 C9P02748 559 aa15.8■□□□□ 0.12
LSM4-206ENST00000600289 ANKRD34CP0C6C1 535 aa15.8■□□□□ 0.12
LSM4-206ENST00000600289 PAMP19021 973 aa15.8■□□□□ 0.12
LSM4-206ENST00000600289 NDUFS1P28331 727 aa15.8■□□□□ 0.12
LSM4-206ENST00000600289 CAPZBP47756 277 aa15.8■□□□□ 0.12
LSM4-206ENST00000600289 ARCN1P48444 511 aaKnown RBP15.8■□□□□ 0.12
LSM4-206ENST00000600289 DR1Q01658 176 aa15.8■□□□□ 0.12
LSM4-206ENST00000600289 PLOD1Q02809 727 aaPredicted RBP15.8■□□□□ 0.12
LSM4-206ENST00000600289 C16orf72Q14CZ0 275 aa15.8■□□□□ 0.12
LSM4-206ENST00000600289 TYSND1Q2T9J0 566 aa15.8■□□□□ 0.12
LSM4-206ENST00000600289 PHF19Q5T6S3 580 aa15.8■□□□□ 0.12
LSM4-206ENST00000600289 TMEM135Q86UB9 458 aa15.8■□□□□ 0.12
LSM4-206ENST00000600289 LRRC6Q86X45 466 aa15.8■□□□□ 0.12
LSM4-206ENST00000600289 JAMLQ86YT9 394 aa15.8■□□□□ 0.12
LSM4-206ENST00000600289 PLXDC1Q8IUK5 500 aa15.8■□□□□ 0.12
LSM4-206ENST00000600289 C17orf53Q8N3J3 647 aaPredicted RBP15.8■□□□□ 0.12
LSM4-206ENST00000600289 LILRA3Q8N6C8 439 aaPredicted RBP15.8■□□□□ 0.12
LSM4-206ENST00000600289 FGF11Q92914 225 aa15.8■□□□□ 0.12
LSM4-206ENST00000600289 SIGLEC10Q96LC7 697 aa15.8■□□□□ 0.12
LSM4-206ENST00000600289 C12orf66Q96MD2 445 aa15.8■□□□□ 0.12
LSM4-206ENST00000600289 TCF12Q99081 682 aa15.8■□□□□ 0.12
LSM4-206ENST00000600289 P2RY12Q9H244 342 aa15.8■□□□□ 0.12
LSM4-206ENST00000600289 AKAP7Q9P0M2 348 aaPredicted RBP15.8■□□□□ 0.12
LSM4-206ENST00000600289 TMEM9Q9P0T7 183 aa15.8■□□□□ 0.12
LSM4-206ENST00000600289 MARCH4Q9P2E8 410 aaPredicted RBP15.8■□□□□ 0.12
LSM4-206ENST00000600289 EPHA6Q9UF33 1036 aa15.8■□□□□ 0.12
LSM4-206ENST00000600289 ACSL6Q9UKU0 697 aa15.8■□□□□ 0.12
LSM4-206ENST00000600289 NBPF19A0A087WUL8 3843 aa15.79■□□□□ 0.12
LSM4-206ENST00000600289 PMS2P1A4D2B8 440 aa15.79■□□□□ 0.12
LSM4-206ENST00000600289 B8ZZF3 427 aa15.79■□□□□ 0.12
LSM4-206ENST00000600289 OR1I1O60431 355 aa15.79■□□□□ 0.12
LSM4-206ENST00000600289 USP1O94782 785 aa15.79■□□□□ 0.12
LSM4-206ENST00000600289 OGNP20774 298 aaKnown RBP15.79■□□□□ 0.12
LSM4-206ENST00000600289 RPS3P23396 243 aaKnown RBP eCLIP15.79■□□□□ 0.123e-7■□□□□ 8.1
LSM4-206ENST00000600289 CASQ1P31415 396 aa15.79■□□□□ 0.12
LSM4-206ENST00000600289 TERF1P54274 439 aa15.79■□□□□ 0.12
LSM4-206ENST00000600289 PCBP4P57723 403 aaKnown RBP15.79■□□□□ 0.12
LSM4-206ENST00000600289 RNF187Q5TA31 235 aaPredicted RBP15.79■□□□□ 0.12
LSM4-206ENST00000600289 MRNIPQ6NTE8 343 aa15.79■□□□□ 0.12
LSM4-206ENST00000600289 ZNF449Q6P9G9 518 aa15.79■□□□□ 0.12
LSM4-206ENST00000600289 ARHGAP22Q7Z5H3 698 aa15.79■□□□□ 0.12
LSM4-206ENST00000600289 AGGF1Q8N302 714 aaeCLIP15.79■□□□□ 0.12
LSM4-206ENST00000600289 CARD6Q9BX69 1037 aa15.79■□□□□ 0.12
LSM4-206ENST00000600289 TSSK1BQ9BXA7 367 aa15.79■□□□□ 0.12
LSM4-206ENST00000600289 KIR3DX1Q9H7L2 352 aa15.79■□□□□ 0.12
LSM4-206ENST00000600289 IMP3Q9NV31 184 aaKnown RBP15.79■□□□□ 0.12
LSM4-206ENST00000600289 COLEC10Q9Y6Z7 277 aa15.79■□□□□ 0.12
LSM4-206ENST00000600289 PRAMEF33A0A0G2JMD5 474 aa15.78■□□□□ 0.12
LSM4-206ENST00000600289 SLC5A10A0PJK1 596 aa15.78■□□□□ 0.12
LSM4-206ENST00000600289 GOLGA8MH3BSY2 632 aa15.78■□□□□ 0.12
LSM4-206ENST00000600289 PRMT5O14744 637 aaPredicted RBP15.78■□□□□ 0.12
LSM4-206ENST00000600289 TNFSF15O95150 251 aa15.78■□□□□ 0.12
LSM4-206ENST00000600289 VAPBO95292 243 aa15.78■□□□□ 0.12
LSM4-206ENST00000600289 JMJD7P0C870 316 aa15.78■□□□□ 0.12
LSM4-206ENST00000600289 ADARP55265 1226 aaKnown RBP15.78■□□□□ 0.12
LSM4-206ENST00000600289 MORF4L2Q15014 288 aa15.78■□□□□ 0.12
LSM4-206ENST00000600289 ANKRD20A4Q4UJ75 823 aa15.78■□□□□ 0.12
LSM4-206ENST00000600289 IZUMO3Q5VZ72 239 aa15.78■□□□□ 0.12
LSM4-206ENST00000600289 CASC4Q6P4E1 433 aa15.78■□□□□ 0.12
LSM4-206ENST00000600289 KLHL35Q6PF15 583 aa15.78■□□□□ 0.12
LSM4-206ENST00000600289 KLHL7Q8IXQ5 586 aa15.78■□□□□ 0.12
LSM4-206ENST00000600289 LMNTD2Q8IXW0 634 aa15.78■□□□□ 0.12
LSM4-206ENST00000600289 AGBL5Q8NDL9 886 aa15.78■□□□□ 0.12
LSM4-206ENST00000600289 SPDYE1Q8NFV5 336 aaPredicted RBP15.78■□□□□ 0.12
LSM4-206ENST00000600289 NCSTNQ92542 709 aa15.78■□□□□ 0.12
LSM4-206ENST00000600289 ELMO1Q92556 727 aa15.78■□□□□ 0.12
LSM4-206ENST00000600289 SLC24A2Q9UI40 661 aa15.78■□□□□ 0.12
LSM4-206ENST00000600289 ZCWPW2A0A1B0GU75 182 aa15.77■□□□□ 0.12
LSM4-206ENST00000600289 B4E171 279 aa15.77■□□□□ 0.12
LSM4-206ENST00000600289 IFRD1O00458 451 aaPredicted RBP15.77■□□□□ 0.12
LSM4-206ENST00000600289 NDC80O14777 642 aa15.77■□□□□ 0.12
LSM4-206ENST00000600289 PFDN6O15212 129 aa15.77■□□□□ 0.12
LSM4-206ENST00000600289 NVLO15381 856 aaKnown RBP15.77■□□□□ 0.12
LSM4-206ENST00000600289 RRP8O43159 456 aaKnown RBP15.77■□□□□ 0.12
LSM4-206ENST00000600289 POLBP06746 335 aa15.77■□□□□ 0.12
LSM4-206ENST00000600289 TSPAN7P41732 249 aa15.77■□□□□ 0.12
LSM4-206ENST00000600289 MAPK9P45984 424 aa15.77■□□□□ 0.12
LSM4-206ENST00000600289 CBLBQ13191 982 aa15.77■□□□□ 0.12
LSM4-206ENST00000600289 BOP1Q14137 746 aaKnown RBP15.77■□□□□ 0.12
LSM4-206ENST00000600289 DUS1LQ6P1R4 473 aaKnown RBP15.77■□□□□ 0.12
LSM4-206ENST00000600289 CES3Q6UWW8 571 aa15.77■□□□□ 0.12
LSM4-206ENST00000600289 SYT10Q6XYQ8 523 aa15.77■□□□□ 0.12
LSM4-206ENST00000600289 ZNF572Q7Z3I7 529 aaPredicted RBP15.77■□□□□ 0.12
LSM4-206ENST00000600289 PRSS42Q7Z5A4 293 aa15.77■□□□□ 0.12
LSM4-206ENST00000600289 SDCCAG8Q86SQ7 713 aaPredicted RBP15.77■□□□□ 0.12
LSM4-206ENST00000600289 RCBTB1Q8NDN9 531 aa15.77■□□□□ 0.12
LSM4-206ENST00000600289 ZNF248Q8NDW4 579 aa15.77■□□□□ 0.12
LSM4-206ENST00000600289 RSC1A1Q92681 617 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms