RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 TERB1Q8NA31 727 aa16.72■□□□□ 0.27
SHKBP1-216ENST00000598201 OR4F6Q8NGB9 312 aa16.72■□□□□ 0.27
SHKBP1-216ENST00000598201 SLC45A3Q96JT2 553 aa16.72■□□□□ 0.27
SHKBP1-216ENST00000598201 IPPKQ9H8X2 491 aa16.72■□□□□ 0.27
SHKBP1-216ENST00000598201 RDH14Q9HBH5 336 aa16.72■□□□□ 0.27
SHKBP1-216ENST00000598201 ZFP14Q9HCL3 533 aa16.72■□□□□ 0.27
SHKBP1-216ENST00000598201 MRGBPQ9NV56 204 aa16.72■□□□□ 0.27
SHKBP1-216ENST00000598201 THG1LQ9NWX6 298 aaKnown RBP16.72■□□□□ 0.27
SHKBP1-216ENST00000598201 NFKBIL1Q9UBC1 381 aaPredicted RBP16.72■□□□□ 0.27
SHKBP1-216ENST00000598201 UNC80Q8N2C7 3258 aa16.72■□□□□ 0.27
SHKBP1-216ENST00000598201 EDDM13A0A1B0GTR0 161 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 KATNA1O75449 491 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 PRNPP04156 253 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 SNRPB2P08579 225 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 NFKBIAP25963 317 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 ARL1P40616 181 aaPredicted RBP16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 PTDSS1P48651 473 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 HTR6P50406 440 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 TRAF3Q13114 568 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 BOP1Q14137 746 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 ZRSR2Q15696 482 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 SMAD2Q15796 467 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 KIF19Q2TAC6 998 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 REP15Q6BDI9 236 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 SULT1C3Q6IMI6 304 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 ERAP2Q6P179 960 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 BNC2Q6ZN30 1099 aaPredicted RBP16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 DDHD1Q8NEL9 900 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 PIP4K2CQ8TBX8 421 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 CHFRQ96EP1 664 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 FAM129BQ96TA1 746 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 ZSCAN5AQ9BUG6 496 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 CD244Q9BZW8 370 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 TMEM245Q9H330 911 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 WWOXQ9NZC7 414 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 STX18Q9P2W9 335 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 HCN2Q9UL51 889 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 CDH7Q9ULB5 785 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 PRPF19Q9UMS4 504 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 PDE10AQ9Y233 779 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 COQ6Q9Y2Z9 468 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 OR2AG2A6NM03 316 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 CHEK2O96017 543 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 CAPN1P07384 714 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 ACADVLP49748 655 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 THOP1P52888 689 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 DIO3P55073 304 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 STX1BP61266 288 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 FCHO2Q0JRZ9 810 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 EIF4HQ15056 248 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 MAPRE2Q15555 327 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 CCDC6Q16204 474 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 AAK1Q2M2I8 961 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 ZNF284Q2VY69 593 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 PIGGQ5H8A4 983 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 BTN2A2Q8WVV5 523 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 NRG4Q8WWG1 115 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 MRPL1Q9BYD6 325 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 CACNA2D2Q9NY47 1150 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 C15orf41Q9Y2V0 281 aa16.71■□□□□ 0.27
SHKBP1-216ENST00000598201 DOCK8Q8NF50 2099 aa16.7■□□□□ 0.26
SHKBP1-216ENST00000598201 TBC1D3BA6NDS4 549 aa16.7■□□□□ 0.26
SHKBP1-216ENST00000598201 C9JVG2 144 aa16.7■□□□□ 0.26
SHKBP1-216ENST00000598201 NUAK1O60285 661 aa16.7■□□□□ 0.26
SHKBP1-216ENST00000598201 VPS4BO75351 444 aa16.7■□□□□ 0.26
SHKBP1-216ENST00000598201 MSH3P20585 1137 aa16.7■□□□□ 0.26
SHKBP1-216ENST00000598201 ITGB7P26010 798 aa16.7■□□□□ 0.26
SHKBP1-216ENST00000598201 CDC16Q13042 620 aa16.7■□□□□ 0.26
SHKBP1-216ENST00000598201 STX5Q13190 355 aa16.7■□□□□ 0.26
SHKBP1-216ENST00000598201 RUNX3Q13761 415 aa16.7■□□□□ 0.26
SHKBP1-216ENST00000598201 CEACAM7Q14002 265 aa16.7■□□□□ 0.26
SHKBP1-216ENST00000598201 LRP8Q14114 963 aa16.7■□□□□ 0.26
SHKBP1-216ENST00000598201 ZXDCQ2QGD7 858 aaPredicted RBP16.7■□□□□ 0.26
SHKBP1-216ENST00000598201 OGFOD2Q6N063 350 aa16.7■□□□□ 0.26
SHKBP1-216ENST00000598201 EFL1Q7Z2Z2 1120 aaKnown RBP16.7■□□□□ 0.26
SHKBP1-216ENST00000598201 TMIEQ8NEW7 156 aa16.7■□□□□ 0.26
SHKBP1-216ENST00000598201 METTL6Q8TCB7 284 aa16.7■□□□□ 0.26
SHKBP1-216ENST00000598201 UBTD2Q8WUN7 234 aa16.7■□□□□ 0.26
SHKBP1-216ENST00000598201 OR8D1Q8WZ84 308 aa16.7■□□□□ 0.26
SHKBP1-216ENST00000598201 ATP6V1E2Q96A05 226 aa16.7■□□□□ 0.26
SHKBP1-216ENST00000598201 AP2M1Q96CW1 435 aa16.7■□□□□ 0.26
SHKBP1-216ENST00000598201 MYADMQ96S97 322 aa16.7■□□□□ 0.26
SHKBP1-216ENST00000598201 HBEGFQ99075 208 aa16.7■□□□□ 0.26
SHKBP1-216ENST00000598201 RAD18Q9NS91 495 aa16.7■□□□□ 0.26
SHKBP1-216ENST00000598201 TMEM202A6NGA9 273 aa16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 CFAP99D6REC4 459 aa16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 GJA4P35212 333 aa16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 MSX2P35548 267 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 RPIAP49247 311 aa16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 CCNG1P51959 295 aa16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 CTSCP53634 463 aa16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 SLC34A1Q06495 639 aa16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 ZNF423Q2M1K9 1284 aa16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 Q6ZSR9 355 aa16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 UBE2R2Q712K3 238 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 RNF148Q8N7C7 305 aa16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 SKA2Q8WVK7 121 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 ASB11Q8WXH4 323 aa16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 GLYATL1Q969I3 302 aa16.69■□□□□ 0.26
SHKBP1-216ENST00000598201 COQ10AQ96MF6 247 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms